Dtri056047.1
Basic Information
- Insect
- Dasysyrphus tricinctus
- Gene Symbol
- -
- Assembly
- GCA_963921185.1
- Location
- OY992532.1:197909713-197910302[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-11 1.4e-07 33.1 0.0 5 39 1 34 1 37 0.92 2 2 5 7.3e+03 -1.1 0.0 17 23 86 92 79 93 0.86
Sequence Information
- Coding Sequence
- ATGGAAAATGCCTTGAAGTCTGTAGAACGTGGTTTGTCACAACATGAAGCCTCCAGGCGCTTTGGAATTCCAAGAAGAACATTCAGGAATCACATCAAGAGTGGTTCAAGTTGTAATGCCATAATTACCCCAAAGATGCTCCGATACCAAGCTGCCATTTTTTGCAATTTGAACAACATCCCGAACCGCCTAAGTAATTCAGAAAATGGCGCTGGAAGAAAGTGGTTGTGGTTGTTTATGAAACGACACCCGGAAATCTCAGTACGCAAGGCTCAAATGATGAACCCAGCAAGAGCCCAGAAACTCAACAGGCATATTGTGTCCGATCATTTTGAGAAGGGCTGTAGGATTTCGCTCCATCACCAGCGGAATGTCTTGGCCCAAAAAGGATCGAAACGGGTTCATCAAATTTCCAACGAACATGCCGAAAGTGGATGA
- Protein Sequence
- MENALKSVERGLSQHEASRRFGIPRRTFRNHIKSGSSCNAIITPKMLRYQAAIFCNLNNIPNRLSNSENGAGRKWLWLFMKRHPEISVRKAQMMNPARAQKLNRHIVSDHFEKGCRISLHHQRNVLAQKGSKRVHQISNEHAESG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -