Basic Information

Insect: Dasysyrphus albostriatus
Gene Symbol: ush
Assembly: GCA_946251825.1
Location: CAMIUB010000048.1:2819682-2838634[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.014 2.2 9.9 0.0 1 20 280 299 280 301 0.90

2 9 0.00029 0.043 15.3 0.8 1 23 354 376 354 376 0.98

3 9 0.03 4.6 8.9 1.0 2 21 401 420 401 421 0.92

4 9 0.05 7.4 8.2 2.9 2 21 794 813 793 814 0.93

5 9 0.021 3.1 9.4 0.1 3 21 852 870 850 871 0.92

6 9 0.24 36 6.1 0.1 1 23 918 940 918 940 0.91

7 9 0.014 2.2 9.9 1.3 1 23 946 968 946 968 0.99

8 9 0.00041 0.061 14.8 0.8 1 23 1051 1074 1051 1074 0.96

9 9 0.48 72 5.1 0.7 2 20 1212 1230 1211 1232 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.014	2.2	9.9	0.0	1	20	280	299	280	301	0.90
2	9	0.00029	0.043	15.3	0.8	1	23	354	376	354	376	0.98
3	9	0.03	4.6	8.9	1.0	2	21	401	420	401	421	0.92
4	9	0.05	7.4	8.2	2.9	2	21	794	813	793	814	0.93
5	9	0.021	3.1	9.4	0.1	3	21	852	870	850	871	0.92
6	9	0.24	36	6.1	0.1	1	23	918	940	918	940	0.91
7	9	0.014	2.2	9.9	1.3	1	23	946	968	946	968	0.99
8	9	0.00041	0.061	14.8	0.8	1	23	1051	1074	1051	1074	0.96
9	9	0.48	72	5.1	0.7	2	20	1212	1230	1211	1232	0.91

