Dtri019104.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dasysyrphus tricinctus
Gene Symbol
ken
Assembly
GCA_963921185.1
Location
OY992530.1:240188858-240202376[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00014 0.038 16.5 3.1 1 23 240 262 240 262 0.99
2 24 0.00022 0.06 15.9 0.6 1 23 267 290 267 290 0.95
3 24 9e-07 0.00025 23.4 1.2 1 23 296 318 296 318 0.99
4 24 0.012 3.3 10.4 3.6 1 20 464 483 464 486 0.96
5 24 1.2e-05 0.0034 19.8 0.8 2 23 493 515 492 515 0.91
6 24 0.0016 0.45 13.1 1.7 1 23 677 699 677 699 0.98
7 24 1.8e-05 0.0049 19.3 1.1 1 23 705 728 705 728 0.96
8 24 0.071 20 7.9 0.6 1 13 734 746 734 749 0.89
9 24 4.4e-06 0.0012 21.2 0.6 2 23 787 808 786 808 0.97
10 24 4.5e-05 0.012 18.0 0.8 1 23 814 837 814 837 0.94
11 24 0.00014 0.038 16.5 1.0 1 23 843 865 843 865 0.99
12 24 0.76 2.1e+02 4.7 0.2 2 23 916 937 915 937 0.93
13 24 7.5e-06 0.0021 20.5 1.2 1 23 968 990 968 990 0.98
14 24 0.0003 0.082 15.4 3.8 1 23 996 1019 996 1019 0.95
15 24 8.9e-06 0.0024 20.2 1.5 2 23 1107 1128 1107 1128 0.98
16 24 2.4e-06 0.00066 22.0 4.0 1 23 1134 1157 1134 1157 0.96
17 24 0.0089 2.5 10.8 0.4 1 23 1163 1185 1163 1185 0.99
18 24 5.4e-06 0.0015 20.9 3.4 1 23 1262 1284 1262 1284 0.98
19 24 3.7e-05 0.01 18.3 2.7 1 23 1291 1314 1291 1314 0.96
20 24 0.0017 0.47 13.0 1.8 1 23 1320 1342 1320 1342 0.99
21 24 8.5 2.3e+03 1.4 0.0 3 21 1422 1439 1420 1440 0.76
22 24 2.2e-05 0.006 19.0 0.8 2 23 1581 1602 1580 1602 0.97
23 24 1e-05 0.0029 20.0 0.4 1 21 1608 1628 1608 1629 0.94
24 24 0.00037 0.1 15.1 0.2 1 20 1637 1656 1637 1658 0.95

Sequence Information

Coding Sequence
ATGCCCCTGGGATTCTCCAAGGCATGCCGAACATGCTTAACACTCGATGGAACACTTATTTCAATATACGATTCAATAAGCTACGATGGAAGGGGACGTATTACCGATATGATTAAAGACATTACAAAAATCAAACCCATGAAAACCGATGGCCTCCCTGAGCTAGTTTGTCAGACGTGCCTAAATGAAATTAATCGATGTTATTCATTTAAAGTCAAATGCCTAAATTCCGATAGTACATTGAGGAAACTCTTTGCTACTGAAGAAGATCTTGAAACACCAACACAACAACAGGTGTTGGATGAGGAAAAAGAATATAAACCTATCATTCAGAATCTTATCAGACTTCATGGTCCTGATCAAGAAGAGTTAGATTATGAACCACCAGTCAAAGTTAAAACGGAAAAAGACCAGAACGACCAATCGTTTGGTTACTTTGTTATTACTTCAGTTTGCAGCCAGAGTGAACAAACAAATGCGGCTGGAGTTGAGGAAACATTTAAAACATTTCAGACGCCCCAAGGATACATTAAAGAAGAGATCGATTATGAGGTTGAATCGTACAATACGTGCTCAACCCGACGTTTAACATACAGTGACCAATCGCAGTGTTTTGATAATATTTCTTTGGAAGTAGCATGTCCACAAGTGAAACTGGAACCtgaagatcctattcaaatggaAACTCCTATAATAAGTTCAATAATAAAGACGAATTTTAAGTGTCCTAAGTGCGACaaagAATTCTTATATACTTCGCGCCTCAAAAAGCACATGCGTTCTCACAATGCCAAACCTTTTGTTTGCTCAACCTGTTCCAGAGGTTTCAAGCTATCGTCACAACTTAGAAACCACATCGATATAACTCACCGAAATATTAAACCTTTTAAGTGTGAAGAGTGTCCTAGAACTTTTTCTTTTCCATCAAAATTGAAAGAGCACCTCAGATCACACAAAGGaagtaaatactttaaaaataatgattATTTATCTCACACTTTGATTGACAAAAAGGAAAACGAAGCACCAACTCAACAAATTGCCAAACATAGCGGAGTTATTGAATACAAAGAAGAACAGAAACCAGAACTTAAAAGCGATGAAATAACTAAAACCGTCAGCACCAATCTAGATGAAAGCATTAAAGAACAGACTATTGCTTGGACAAATGAGCGTTCCACAAGACGTTCGGCTCGAATTCATAGAGAAGAATTGAAAAGTCCAGACAGTGAACAAAATCAAACAGAGCCAACTAGTAGCGCTAGTGAAACAATTGGGACTAAAATATCAACAAGACTTTCTGAGAAGTTAATACAACATGTTGAttattcgtttgacagctcagaTCAAAACCTTGATGCAAAAAATAGTCCCGAAGGTCCAAGACAATATAATTGTCCTCACTGTAGTAAAATATTTAAATATGTATCACGTCTCAATGAACACATGGTATGTCACAGCGATGCCAGACCATTTGATTGCATTAACTGtggcaaatttttcaaaacacctGGCCAACTAACACGGCACATCAAAACAAGTCATAAGGTTTCTTCGTTCAGAGGTCATAGGAAAGCGTTTTCCAGACGACGTGGCTTGAAACGAAAAAATGTGAATAAAAACTTTGTTCGCAATAAAGTAGAGTCCGACATGAAAAGTCTCCAGCAAACCGATAAGGATATggctgaaaatgaaaatgacgaGGAACAAACGAATATGACGAGCACTGATCCGCCACATGAGCATATTATTGAAAACGAAAACCAAGTTAATCAAACAAATGAGACCAACAAAGATCAATcagaaaatgtaaataaaaatgaacttaCAAATGAAACTATTAATAGTTTGCCTGAAAACGAAACAAAACCAACTGTTGcgagtaaaaataaaaccaataagTTCGATTCTCCATCGAAGCACTcgacacaaataaataaagaaaatgcaTCCGAAAATTTGCAAACCCCAGCTGCCCTTGAGGAGTCTTACGAGGCAGGAAACATAAGTACTGATGAGCCACGCAGTTATCATTGTGAACAATGTGATGAAACATTTATTGTTTCGGCGCGTTTTTATAAACATATGCGTGGTCATGGTGTTGAAAGGCCATTCATTTGTtctttatgtggtaggggttttaaaaattgtggaAATCTCAAAAGTCATATTTTGATAACCCACAAGAAACTTAAGCCCTTCAAGTGCAATGATTGTAAACGTGCATTTTCATACTCTGTTGAAGTGAGTCCGAATCTCTCCAAACCAGAAGCAGATCAATTAAAACAACCACATATTGAGTCGATACCAAATAAGGCTGGAGAAATGAGTGTTAATAAGAAGCCAAAGAGTCGACTTGAATGTCCTCAGTGCAAAAAAGtttttgtgtacgTGTCGTACCTTAAAAAACATATGCAAAGTCACAGTGATGAAAGAAATTTTATCTGCACAATATGTGACAAAGCTTTTAAATACAAAGTCAGCCTAAAGTCTCACAATATGATAACTCATGCTAAAATAAAACCTTATAAATGTGATAAATGCCCTCAAGCTTTTGTCAATGAATACACTTATAGAGTGCATCGGAATTCACACAATAAggtgaataagaaaaaaactaagACTAAGCGGCGTCGTGCTATAGCTAAGCCTCGTATCGCAGAGCCAATAAGTACCAGTATTGATCAGAGCGTTAGCAATCTTAAAACAGAAGAGGTTGCTGGTGAAGTTAAGAATGATCTGACATCTTGTTCAATGTGCTCTATTTCAATTCAGTCAGAAAATTTAGTAGAACATATGCAACAATACCATAGTGCAACTGATTCAACAAGCGATCCTGTCAATCTTCCTAATAATAATTCCGATCAAGCCAAAAATCTAGGCTCAGATTTAACTAATCGGTTTGAGTGTCCTGAATGTAAAAAAgtatttttgtttgcttcgtACCTTAAAAAACACATGCGAAGTCACAACCATGAAAGACCACATGTCTGTTCAACTTGCGGCAAGGCTTTCAAAGACCATTGGAGGCTTAGGTCTCATATGAAGGAAAAACATACCTCGCACTCCAAAAAATGTAGTCaccgaaaaaagaaaatgaatttaaatcgTGGAAAACCATTGACTACAATTGTTGGAAATGCGGATGGGCAAGATCAAAATGTTCAAGTTGATGAAACCAGTGAAATCTTAAATACTCCACAAGAGAATCTCAAGGAAGATAATAATTTACCAGAAAAATCAGATCAATTGGAAATGGGAACTGATGTTATAATTTCCAAGGAGGTAGAATGCGCTAATGTTGAAATTGTGAAACCTCAGTGTACCCAATGCAACAGAGtgtTTCAGTTTGCTTCACAACTTGAGACGCACATGCGAACACATACCGGCGAAAGGCCTTTTGCCTGCCACACCTGTGACAAGACTTTTACACAAAAAGGTCATCTTAAAAACCACATCCTGattaatcataaaaaaataatgcccTTCCAATGCAGCGTTTGTTTGCGAGGATTCGCAAGTGGTTTTAATATGAGAGCGCATGAGAAAACCCACTTCAAAGAACGCCGCAAAAAagttaaatctaaaaaaattagtgaaaaattagaaaaatcccGTGATGAACATTCTACAGCTGATCCAGCCCTAGAAACCGTCCAAAATCTTCAAGATGTCCTTCAAGATCAAGTTATtcaggattttgaaaaactcgaTCTCCATCCGCTTTTTGGAACGATGTCTTCAAATCAAGATGAAAACTTAAGTAATGAACATAATAGTTTCTATCCGTGCTCCCATTGCGAAAAAACATTTGTATTCCATTCGGATCTTAATGCGCATATAAAAACCCATAGCGCGAATGCAAGACCATTTAATTGCTCAATTTGTTACAAGACTTTCAAACAAGCAGCTCATCTTAAGATTCACACCCAAATGAGTCACACAAAAACAAGGAATTACAAATGTAGTGAGTGCGATCGGGTATTCCTTACATTCTATATTCTCAATAAACATATGAGATCACACAAAGGGAAGAAAAACCGCAGTAAAGCTAAATCTAAGCGTGGTTATAAAAAAAGAGTTAATTACCTACAACAAACTGAATACTCGGAGCAGCTTTGTACCACTGAATTTGGAATAGATGAAACAAATGAACAGCAAACACAAGCAGTTAGCAGTGAAGAAGTTCCTGAgactttcaatatttcaagagAACAAATCCAACCACAAACCGCTGTTGCGAGAACAAATGTTCAAATAACCTGTGCGCTGTGTGCTGTGTCAATTGATTCAGATAATCTTACCGAACACATGAAACAGTGTCTTAGCATATCACAATCTACCAGTATTCAATTGAAATCAGAGCCCTTAGAAGATCCACAGCATATAGAGCACCCACTTTTCGAAACACTTTCTTCAAATCAGGATGAACAACAAATTGACACTGGCGTTTCAAAGCATTGTGCGGAATGCAATAAagGAGTCATACAACAACATAAGGTGCTGCACAATGAACAGCTTTCCGATTCATTCGAGGTTCATCAAGGTGTAAGACAACGAGATGTGTTGTCACcaattatgtttttattggaaattgaCGATGACAACATAGCGAAGCAGTTCTTCTTATGGAATCCTCAACGTAAGGAGCCTTTAGAGGAATCAGAATTAGGACATCAACCTTTGGAAACTGAGTCAATCCAGACCGAAACATCGAAGATCGACACACCACGCCGTCTACAATGTCCGACATGCGATAAAGAATTTATTCACCTGTCGCGGCTTAATGAACACATGCGAGCCCATAGCGATGAAAGACCATTCATCTGCTTGGTTTGCGGCAAGACCTTCAAACGGCATGGTCATCTTACGGCCCACATAGCCATGTGTTACAAAAAAGCAAAGCCATTTAAATGCAAGGAGTGCCAAGAAATGTTCTCAACTAGCTTGGACTTAAATGTTCATTTGGGGACATgtagtcgccaagagcttcctACGGGTTCTTTTGTTGATACAAATTCACAAAATGAAATCAACTTAGAGCCATCACAGAATGATGAATCTCTCCCTCCAAGTAATATAGGTGCCGAACTGATAGGAGAATGTACGGTTGAAGAGGCGCACCAGTGTACCTTATGTCCTACAGGTAAgacataa
Protein Sequence
MPLGFSKACRTCLTLDGTLISIYDSISYDGRGRITDMIKDITKIKPMKTDGLPELVCQTCLNEINRCYSFKVKCLNSDSTLRKLFATEEDLETPTQQQVLDEEKEYKPIIQNLIRLHGPDQEELDYEPPVKVKTEKDQNDQSFGYFVITSVCSQSEQTNAAGVEETFKTFQTPQGYIKEEIDYEVESYNTCSTRRLTYSDQSQCFDNISLEVACPQVKLEPEDPIQMETPIISSIIKTNFKCPKCDKEFLYTSRLKKHMRSHNAKPFVCSTCSRGFKLSSQLRNHIDITHRNIKPFKCEECPRTFSFPSKLKEHLRSHKGSKYFKNNDYLSHTLIDKKENEAPTQQIAKHSGVIEYKEEQKPELKSDEITKTVSTNLDESIKEQTIAWTNERSTRRSARIHREELKSPDSEQNQTEPTSSASETIGTKISTRLSEKLIQHVDYSFDSSDQNLDAKNSPEGPRQYNCPHCSKIFKYVSRLNEHMVCHSDARPFDCINCGKFFKTPGQLTRHIKTSHKVSSFRGHRKAFSRRRGLKRKNVNKNFVRNKVESDMKSLQQTDKDMAENENDEEQTNMTSTDPPHEHIIENENQVNQTNETNKDQSENVNKNELTNETINSLPENETKPTVASKNKTNKFDSPSKHSTQINKENASENLQTPAALEESYEAGNISTDEPRSYHCEQCDETFIVSARFYKHMRGHGVERPFICSLCGRGFKNCGNLKSHILITHKKLKPFKCNDCKRAFSYSVEVSPNLSKPEADQLKQPHIESIPNKAGEMSVNKKPKSRLECPQCKKVFVYVSYLKKHMQSHSDERNFICTICDKAFKYKVSLKSHNMITHAKIKPYKCDKCPQAFVNEYTYRVHRNSHNKVNKKKTKTKRRRAIAKPRIAEPISTSIDQSVSNLKTEEVAGEVKNDLTSCSMCSISIQSENLVEHMQQYHSATDSTSDPVNLPNNNSDQAKNLGSDLTNRFECPECKKVFLFASYLKKHMRSHNHERPHVCSTCGKAFKDHWRLRSHMKEKHTSHSKKCSHRKKKMNLNRGKPLTTIVGNADGQDQNVQVDETSEILNTPQENLKEDNNLPEKSDQLEMGTDVIISKEVECANVEIVKPQCTQCNRVFQFASQLETHMRTHTGERPFACHTCDKTFTQKGHLKNHILINHKKIMPFQCSVCLRGFASGFNMRAHEKTHFKERRKKVKSKKISEKLEKSRDEHSTADPALETVQNLQDVLQDQVIQDFEKLDLHPLFGTMSSNQDENLSNEHNSFYPCSHCEKTFVFHSDLNAHIKTHSANARPFNCSICYKTFKQAAHLKIHTQMSHTKTRNYKCSECDRVFLTFYILNKHMRSHKGKKNRSKAKSKRGYKKRVNYLQQTEYSEQLCTTEFGIDETNEQQTQAVSSEEVPETFNISREQIQPQTAVARTNVQITCALCAVSIDSDNLTEHMKQCLSISQSTSIQLKSEPLEDPQHIEHPLFETLSSNQDEQQIDTGVSKHCAECNKGVIQQHKVLHNEQLSDSFEVHQGVRQRDVLSPIMFLLEIDDDNIAKQFFLWNPQRKEPLEESELGHQPLETESIQTETSKIDTPRRLQCPTCDKEFIHLSRLNEHMRAHSDERPFICLVCGKTFKRHGHLTAHIAMCYKKAKPFKCKECQEMFSTSLDLNVHLGTCSRQELPTGSFVDTNSQNEINLEPSQNDESLPPSNIGAELIGECTVEEAHQCTLCPTGKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-