Basic Information

Insect: Dasysyrphus albostriatus
Gene Symbol: L
Assembly: GCA_946251825.1
Location: CAMIUB010000291.1:182194-197426[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.2e-06 0.00078 20.8 1.7 1 23 244 266 244 266 0.98

2 16 0.44 65 5.3 5.8 1 23 272 294 272 294 0.98

3 16 2.3e-07 3.4e-05 25.0 3.1 1 23 300 322 300 322 0.99

4 16 1e-05 0.0016 19.8 0.3 1 23 328 350 328 350 0.98

5 16 8.6 1.3e+03 1.2 0.2 3 23 414 436 412 436 0.81

6 16 0.0036 0.53 11.8 0.4 2 23 454 476 453 476 0.97

7 16 0.019 2.9 9.5 1.4 1 23 557 579 557 579 0.97

8 16 0.00017 0.025 16.0 1.2 2 23 587 608 586 608 0.96

9 16 0.00012 0.018 16.4 0.9 1 23 616 641 616 641 0.89

10 16 0.0014 0.2 13.2 2.9 1 23 733 755 733 756 0.96

11 16 0.00099 0.15 13.6 4.6 2 23 941 963 940 963 0.96

12 16 0.12 17 7.1 0.1 1 23 969 991 969 991 0.92

13 16 2.5 3.8e+02 2.9 0.5 2 23 999 1020 999 1020 0.93

14 16 4.8 7.2e+02 2.0 0.6 2 23 1110 1131 1110 1131 0.92

15 16 0.0083 1.2 10.7 0.0 1 23 1141 1163 1141 1163 0.96

16 16 2.2 3.2e+02 3.1 1.2 1 23 1170 1192 1170 1192 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.2e-06	0.00078	20.8	1.7	1	23	244	266	244	266	0.98
2	16	0.44	65	5.3	5.8	1	23	272	294	272	294	0.98
3	16	2.3e-07	3.4e-05	25.0	3.1	1	23	300	322	300	322	0.99
4	16	1e-05	0.0016	19.8	0.3	1	23	328	350	328	350	0.98
5	16	8.6	1.3e+03	1.2	0.2	3	23	414	436	412	436	0.81
6	16	0.0036	0.53	11.8	0.4	2	23	454	476	453	476	0.97
7	16	0.019	2.9	9.5	1.4	1	23	557	579	557	579	0.97
8	16	0.00017	0.025	16.0	1.2	2	23	587	608	586	608	0.96
9	16	0.00012	0.018	16.4	0.9	1	23	616	641	616	641	0.89
10	16	0.0014	0.2	13.2	2.9	1	23	733	755	733	756	0.96
11	16	0.00099	0.15	13.6	4.6	2	23	941	963	940	963	0.96
12	16	0.12	17	7.1	0.1	1	23	969	991	969	991	0.92
13	16	2.5	3.8e+02	2.9	0.5	2	23	999	1020	999	1020	0.93
14	16	4.8	7.2e+02	2.0	0.6	2	23	1110	1131	1110	1131	0.92
15	16	0.0083	1.2	10.7	0.0	1	23	1141	1163	1141	1163	0.96
16	16	2.2	3.2e+02	3.1	1.2	1	23	1170	1192	1170	1192	0.92

