Dtri065144.1
Basic Information
- Insect
- Dasysyrphus tricinctus
- Gene Symbol
- -
- Assembly
- GCA_963921185.1
- Location
- OY992533.1:102461575-102461925[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-09 1.4e-05 26.7 0.1 5 45 13 54 12 54 0.95
Sequence Information
- Coding Sequence
- atggtaccccacAAGCAAAAATACCCAGCACCCTCGTTAGACGAAGCTTTTAGAGAGATTAGGAATAGGTCTATGGGTATTCGAGCAGCTAGTAGGGCATTCGGAGTCCAAATTACAACTCTGCATGTGAAAATTAAACGTAGATCTGTAGATAGAATGCAAAAACCTGGCCCAGCAAGCGTGTTAACTGAAGCGGAGGAGGGTAAAGTTGTGGAATGGCTAACAAATATTGCCAAATGTGGGTTTCCACAAAAACCCAATGAATTCCTCGATGTTgtccaaaaaataataaaagacgaAAAGAGAAAGACTCCTTTCAGGAATGATAGACCAGGAAAAAAATGGTACTAG
- Protein Sequence
- MVPHKQKYPAPSLDEAFREIRNRSMGIRAASRAFGVQITTLHVKIKRRSVDRMQKPGPASVLTEAEEGKVVEWLTNIAKCGFPQKPNEFLDVVQKIIKDEKRKTPFRNDRPGKKWY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00427081;
- 90% Identity
- iTF_00427079; iTF_00427080; iTF_00427081;
- 80% Identity
- -