Dtri065036.1
Basic Information
- Insect
- Dasysyrphus tricinctus
- Gene Symbol
- -
- Assembly
- GCA_963921185.1
- Location
- OY992533.1:100077223-100084859[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2 1.2e+04 -1.8 0.1 35 44 35 44 34 45 0.80 2 2 3.5e-09 5.1e-06 28.2 0.0 2 41 80 119 79 121 0.93
Sequence Information
- Coding Sequence
- ATGCGCACAACTGAAAAACGTGCACATGTGCATATGGTGcagcggaaaacaagagcagcgagAGAGAAGTATCGAGAACGAGAAGAGAGAGAAGAAGACCATGCGAGAAAGAAAAGGGCGTATGCAGCCTCCCAGCTCAAGGAAATTGAGGAGCCTCACGATCGAAACAACACCTGGCTCTTCGAAGCAGCtatGCCAGCAAACTACAAAAGGAACTCAACCAGGCTTCCTTGGTCAAAAGAAAACATGGATAAAGCCATTCGAGATGTCAAAAACAAACAGTGTGGTTGGCTTTTGGCCGCTAAAAAGTATGAAGTGCCACAAGGCACTCTTCGGCGCCACCTCAAAGCCATTCCAAAATCATAG
- Protein Sequence
- MRTTEKRAHVHMVQRKTRAAREKYREREEREEDHARKKRAYAASQLKEIEEPHDRNNTWLFEAAMPANYKRNSTRLPWSKENMDKAIRDVKNKQCGWLLAAKKYEVPQGTLRRHLKAIPKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -