Dtri040886.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dasysyrphus tricinctus
Gene Symbol
agl
Assembly
GCA_963921185.1
Location
OY992531.1:221185250-221190500[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-09 8e-06 27.5 0.0 1 34 9 42 9 48 0.91

Sequence Information

Coding Sequence
ATGCCTAAGTGTACTGGTAAATATACCGAAAAGGACCTCGAGAAAGCTATTGAAGCTGTGAGGACACAAAAGATGTCCAAAAAAGCTGcagcaaaattttttaatattcctcGAACTACACTCATATTTCGATTGAGTTCTAAGTTCGTTAAAGCAAGGCCAGGTCCACAAACAGTTTTGTCCGCTATAGAAGAAGAGTGTTTGGAACAATGGATAACCACATCCCAGCGTAAAGGTTTCCCCAAGAGAAAAGAGGATGTGCTTCATGCCGTCAAGGATTTTCTTGAAGAAGACAAAAGGGAACATCCTTTTGGGCCACAAAACATTCCAGGGAATGGCTGGTTTAAGGCGTTTTTGAGCCGACACCCTTCAATAAGCCTTAGAACACCAGATCCGGTAACATCGGCCAGCGCAACAGTTGGATCATCAGACATCAAATCGTGGtttattttaatagaaaaatatcTCGAGGAGCAGAACATGTTGGACATTTTAAGCGATGCTACCAGAGTTTATAATGGGgatgaaaccaattttttattGTGCCCAAAAACCAAAACCGTGTTGGCAGCAAAGGGTGCACGTAACATATATGAAGTGGACCGAGGACTTGCAAAATCCAACTTAACGGTTATGTTTTCTTTCTCTGCATCGGGTATTTTGGTTCCACCCATGGTTATCTATCCATATAGAAGAATACCAGAAgatataagaaaatcattgCCCAAGGGATGGGGCCTTGGTATAAGTGACAATGGATGGATGACAAAAGAAGTCTTTTATGAATACATATCGAAAGTATTTCATCCACACCTTGTCAGCGTTGGAACCATTTTTCCAGTTATTTTTTTCGTTGACGGTCATGCAACACACCTTACATTATCGGTCAGCAAATTGTGTGTCCAGTTAGGAATCATATTAATTGCGTTATATCCTAATGCCACACGTATTTTACAGCCAGCGGATGTTTCGGCATTTAAGCCCCTGAAAAATGGTTGGAATAAGAAGGTTTCTGAGTGGCGCCGACAAAACAGTGGTGAGTCTCTCACACGGCAAAAGTTTGTTCCGTTACTAGAAGAAGTGATCCTCTCATCAATTTCACctgaaataattcaaaaaggaTTTAGAGCGTGTGGGCTTTTTCCTTGGGATGTAAATGCGATTGATTTCTCCAGGTGTCTAGGGAAATCATCAAGGGCGCAATTAACACCAGTGTCCGCTCAAGATCAAAATTccacaaataatataaatatttgttataaTACTTTCTCGGAATTGGTTGGCACTCAGAAGCTGGAAGAATTCGAAAACGCGAAAAATGGAATTGGAAGCACTTTGTGTTATTCGGAGGAGtggaaaatattatataaaatgtttttgaaatttaatccGGACACTATATCTACAAACAAGGCCGATACTAATTTAGTCGTCGATTTCTTAGATGGAATAGATATAAATAATATCGAAGAATTTATATATGATACTGAGACGGTTCCAAATGAAATTCAGAATAACGAACTAATGCTAAATAATATAATCAGTATTCCAAATGAAATTCAGAGTAACGAACTAATGCTAAATAATATAATCAGTATTCCAAATGAAATTCAGAATAACGAGCTAATGCCTAATAATATAAGCAGTATCGATATTGACAATTACTTGGATTGGCCAATTACTCCAGAACGGCAGGGTGTCAAGCCTATTAAACCAAAAAGATCTTTCGACTCCAATGGGATGGGTGTTAAAGGACACTTAGTCATGAAATCATCAAACGATACACCTTCATTTGTTTCATGGAATTGGCCACTCATAcgaaaatgtactttttttatttttatgtcaaGTTTACTGGCAATgtgtgctgttgttgttgcaatgATCATAACTCTGCCAAAAACTTGTAATCCAAAAACGGCTTGGTTTCGAGGAAGTGTTTTCTATGAAATATTTCCAGCAAGCTATCAAGACTCAAACAATGATGGACTTGGGGATTTAAGAGGAATAACAAGGCGTGTTGATTATTTATCTGCTCTTGGAATAGGAGCAGTTCGTTTGAACTCAATTTTCCCCACCGAACATTATCCCGATGACTTCAACAATGTAACGTCGTTGGTGAATATTGCAACAGTCATTGGAAGCACAACAGATCTACTTCAGTTATCACGAGCACTCCATGCTAGAAATATATCACTTATCCTCGACTTGCCGATATTTCCCTATCTCAAGCATTTAGAAGAAGCTAATGAAGTAAATTACACGGCTAATCCCAATGTGACCGAGACAGCACCAATTGAAACTAGTAATCTCATTTCGATTGCAATTCAAAAGTGGATCGGGCTTGGTGTTGATGGATTCTATATTAAAGGATTGGAAATGTATACAAATGATGATAACCTTTTGAATAATATTGCCGAATGGAAGCACATCCTGGGGCCACAAAAAGCCCTGATTATTGATAATGGAGTTATTGAAAAACTCAGCTCTGCCAGGGCAAACCAAATCCTAACGCACGTAGATTTGGTCGATGTTCATCTAAATGTATTAAATGGCACTCAGCATATGATGCAACAGATTCAGGGAGCTTTGAAGGGAATTCTAGCTCCCAGAGAAGATGGTCCCTGGATTCAATGGTCGATCGGAGGGGTAGGCGAGCAAAGGGTTTCACGCAAAATGAACGGAAATGCTTCCCTTACTGCTACAATCATGCAGTTGATGCTACCAGGATCTCCAAATATTTTCTACGGCGATGAAATTGCTCTGGAAAATGTTCATGATCCCCACAATGAACACTCTGAAACAAAGCACCTCCATCACCTTTCAACCATGGAATGGTCAGATGCACTGAAATTCACTAGCAGGGAAACCCTGCCATGGCTGCCAAAGAGCTCTTCctttaatttggaaaatttcgAGCAAGTCTCACGAATGATTCACCTGCGTGATCGTTCACCATCCATTTATAAGAATGTCATTTGTAAAGCTTCACAAAATATTCCCAATACTCAGGTGCGGAATAGTAGAGATGATATTATCATTGTCGAGAGAATCTATCCACGGAGGAATTCGTTTGTGTCGATTTCGAATTTTGGCCAAAGTATGGTTCAAATGGATATGACTTCTATGTACTATAGTGGGCATGTGATGTTGGGAAATACTCAAAGTGATAAAATCTACTTTGGGGAGTTTCAAATCGGTGGTATGGAAAGTATTGTTGTTAGACTtgataaataa
Protein Sequence
MPKCTGKYTEKDLEKAIEAVRTQKMSKKAAAKFFNIPRTTLIFRLSSKFVKARPGPQTVLSAIEEECLEQWITTSQRKGFPKRKEDVLHAVKDFLEEDKREHPFGPQNIPGNGWFKAFLSRHPSISLRTPDPVTSASATVGSSDIKSWFILIEKYLEEQNMLDILSDATRVYNGDETNFLLCPKTKTVLAAKGARNIYEVDRGLAKSNLTVMFSFSASGILVPPMVIYPYRRIPEDIRKSLPKGWGLGISDNGWMTKEVFYEYISKVFHPHLVSVGTIFPVIFFVDGHATHLTLSVSKLCVQLGIILIALYPNATRILQPADVSAFKPLKNGWNKKVSEWRRQNSGESLTRQKFVPLLEEVILSSISPEIIQKGFRACGLFPWDVNAIDFSRCLGKSSRAQLTPVSAQDQNSTNNINICYNTFSELVGTQKLEEFENAKNGIGSTLCYSEEWKILYKMFLKFNPDTISTNKADTNLVVDFLDGIDINNIEEFIYDTETVPNEIQNNELMLNNIISIPNEIQSNELMLNNIISIPNEIQNNELMPNNISSIDIDNYLDWPITPERQGVKPIKPKRSFDSNGMGVKGHLVMKSSNDTPSFVSWNWPLIRKCTFFIFMSSLLAMCAVVVAMIITLPKTCNPKTAWFRGSVFYEIFPASYQDSNNDGLGDLRGITRRVDYLSALGIGAVRLNSIFPTEHYPDDFNNVTSLVNIATVIGSTTDLLQLSRALHARNISLILDLPIFPYLKHLEEANEVNYTANPNVTETAPIETSNLISIAIQKWIGLGVDGFYIKGLEMYTNDDNLLNNIAEWKHILGPQKALIIDNGVIEKLSSARANQILTHVDLVDVHLNVLNGTQHMMQQIQGALKGILAPREDGPWIQWSIGGVGEQRVSRKMNGNASLTATIMQLMLPGSPNIFYGDEIALENVHDPHNEHSETKHLHHLSTMEWSDALKFTSRETLPWLPKSSSFNLENFEQVSRMIHLRDRSPSIYKNVICKASQNIPNTQVRNSRDDIIIVERIYPRRNSFVSISNFGQSMVQMDMTSMYYSGHVMLGNTQSDKIYFGEFQIGGMESIVVRLDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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