Sequence Information

Coding Sequence: ATGCAGGAGCAGGAGCAGTATACAAAACGCTGCGATCTGTTCTGCGACATGACACCTACGACAGAGGGTGTTTTAATTAAAGACAGCATCAGTATTTTAGAATCTTATCTGTACTCAACACACACCTCGTCCAGCTACTCGCCTTCCATGTCGGACGGGACAATTACTCCAAACTCGCTGcatcaccatcatcttcatcatcaccatcatcatcatcagcagcagcaacagcagcagcagagactgcatcaccacttgcagcagcaataccattgtgaacagcaacagaatagcggcagtggcggtggtcacaaccgcgacaggcatcaCAATCGACGTGTTTCAGCCTTAAATGGAGCAACTGCTACTGGTGTCACTGGCGGCGGCGAGGACGACGATGAGAATGACGATGACGATGAAGCTGGCGACGGGGATGCAGACGAAGATGACGACGCCGCAAATTCTAGCGAAGAAAGGGTTTTCCTTACGTCAAATGGTGGTGGTGCCAATGATGCTGTTGGAACAAACACCACAACTACCACTTCCACCACCTCGACGAAGAGCATCAGTGGCGCAACCAGCATTGGCGGCGGCGGCGGTGGCGGTGGCGGTGACAAACATTCCGTGAAAATTCCAACGAAATTGCGGAAAATCGATAGGGATTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGATGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGGTATCTCAAGAAGCATGAACAGAGTCATGCCGAGCACCTACCATTCAAATGTGACTACTGTGCGAGACTTTTCAAACACAAACGATCTCGTGACCGACACACTAAGTTACATACTGGAGATAGGCGATACAGGTGTCCACATTGTGAGGCGGCATTTTCAAGAAGTGATCATCTAAAGATCCACATGAAAACTCACGACAACCAAAAGCCATTTCAATGCACCATCTGCAATCGAGGCTACAACACAGCTGCAGCACTAACATCACACATGCAAAATCACAAGAAACAAGCTGCAATCTTAGCTGCTGGAGGCAATCCAGCGGCACTCACTTACAGTCCCCGTTCAACTGGTTCCGGTTCGAGTAATGGCAGTTTACAAAAACGTCGCTACACATCTATTGCAAACACTAAAAGTCCCAGTCCAAGTTCATTGGAATATGCCAAGCGTATGCGTAGCTCCTATGTCTCATGCATGTATTGCACAAAATCTGACTTCGCATCAATGGAGCAGCTAAGCAGTCATATTCAAGCAATGCACGAGAAGGAAGCACTTGCCGCCAATCAATCAGTGACAAGTGGTTTTCAAATGTCATGTGAATACTGCACAATGAAGTTTCCCAGTGTCCCGGCAATGTTTCAGCACATGCGAACTACACATATTGATCGTTTATCCAGTCCGAGTAGCTATTTCGAGCATTTTAATCGATTAGCAGCAACAGGCACTTTCAGTCCAAGGCTTCCAACACCCAAGGCGAATGAAACAAAGGTCAAAGTTGAAGAGCCCAGTCCTAAAGGTGAGGAAAAAGTCGATGACGAACCAACTGATTTGAGTCAAAATAGGCGATCCGTTCAGACCCCATCGCAGGAATCTGCCGAAGCTAATGACAGGCCAGGTGTTTTCTTTTGCAATCAGTGCAACGATGGTTTTCCCGATTTCGATAGTTTCCGCAATCATCTGAAGTCCCACATTGTCCAAGGACTTAGCTTGGTTTGTCATCATTGTGGTCAGACCCTGCGAGATCAACCAGAATACGAAAGGCATATTATTTCGCATTTTCTCATCACTTGCTCTGAATATGCTTGCACCGAAAAGAACTGTAATAAGACCTTCTCTAAACCGGACGAACTTCAGAAACACCTCTTCGATAACCACATTCAGACGCTCTTCAAATGTCTCTTGTGTTCAGACCTTTTCGAGACAAAAGTTGCGGTGCAAGTTCACTTCGCTTGCATTCATTCCCCGGAGAAGAAGATTTTCCGTTGTTCAGCCTGCATGGATACCTTCCATGGAGAACAAGACTTTCATATTCATGTGAAAACTCGACATCAGACAATAGTTGGGTCACCAATTCAATGCATGTTCTGCCGAGCTGTCTGTTCCACCGAACTTGAAATGCATTTCCATCTCGCGGCTCATGCTCGCCAGTTCCGTTGTCCTTCGTGTCCCGAGACTTTTCATGTCGAATTCCTACTTGATCGGCATATGCAAACTCACCATCATGGACAAAAAGAAGTTGAGTCCACACCTCCTCCTTCTATAAATCCATCTCCAGTGAACCCCATCAATCCACTTTACATGAGTGCTCTCTTCAATAAGCCACCTCCATCAACTCAAAACAACAATAACAGCATCCTGGACTATAATGCTTTCGCAATGGGCAAGAACCTGTTCGGCAATGCCTCGGGGAACAAATTCTACAATCCTCTTCAAGTGGATACGGGATCAGCTATGAAACATCCATCGCTTGTTTATGCAAGCTTGAATCAACGTTACTTCGACACAAATCGAACTATTCTCGAAATGTATAGCCAACATCAGCAGGATAAACTTGGAGCTGGCCCTGTTGCTAGCATGTTCACCAGTCCCAGCAACAACAATAACAGGAACGCACCAAAACTTCCCCAAGAGTCCAACAAGCCGCCAGATCGAGCTATTGTTGCCGGAGGAGGTTTTAGCTGTGGGATGTGTGAACGTAATGATTTTCGTACCGAAGCCGAAATCCACTCACATCGTAAAATCGTGCATAATCTCAAGACCGGGGTGAGTCTGCGATGTGCTTATTGCAGTGGAAACTTTAAGTCACGCAGTGAACTGGAACACCACATGAAGACATGCCACAATTCAACTGGCAAGCATAAGTGTTTGATCTGCGATGAAATCTTTCCATCTCCGGCAATTCTCGCAGAGCATAAGTTGCAACACTCAAAGGTCGGGCAATCGGGAAAGTGCTCCCACTGCGCAAAGGCTTTGCCCGATGTCATGTCGTTCAAGGGACACCTTCTGGATCACAACACCGAGGGACAGATGCCGGTTCAATGCATTTGCTGTCGCCAAACTCTTAATTCGGACTTTGAAATCGGTCTTCATGCCAAATTCCACACCAAGTCATCGTCTGTTTCTGAGAGCGTTTGTGCCCTGTGCTTGGAAACAATTCCCAACACAATCGATGCCAAGGTTTGTGATAAATGCTGTCGCAAGCACAATCTCAACAACAAGTACTCAAATCAGCGAAGCACCTTTGACAGCAATTCGGGGCACTCAAATTACGTGGAGAACCGTTGTAATCTCTGCAATGTCATCATGCCCCACTCGCAGAAACTCCAAGAACACTTGGTCGAACACACATTTGCTGGCTGCGAAGATAGAGGCTTTTCGTGCTACATATGCTCAGCAGTCTTTACAGCTCCAGCTGGCTTGCTCACACACATGACCGAACACGGAGCAAATTCACGCCCCTACGATTGCAACCTTTGCAGTGACAAGTTCTATTTCCGGGCCGAATTGGATCACCATTTGGTCGATCATGAGACTCGAGATCGTTCAAAAAGCTCAAATGGCAGGGATCCAAGTCCCGTAGCTGATGACAACAAATTATCATTCACCGAACCACCACCACCTTCAGCAGAAGCAGAATCTAAAAAGCTCGAACTCAAACATGAAGCCCTCGAAGAGAAACCAACCGAAGAAGATGACGATGAATACATCGAAGTTGAGAAAGTCCCCGAAACTATTACATCGCAGGAGAAATCATCACGTCCTTCCGATAAGGACGATTAG
Protein Sequence: MQEQEQYTKRCDLFCDMTPTTEGVLIKDSISILESYLYSTHTSSSYSPSMSDGTITPNSLHHHHLHHHHHHHQQQQQQQQRLHHHLQQQYHCEQQQNSGSGGGHNRDRHHNRRVSALNGATATGVTGGGEDDDENDDDDEAGDGDADEDDDAANSSEERVFLTSNGGGANDAVGTNTTTTTSTTSTKSISGATSIGGGGGGGGGDKHSVKIPTKLRKIDRDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPAALTYSPRSTGSGSSNGSLQKRRYTSIANTKSPSPSSLEYAKRMRSSYVSCMYCTKSDFASMEQLSSHIQAMHEKEALAANQSVTSGFQMSCEYCTMKFPSVPAMFQHMRTTHIDRLSSPSSYFEHFNRLAATGTFSPRLPTPKANETKVKVEEPSPKGEEKVDDEPTDLSQNRRSVQTPSQESAEANDRPGVFFCNQCNDGFPDFDSFRNHLKSHIVQGLSLVCHHCGQTLRDQPEYERHIISHFLITCSEYACTEKNCNKTFSKPDELQKHLFDNHIQTLFKCLLCSDLFETKVAVQVHFACIHSPEKKIFRCSACMDTFHGEQDFHIHVKTRHQTIVGSPIQCMFCRAVCSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHHGQKEVESTPPPSINPSPVNPINPLYMSALFNKPPPSTQNNNNSILDYNAFAMGKNLFGNASGNKFYNPLQVDTGSAMKHPSLVYASLNQRYFDTNRTILEMYSQHQQDKLGAGPVASMFTSPSNNNNRNAPKLPQESNKPPDRAIVAGGGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKALPDVMSFKGHLLDHNTEGQMPVQCICCRQTLNSDFEIGLHAKFHTKSSSVSESVCALCLETIPNTIDAKVCDKCCRKHNLNNKYSNQRSTFDSNSGHSNYVENRCNLCNVIMPHSQKLQEHLVEHTFAGCEDRGFSCYICSAVFTAPAGLLTHMTEHGANSRPYDCNLCSDKFYFRAELDHHLVDHETRDRSKSSNGRDPSPVADDNKLSFTEPPPPSAEAESKKLELKHEALEEKPTEEDDDEYIEVEKVPETITSQEKSSRPSDKDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542500;
90% Identity: iTF_00427670;
80% Identity: -