Sequence Information

Coding Sequence: ATGATGATGGCAATGATGATGCGACTGATGATGGATGGACGGAAGGATGGATGGATGAATGAGGCTGAGAGGAGAGATTCTTTTCACAGCTATATAGCCATCCAGGCGGAGATTAAAATGCAGAGTTGCCGCCGCCACCGCCATACAGCCACCACCACCTCTATTTCCACCGCGCCATCAACTTGGAGTAGACCATCATCACCGAAGAAGAGTGTGCCTTTGGGTTGTGGTGAACTTATCCCACCATCATCATGGTTTTTGTCATTTCGTATTCGAATTCACTATGAATACCATTCTTGTTTAATTGTAAAAGATGCAAGATGCACTTTAGGCATGCGACGAGGAGATTGCTTGACTCGAAAAACAAAAGATCTAAGCCCAAGCGATTTGAATGAGCAAACCGATCCGGTTGCTTCGGCTGACATTGATCAATCAGCCGAACCAACAACAGAATCCCTAATGGAGGAAGAAAATTTTCCGGCTGCGAGTTCGCCCAGAACCCTTTCACCGCCCTCAGAACCAGAAGTTGATGATAGAAATTCACCTTCAGTTCAATCAGATCTCCCATCGGAAGCGAACTCACCGTCAGAGCCAGACGACTCCTCATCAATAGTTCCTGCTGTCGCGGTAACTGCGATTCCTAAACTACGACTGAATGCACTACTAGCTTCTGATCCTGCTCTCAATCCAGATGCGAGAAATTTAAAGATTCTTCATGAAGAATCAACAAAGAATCACCATCAGTTGGAGGAAACCTTACCTGCACCTGTCGATCAGAAGCCCTCTGTTAAGAGCCAAATTCCAGCGGCTGTGGATAATTCACAGCGTGTGAAAGTTTTTATGTGTCTTCCCTGTGGAATTGGATTCTCGTCGAGATCGACTTTGGAAGCACATCAAGCTTACTATTGTTCCCACAGAAAAGAAGCCGAAGAAGATTCGACAGGTGGCGGAGGTGGTGGTGGAAGTGGAGCTGGTGCTGGGAGCACATCATCGGGAGATAAATCCACCATCACATCCAGTGGTGAACCATCAGCGAAATCTATTAAGACTGGCAAGCAGTACGCTTGCACACAGTGCTCCTATAGTGCCGATAAGAAAGTCTCATTAAATCGTCACATGCGAATGCACCAAAGCTCTCCGGCGCCAAGTTCGAACGCCTCCAATGGTGGCGATGATAGTTCTAGTCAACAAGTCGATCGTTACTGCTCCGAATGTGATATTAGATTCTCGAATGTTAAAACGTATCGTGCTCATAAGCAACATTATTGTAGTTCCAGGCGTAATGATGGCCAAACAACTCCAAAACTTGCAGAGCCAAGTGTTAAAACTAGTGGCGGTTCAGTAAGCCCTCCAcaggtgcgaaccaaaacaccaacaccagcagctgtagtagcagctgcagcggccgcagctgcagctgcagttgcaccacaaccatttattgctctgccCACAAATCCCATTCTCATAATTCCATATTATTTAATCCGAGCTGCAAGTATGATTCCAGGGCCATTAACCTCAGTGTCTCCTGGGATTCCAAATCCTGAAAGCACATGTTTCTCACTTGAAAATGGATCTCTCAAACCAATGGCTACCGCCTTAAGCACCAGTAGCATTACAAATAACCAAATTCCACATGTGGATACAACGCCACGAACACATCCTCCACCATTACCAACTACTCCATCGATTTCTGACGCAAATATTGTCACACCACTATTAACAGAGAAAAATACACGTGCATCATCTGCAAACAGTTGTAGTGATTCTGTGAAACAAACCAAGAAAGACATGCCCATAAGAGATTTTGCTCCGCTTGATCTATCTCTGCGACGTTCTCCCATCCAAAGAGCCCATCGGGTTCGTTCGTCATCTAGTTTTATGACACCAATTGACGATAGAATCGACATTGAAACTATGATGGAGGGCAAGGAGAACTTATCCATTGATAGTGGTAGTATAACACCGGAACAAATAGTTTGCGCACCTTCTCTACCCAATAGCCCTTCAATGAGCCCCTCGCCTAAGAGAAGAGCCCTCAGTCCCAGAAGTAGCAGTGCTGCTTCAATATCACCAGTTCCACCATCTGTTATTGATCATTTACCATTGAGATCTATGCTTCCTGCTGACATTGCCATGAAACTAACTGAATCCAATATAATTCCTCCACTAATTGCAAAACAGAACTTAGAACTGGCATTTAAGCTGTCAAGTGCTTCAGCTGCCGCAGCGGCAGCTGCAGCAGCTGTGTCAGCTTCAAGCAAACAAAACGATTCTGGCAAGGCATCATCACTCTTAGGACATCCTGGAAATCCTATCAGTGTGGGCTCAGCATCCAGTGGACAGCCACAGATTTTCGTCAAACAAGGTGTCTCAAAGTGCAAAGAGTGCAACATAGTGTTTTGCAAATATGAGAACTACTTGGCCCACAAACAACATTATTGCTCGGCTAGAAACCAAGAAGATTCCGAAAACAAGACTAGTACTCCTCCGTCAGGGTCCAGTGCTGGAGGAGTAGATACAAATCCAATTGCATATCAACAGTTGATCTGTGCAGCTTGTGGTATCAAATACACTTCAATGGATAATTTAAGAGCCCATCAGAAATTTTATTGTCCAAAAGGAGGTGGTGACGCTGCTGCCGCTGCTGCACCTATAACTAAGGAAAAATGTTCCAAGTGTAAGGTTCTACATGAAATTGGACAGCCATGTCCGCCAACAGCGGCTACAGCTCAACCACAGTGCTCCTACAAATGTCCCGTTTGTGATGTTGTAAGCTTAACTGCTTCCGAAAGTCGCAAACATCTGGAAACTCATGGCAGTGTTAAGGCATTTCGCTGTTCAATCTGTCGCTATAAAGGAAACACATTGCGTGGCATGAGAACTCATATTCGGATGCATTTTGATAAGAAAACATCGGACTTTAACGAGGAGaattacatgtcttgcatattagaggatgatggcttggaaattcctagtcccgtagcaatgagtcaggagcaaatatctcaaattgctgcagcacatcaacagcttcagcaacagcaacagcaacaacaacaacaacaacaccatcaacagcaacacttattacaacaacagccatcaacacaacagcactccccacagaatcctcagcagATATTTAACTGTGAAATGTGTAACTACTCATCATCTTACAAAGGCAATGTGATGCGTCACATGAAACTGGTACACTCACAACCTGGTACATCGCCATCGATTTCTCCTGAAGTGGTCATCGAAGAAAGTGAGTCATCATCAGCAATTCAAACATTAAACGGAGACAACAACGGTTGCAGCCTTCCAGGGGGTTTCACCATAAAAACAGAACCCTTAGAGCCTATCGTCGTAGCTTCTGCCATCAAGAACAATAATTCCAATTCAACTCCAAATCATCATCCGCCGCATGCTCTACACCATTTGGAACCCATCACCCAAGTCAAATCTGAACCAATGGATACAGATGTTAGTGTAATAAGATCTCTACACTCGCCACTCTCAATTCCTCCACCGCCGCTCTTAAATTCAACATCTCCACTATCAGCCGATGAAAATTCCCTTCTAAGAAATAGCACATCATCCGGGGGAATGCCATTAAATCAAAAATATTGTCAAACGTGCGATATAACTTTTAATTATATGAAAACCTATTTAGCACATAAACAATTTTATTGTAAGAATAAACCAAGAGCTGATACAGATAGTCCGAGTCCAGTGACGCCAGTGCAATCTCCAACTATGTTGACTAAAAATAAAGAGAATTTGGAAGCTGCGATGTTATAG
Protein Sequence: MMMAMMMRLMMDGRKDGWMNEAERRDSFHSYIAIQAEIKMQSCRRHRHTATTTSISTAPSTWSRPSSPKKSVPLGCGELIPPSSWFLSFRIRIHYEYHSCLIVKDARCTLGMRRGDCLTRKTKDLSPSDLNEQTDPVASADIDQSAEPTTESLMEEENFPAASSPRTLSPPSEPEVDDRNSPSVQSDLPSEANSPSEPDDSSSIVPAVAVTAIPKLRLNALLASDPALNPDARNLKILHEESTKNHHQLEETLPAPVDQKPSVKSQIPAAVDNSQRVKVFMCLPCGIGFSSRSTLEAHQAYYCSHRKEAEEDSTGGGGGGGSGAGAGSTSSGDKSTITSSGEPSAKSIKTGKQYACTQCSYSADKKVSLNRHMRMHQSSPAPSSNASNGGDDSSSQQVDRYCSECDIRFSNVKTYRAHKQHYCSSRRNDGQTTPKLAEPSVKTSGGSVSPPQVRTKTPTPAAVVAAAAAAAAAAVAPQPFIALPTNPILIIPYYLIRAASMIPGPLTSVSPGIPNPESTCFSLENGSLKPMATALSTSSITNNQIPHVDTTPRTHPPPLPTTPSISDANIVTPLLTEKNTRASSANSCSDSVKQTKKDMPIRDFAPLDLSLRRSPIQRAHRVRSSSSFMTPIDDRIDIETMMEGKENLSIDSGSITPEQIVCAPSLPNSPSMSPSPKRRALSPRSSSAASISPVPPSVIDHLPLRSMLPADIAMKLTESNIIPPLIAKQNLELAFKLSSASAAAAAAAAAVSASSKQNDSGKASSLLGHPGNPISVGSASSGQPQIFVKQGVSKCKECNIVFCKYENYLAHKQHYCSARNQEDSENKTSTPPSGSSAGGVDTNPIAYQQLICAACGIKYTSMDNLRAHQKFYCPKGGGDAAAAAAPITKEKCSKCKVLHEIGQPCPPTAATAQPQCSYKCPVCDVVSLTASESRKHLETHGSVKAFRCSICRYKGNTLRGMRTHIRMHFDKKTSDFNEENYMSCILEDDGLEIPSPVAMSQEQISQIAAAHQQLQQQQQQQQQQQHHQQQHLLQQQPSTQQHSPQNPQQIFNCEMCNYSSSYKGNVMRHMKLVHSQPGTSPSISPEVVIEESESSSAIQTLNGDNNGCSLPGGFTIKTEPLEPIVVASAIKNNNSNSTPNHHPPHALHHLEPITQVKSEPMDTDVSVIRSLHSPLSIPPPPLLNSTSPLSADENSLLRNSTSSGGMPLNQKYCQTCDITFNYMKTYLAHKQFYCKNKPRADTDSPSPVTPVQSPTMLTKNKENLEAAML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357492;
90% Identity: iTF_00664445;
80% Identity: -