Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: -
Assembly: GCA_963921185.1
Location: OY992532.1:232041222-232053974[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 1.7e-05 0.0046 19.4 1.1 3 23 208 228 206 228 0.97

2 26 4.3e-05 0.012 18.1 3.0 1 23 234 257 234 257 0.97

3 26 0.041 11 8.7 0.7 1 23 265 290 265 290 0.93

4 26 0.0002 0.054 16.0 0.2 1 23 301 323 301 323 0.96

5 26 6.5e-05 0.018 17.5 3.9 1 23 330 352 330 352 0.98

6 26 0.0034 0.94 12.1 1.4 1 23 358 380 358 380 0.97

7 26 0.00082 0.23 14.0 0.4 1 23 386 409 386 409 0.97

8 26 0.00075 0.21 14.2 2.2 1 23 415 437 415 437 0.96

9 26 2.6e-05 0.0071 18.8 3.4 1 23 443 465 443 465 0.97

10 26 4.9e-06 0.0013 21.1 0.5 2 23 663 684 662 684 0.97

11 26 1.9e-05 0.0054 19.2 0.3 1 23 690 713 690 713 0.97

12 26 0.0025 0.69 12.5 0.4 1 23 718 743 718 743 0.92

13 26 0.00047 0.13 14.8 0.3 1 23 758 780 758 780 0.95

14 26 0.016 4.5 10.0 8.3 1 23 787 809 787 809 0.96

15 26 0.0024 0.65 12.6 1.3 1 23 815 837 815 837 0.97

16 26 0.00011 0.03 16.8 0.3 1 23 843 866 843 866 0.97

17 26 0.0011 0.31 13.6 3.2 1 23 872 894 872 894 0.93

18 26 6.6e-05 0.018 17.5 1.3 2 23 1096 1117 1095 1117 0.97

19 26 0.00011 0.031 16.8 1.4 1 23 1123 1146 1123 1146 0.95

20 26 0.03 8.4 9.1 0.1 1 23 1154 1179 1154 1179 0.95

21 26 0.0021 0.58 12.8 0.3 1 23 1190 1212 1190 1212 0.96

22 26 0.13 34 7.2 4.2 1 23 1219 1241 1219 1241 0.97

23 26 0.00059 0.16 14.5 2.5 1 23 1247 1269 1247 1269 0.97

24 26 6.1e-05 0.017 17.6 1.1 1 23 1275 1298 1275 1298 0.97

25 26 0.00018 0.05 16.1 2.3 1 23 1304 1326 1304 1326 0.98

26 26 7.1e-05 0.019 17.4 4.8 1 23 1332 1354 1332 1354 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	1.7e-05	0.0046	19.4	1.1	3	23	208	228	206	228	0.97
2	26	4.3e-05	0.012	18.1	3.0	1	23	234	257	234	257	0.97
3	26	0.041	11	8.7	0.7	1	23	265	290	265	290	0.93
4	26	0.0002	0.054	16.0	0.2	1	23	301	323	301	323	0.96
5	26	6.5e-05	0.018	17.5	3.9	1	23	330	352	330	352	0.98
6	26	0.0034	0.94	12.1	1.4	1	23	358	380	358	380	0.97
7	26	0.00082	0.23	14.0	0.4	1	23	386	409	386	409	0.97
8	26	0.00075	0.21	14.2	2.2	1	23	415	437	415	437	0.96
9	26	2.6e-05	0.0071	18.8	3.4	1	23	443	465	443	465	0.97
10	26	4.9e-06	0.0013	21.1	0.5	2	23	663	684	662	684	0.97
11	26	1.9e-05	0.0054	19.2	0.3	1	23	690	713	690	713	0.97
12	26	0.0025	0.69	12.5	0.4	1	23	718	743	718	743	0.92
13	26	0.00047	0.13	14.8	0.3	1	23	758	780	758	780	0.95
14	26	0.016	4.5	10.0	8.3	1	23	787	809	787	809	0.96
15	26	0.0024	0.65	12.6	1.3	1	23	815	837	815	837	0.97
16	26	0.00011	0.03	16.8	0.3	1	23	843	866	843	866	0.97
17	26	0.0011	0.31	13.6	3.2	1	23	872	894	872	894	0.93
18	26	6.6e-05	0.018	17.5	1.3	2	23	1096	1117	1095	1117	0.97
19	26	0.00011	0.031	16.8	1.4	1	23	1123	1146	1123	1146	0.95
20	26	0.03	8.4	9.1	0.1	1	23	1154	1179	1154	1179	0.95
21	26	0.0021	0.58	12.8	0.3	1	23	1190	1212	1190	1212	0.96
22	26	0.13	34	7.2	4.2	1	23	1219	1241	1219	1241	0.97
23	26	0.00059	0.16	14.5	2.5	1	23	1247	1269	1247	1269	0.97
24	26	6.1e-05	0.017	17.6	1.1	1	23	1275	1298	1275	1298	0.97
25	26	0.00018	0.05	16.1	2.3	1	23	1304	1326	1304	1326	0.98
26	26	7.1e-05	0.019	17.4	4.8	1	23	1332	1354	1332	1354	0.97

Sequence Information

Coding Sequence: atggaacAATTCCAACATTTACACAATTTAAATATACACTCTTCGTGCAGGGCATGTCTAGAAAATCTCAATGACATGCACCATGATATATTCGAAATACCAGATCTCCAAAAGAAATTGACTATATGCACATCTCTGCCTGTGGAACCAGGGGATGGTCTTCCGACAAGTTTATGTGAACCATGTCATACGAAGATTGATGATTTTTATAACTTTCAACAAATGTGCATATCAGCCAGAAAAAGATTCCAGGATTATATAAATTCTGAGAAAAAACCATGTACATTGGAACTTGCTATTGATCCAAACAATCTACCAActgatttgataattttaaagaaagaaacCAAAAAGGAGCAAGATGAAAGTTCGACATCAAATGATGAATGTTCAGAATTCGCTGCTGCGGAACTAACAAACGTGAAAACCCAAGACGATTCCTCATCGCAAGACGAAGAAGAATCGGATGATGACCAGCCAGTCATAAAATATCATGAAAGTGATGACGACAATTCTATCAACGATAACAgtcaattaaatgaaaatgaagacACCAACGAGGATATAAAGCCGGTTGACACCACAAAGAAGAGCGCTCCTGGAGTGGTGATTGTCCTGGATtgtaaaatttgcaagaaaatctTTAAGAAAGAGGAGACTTTTAAAGCCCATATGCGCGTCCATGCAGGCCTCAAACCTTTTCCATGTCACCTGTGTGACAAATCGTATGCCAGACGAAGTAGACTCAAATCGCACGTACAAACGAAACATGAAGGAATACCTACGCTAAAATTTCCTTGTACGGAACCAGGTTGCGATAGAATCATGTGTTCCAAGCAAACTCTTAGAAAACACATTAAAGATATTCATTACGGCAATGGAACCAAAGCCAAGCAACCCTACATATGTGAAGAGTGTGGTAAAGTCCTAACTAGTTTGGCTACCTTGAAAAACCATCGCTATCTACACACCGGTCAGCAACTTCCACACGAGTGTCCACAATGCAAAAAGAGGTACATCACAAAAAACAAACTCAAGGAGCACATGAATAGACATGCCGGCATCAGAAACTATATTTGTCCACATTGTGGTGCTAGAAAATCAACACGAACCGAACTTAAAACCCACATTAACTATCACACCAAAGAGAAGACATATCCATGTCAGTTCTGCGGTAGTGTATTTAACAGTATTGGTAATTTTAGTCGACACAAGCGCATCGTTCATGAGGGTATCAAGGACTATCCATGTTCCTATTGTGACAAGTCTTTTGGCAAAGCTGAAACTAGAAAGCACCACGAAATGACCCACACTGGAGAAAAGCCGCACGAATGCAACATCTGTCACAAAAAGTTTATCCAGCCTGTTGCCCTTAAGAAGCATAAAAAGATTCATTTTAAAGGACAGGCAGGACAACCAGATTGGACAtgtcttaaaaatataaacgaaGTGCATCACAATATATTCGCCGAACCAGATCTCGAAAAGAAATTCACTGTTTGTACCTCGTTGCCCATAGAACCAGGTGATGGATATCCAACAAGTTTATGTGAGCCATGTCATACCAAGATTGATGATTTTTATAACTTTCAACAAATGTGCATCTCCGCCATGAAGCGATTTCAGGATTTTATTAATTCAGACGAAAAACCATGTAAGTCAGAAATGGGCATTGATTctaacaatttatcaaaagatTTGATTCTGTTAACTGAACCCAAAGAGGAAAAGGAAGATAATTCCTTATCTAATGATGAGTGTTCAGAGTTTTTTGAAACGGAGCTACCAAACGTGAAAAGCCAAGATGAGTACTCATCGGAAGGTGATGAAGGAGAATCTGACGATGATCAACCTATCGTAAAATATCGTGTAGGCAATAAAAACATTTCCACCAAGGATAATACATTGATTAAAAATGCTAACACCACAGATTATGTTAAAACTGGTAAAAGCAAAGAGACAAATTCGGTTTTGTCAATCAACTTGGAATGCGAAATATGTAAGAAAAGTTTCAGGAAAGCCGAAACCTTTGAAGAACACATGCGCATACATCAAGGACTTAAGCCATTTCCCTGCAAACAATGTGATAAATCTTATGCCCGTCCAGGTCGACTCAAAGTGCATGTAAGAGTCAAGCACGAAGGAAAACCATTCCCGTGCACCGAGCCAGGATGCGACAAGACTCTCTGCTCAAAACAAACTCTTCGGCAACATATCGCAGAAGTACACTGCAATACTAATGCAAACAACGGCATTAAAACCAAACAACTCTATATATGTGAAGAGTGTGGAAAAGTTCTGAAAGGTTTAAGCACACTTAAGAACCATCGCTTCCTGCACAGTGGACAACCACGTCCGCACGCGTGTCCACAATGCCATAAGAGATATATGACAAGATGCAAATTAAAGGATCATATGAACAGGCACGCCGGCATCAAGAACTTTGTCTGTCCCCATTGTGGGGCTAAGAAATCATCACGGAGCGAATTGAAAAACCACGTCAACTATCACACAAGAGAAAAAACCTATCCATGCCAAATTTGTAATATGGTCTTCAATAATATCGTCAATTACAGTCGCCACAGGCGAGTCGTTCATGAAGGTATTAAAAACTTTCCTTGCTCATACTGTGACAAGTCATTTGGAAAATCAGAAACGAGGAAGCATCATGAAATGACTCATACTGGGGAAAAGCCACACGAGTGTAACATATGTCATAAGAAGACATGTCTTGAAAACTTAAATGACATGGAAATGTATTATGATATATTCACATTACCAGATCTACAAGAGAAATTGACTGCATGCTCATCATTGCCTGTGGAACCAGAAGATGGTCTTCCAACAAGTTTATGTGAATCATGTCATACCAAGATTGaggatttttataattttcaacaaatgTGTCTCTCAGCTAGGGCACGGTTTCAGGACTACATACATTCAGAGAGAAAACCATGTTCAATGGAATTGCCCCCCATTCATCCAAACAATCCAACGAGTTTTATGATATTTACGGTATCTAAGAACGAGCGCGAAGAGGATGATCCTATATCTTCAGAACTGATTGAGCCTCTGCCTTCATTTAAAGTGCAGGACCAAAACTCATCGAATGACGAAGCTGAAGAATCAGAAGAAAGTCAAGCACAATATGGTGACTATAGTATAAATAATCCTAAAGGAAATTCCAGTGGTTATAGCAgcagaataaaaacaaataaaggaaCCCTCGAAGATATGGTATATCAAAAGAAGACAAATGCTCCTTTAAATAAGATGAAATTGGAATGCgaaatctgcaaaaaaaaattcaagaaaactgaaacttttgaggTGCATATGCGTTTGCATCAAGGACTCAAGTCATTTTCTTGTCAGTTGTGTGACAAATCATATTCACGTCGAGGTCGACTCAAATTGCACATAAAAGCCAAGCACGAGACAAAACCTCACGGAAATTTTCCCTGCAATGACCCGGGGTGCAACACAATATTGTCCAGTAAACAAACTTTTCAGGAACACATCAGGGATATACACAGGAAAAATGGCAAGAAACTCAAACAACGTTACATTTGTGAGGAATGTGGAAAAGTTCAGAGTAGCTTAGACGCCCTCAAGAAACATCGCTACCAACACACTGGTCAGCAATTGCCGCACGAATGTCCGCAATGCCACAAAAGGTTCTTATCGAAAAACATACTTAAGGAACATATAAACCGACATGATGGCATCAAGAACTACAGCTGTCCTCATTGTGGAGctaaaaagacaacaaaaaggGACTTGAAAAAACACATCAACTCTCAcactaaagaaaaaaagtttccgTGTCAGTACTGCAATATGGTTTATTATACTATGTATAATTTAAATCGACACAAGCGGATTGTTCATGAGGGTATCAAAGACTTTCCCTGCTCGTATTGCGATAAATCATTTGGCAGAGCAGATACCAGGAAGCATCACGAAATGACTCACACTGGTGAAAGACCACATGAGTGCAGCATATGCCACAAGAAGTTCATCCAATTCGCTTCTCTTAAGAAACATCAACAAGTTCATTTGAAAGGACTTAGAAAACGGAAATAA
Protein Sequence: MEQFQHLHNLNIHSSCRACLENLNDMHHDIFEIPDLQKKLTICTSLPVEPGDGLPTSLCEPCHTKIDDFYNFQQMCISARKRFQDYINSEKKPCTLELAIDPNNLPTDLIILKKETKKEQDESSTSNDECSEFAAAELTNVKTQDDSSSQDEEESDDDQPVIKYHESDDDNSINDNSQLNENEDTNEDIKPVDTTKKSAPGVVIVLDCKICKKIFKKEETFKAHMRVHAGLKPFPCHLCDKSYARRSRLKSHVQTKHEGIPTLKFPCTEPGCDRIMCSKQTLRKHIKDIHYGNGTKAKQPYICEECGKVLTSLATLKNHRYLHTGQQLPHECPQCKKRYITKNKLKEHMNRHAGIRNYICPHCGARKSTRTELKTHINYHTKEKTYPCQFCGSVFNSIGNFSRHKRIVHEGIKDYPCSYCDKSFGKAETRKHHEMTHTGEKPHECNICHKKFIQPVALKKHKKIHFKGQAGQPDWTCLKNINEVHHNIFAEPDLEKKFTVCTSLPIEPGDGYPTSLCEPCHTKIDDFYNFQQMCISAMKRFQDFINSDEKPCKSEMGIDSNNLSKDLILLTEPKEEKEDNSLSNDECSEFFETELPNVKSQDEYSSEGDEGESDDDQPIVKYRVGNKNISTKDNTLIKNANTTDYVKTGKSKETNSVLSINLECEICKKSFRKAETFEEHMRIHQGLKPFPCKQCDKSYARPGRLKVHVRVKHEGKPFPCTEPGCDKTLCSKQTLRQHIAEVHCNTNANNGIKTKQLYICEECGKVLKGLSTLKNHRFLHSGQPRPHACPQCHKRYMTRCKLKDHMNRHAGIKNFVCPHCGAKKSSRSELKNHVNYHTREKTYPCQICNMVFNNIVNYSRHRRVVHEGIKNFPCSYCDKSFGKSETRKHHEMTHTGEKPHECNICHKKTCLENLNDMEMYYDIFTLPDLQEKLTACSSLPVEPEDGLPTSLCESCHTKIEDFYNFQQMCLSARARFQDYIHSERKPCSMELPPIHPNNPTSFMIFTVSKNEREEDDPISSELIEPLPSFKVQDQNSSNDEAEESEESQAQYGDYSINNPKGNSSGYSSRIKTNKGTLEDMVYQKKTNAPLNKMKLECEICKKKFKKTETFEVHMRLHQGLKSFSCQLCDKSYSRRGRLKLHIKAKHETKPHGNFPCNDPGCNTILSSKQTFQEHIRDIHRKNGKKLKQRYICEECGKVQSSLDALKKHRYQHTGQQLPHECPQCHKRFLSKNILKEHINRHDGIKNYSCPHCGAKKTTKRDLKKHINSHTKEKKFPCQYCNMVYYTMYNLNRHKRIVHEGIKDFPCSYCDKSFGRADTRKHHEMTHTGERPHECSICHKKFIQFASLKKHQQVHLKGLRKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -