Basic Information

Insect: Dasysyrphus albostriatus
Gene Symbol: RREB1
Assembly: GCA_946251825.1
Location: CAMIUB010000500.1:736616-743197[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.033 5 8.8 0.8 1 21 232 252 232 254 0.93

2 14 0.00031 0.046 15.2 0.2 1 23 264 286 264 286 0.98

3 14 8.9e-06 0.0013 20.0 5.2 1 23 292 314 292 314 0.98

4 14 0.03 4.4 9.0 2.8 2 19 518 535 518 535 0.97

5 14 4.3 6.4e+02 2.2 0.6 1 19 581 599 581 601 0.78

6 14 0.0082 1.2 10.7 0.1 1 23 750 772 750 772 0.97

7 14 0.00017 0.025 16.0 1.7 1 23 781 803 781 803 0.99

8 14 0.00043 0.064 14.7 2.0 1 23 809 832 809 832 0.97

9 14 0.00088 0.13 13.8 2.1 1 23 1178 1201 1178 1201 0.95

10 14 8e-05 0.012 17.0 0.3 2 23 1510 1531 1509 1531 0.97

11 14 0.13 20 6.9 6.3 1 23 1537 1560 1537 1560 0.97

12 14 2.8 4.2e+02 2.7 6.3 1 23 1663 1685 1663 1686 0.95

13 14 0.078 12 7.6 1.1 3 23 1735 1755 1734 1755 0.91

14 14 0.0013 0.19 13.2 4.8 1 23 1761 1783 1761 1783 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.033	5	8.8	0.8	1	21	232	252	232	254	0.93
2	14	0.00031	0.046	15.2	0.2	1	23	264	286	264	286	0.98
3	14	8.9e-06	0.0013	20.0	5.2	1	23	292	314	292	314	0.98
4	14	0.03	4.4	9.0	2.8	2	19	518	535	518	535	0.97
5	14	4.3	6.4e+02	2.2	0.6	1	19	581	599	581	601	0.78
6	14	0.0082	1.2	10.7	0.1	1	23	750	772	750	772	0.97
7	14	0.00017	0.025	16.0	1.7	1	23	781	803	781	803	0.99
8	14	0.00043	0.064	14.7	2.0	1	23	809	832	809	832	0.97
9	14	0.00088	0.13	13.8	2.1	1	23	1178	1201	1178	1201	0.95
10	14	8e-05	0.012	17.0	0.3	2	23	1510	1531	1509	1531	0.97
11	14	0.13	20	6.9	6.3	1	23	1537	1560	1537	1560	0.97
12	14	2.8	4.2e+02	2.7	6.3	1	23	1663	1685	1663	1686	0.95
13	14	0.078	12	7.6	1.1	3	23	1735	1755	1734	1755	0.91
14	14	0.0013	0.19	13.2	4.8	1	23	1761	1783	1761	1783	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACATCGATTAAGAAGGAATTAACTGATATTTCGCTGCGAAAAATGGATCGACGCCAATCAACAACATCAGATTCATCTGTCGAGCCCATGGACTTGGGTCGATCGAATTCTAAAATATCCACAGATATGACAGATCATAGCAGCACAACATTGCCAACATCAACACAAATTAAAGATGCCATTTTATCAGATGCCAATAATAAGTATCGCTATGAGTCCGACGCCGACGAGTCTGCCGATGATAGAGATCAGCAAACAAGATCACACAGTCAACATCACTATCATCATCGTCGGCGTGGCAATACGGGACGCGACAAACGAGCTGTCCTCATGGAATGCACCGATAGTCCACATTCATTGCGAAAGAAATTTCGATTCAGCAGTAGCAACCACAATAATGCTATTATACCTGATACTGTGATCAATTTGAAATCAAAAACATCGAATAATGATTCAACAAAATCAACTACAGCTTCAACAAATATTACAGCAACAACAAACAACGAATCGGGATTTGTGGATGCTAGCATAGGTCATGTTTTAAATACATCAGGGTCATCGGCTACATCATCTACATCTTCATCGTCACCTACTTCATCATCATCTGCCTCACCATCAGCTAGTAATGTAGCATCGGCCATATCGAGTCCAGAATCGGGCATGGGTGAACGTGACGATATGAAGTACCTTTGCCCAATTTGTGAAGTAGTGTCGGCGACACCACATGAATTCACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACTTGCCGCATATGCTCCAAGGTTCTATCATCTGCCTCTTCACTGGATCGGCATGTTTTGGTGCATACTGGTGAGCGGCCTTTTAATTGCAAGTATTGCCAATTAACATTCACTACAAATGGTAATATGCACCGTCACATGCGAACCCACAAACAACACCAACAACATTATCATCGCAATTCAAATGGTACAAAAGGTGCAAATGGTACAACATCAAGCTTATTACCAGTTCCACCACTAACTGATCAATCGTCAGCAACTCAAACATCTGCTGCTATTGGTGCTTTACCTTCAAAAACAGCAACAAACACAGGCAATGGTGGTGTTTGTAATAGCAACGGTGACACAATTGCGGGTGGAGGAGATGGTTGTGGTGGCGAAAGCTATGATAGTGATGGTGGTTGCTCAACAGATTCATCGAGTGGCATCAGCCAAAGTTCCAATAACAACAATAACAGCAATACAAACAACAAAAATATAAGCAATTTTAAACGCAAGAGCACTGATAGCTTGGATGACTTGGCCATTATGAAACGACGCGTGAAGACCACGATTAACAACAACAATATTATCGATAACATTCACACCATCCCAGAAAAGAGTGGAATCGAAATACCAGGCGTGATCGAAGAAGTTAAGCAGCAGCAACAACAACAACATCAGCAGAAGCTCTTTTGTCCGGTGTGCAATCGTGATGATTTTGGAGGAATGCTTGCATTGGGAGCTCATATGGACAGCGATCATTCTGACATTCCGGCTAAGTGTCGTCATTGTGATGTAGTTTTTAAAACCCACAAACAGCTAAATGTACATCCATGCACCAGTAAACTTAAAATTACACAAGGTTTTAAGGATATAACGTTTGTTGACTTCTCGAGCGAGAAATTCCCGCTGATTGCAAAGTCTCTGTGCGAGCAGAGTATTCGAGCGCCAGTTGGAGGCCAAAAGTTCGAGTGTTCGAAGTGTTATCGGGCATTTCCATGTGCTAGTGCAGTTGAAATTCACGAAAAAGACTGTACGATGTCAGGTTTGAATCTATTCGTAGACTTTCCCAACCGAAAGCAAAGAGCTTACAGCGAAAGCTCAGCAAATGCAGACGACGATGATAATCGTCGCGACGAGTTTTTTAATCGGCTGTACTTAACTAACAAATCCACAGCACAAAGCATGACAAGTTTGTCAGTATCCTCACCATCTCTGTCCGATGTTAAGTCATCTGAGCTTGAGAAGACACCTGTTAAGAACTCGCAACTAGAACAGTTTCAGGACACCAAAGAACTTGCTGATATTCAATCTATCCTCAATATAACTTCGTCATCGTCAACAAGCAATTTTCTGCGTAACTTTGAAAATTCAGTAAATGCACCTATTAGTAATTATGGTGCTGAAAATGGCGAAGAGGAAGCTCAAGACGCGTTCACATCAGAGTTTCGGAAAATGAAACTGCGTGGGGAATTTCCGTGCAAACTCTGCACAGCTGTTTTTCCTAATTTGCGAGCACTCAAAGGCCATAACAGAATACATCTTAGTGCTGCTGGTCCTGGACCTTACCGATGCAATATGTGCACATATTCCATTCATGATAAAGCAGCTCTTGTCcgtcacatgcgcacccataacggcgataggccttacgagtgtgccatctgTAATTACGCATTCACAACAAAGGCCAATTGTGAAAGACATTTACGGAACCGTCACGCGAAGACCACACGCGATGAGGTAAAGCGTGCCATTATTTATCATCCATCAGAAGACTCAAACTGTGACGATGCCATGAAGAAGTTGCACATGTTTTCATCACCCGAGTTCGATCAAGACGACATGGAGCATCATCATCCGCCCAAAGATCGATCAACTCCGGTATCTCATTTGAAGGAAATGCTTCAAGCCGAATCTAAGCCAATGAAAATCCAAGTGAAGAGTCTTGAAAAATTGATTGATAAACCATCGTTCAATCAACCCGATGAACTCGAAAAAGATCATGAGCCAGTTATACCCGAACAAGAGAAAGAGATTAGTAGGCCAATTGATCTCAGCATGGATGCCCTAGATTTGAGCAAAAAATCAGTGAAAACAGAAAAACTGGAAGAAAAAAGAGCTCAAACTCCCCCACCACCAGCGTCACATATAAATCCAGCTCGTCCCCAAACCGATGAGCCGAACATCGATATGCGACTACTTGAAAAAAACCAACAGCTCCTGCTCGCCCAACAGAGACTTCTTAATGAAGCAATGCCAAAAATGGATCCAGCACATTATTTCCAACTATCGCAGCTTTACAATAACTTAGTGTTCCAGCCGCTTAATCCGTTTTTACTGCAAAATTCCTTTCTTTCAAATAACATAAGTGATTTAAATAAATTCGCTCCCATGGGGAATCCTCTTTATAGTGGCACGCCTGTAGAGGGACCGATCACACGCGCTGATAAACAAAATCAACAAAATTCATTACCGAAACCCGTCCAAGACGAGGTCCATTCTTCAATAAAACAAATTCACTCCCAAACTCAATCACCAGTGCCTGCTCAAAGTCAACCATTACCACGGAATCCAACACCGTCTCTATCACAAATGCCAGCTTTGCCCAGAAGTCATCAACATCTTATAGGTGGAACTCATCCCTCGGGAATGCTTCCATCTTCTTTGCCCAATTCAGGACCTGTTAAAATGGTCATCAAAAACGGAGTTCTTATGCCGAAACAAAAACAGCGACGCTATCGAACAGAACGTCCATTTGCCTGTGAACATTGCTCTGCAAGATTCACCCTGCGCTCGAACATGGAACGCCACATAAAGCAACAACACCCTCAGTACTGGGCTCAACGACAACGAACTGGCCATCACATAATGCGTGGTCGTGCCAACAGTTCCTCGATACACACTCACTTACAATCAGCTCACTCGCCTCTGGAGACGCAACATCCAATAGGCTCTAGTGGCATGATGACAAATCCCTTGAGTGCCATTTCAGATCAAGTAAAATACGCTATACTTGCCCAACAATTAAAAGCCCGTAAAGAGACAGACATTCTGCAGCAGGCTTTATCACAAGGATCCAGCAGTGTGCTCACGCAGAACCCCACATCAGGAATTAGCAGTCTTCGCCAATCGCTCAGTGCATCATCGAATACTAACAATGGCAGCACTGAAGATGACGATCCAAAATTAGTAATCGACGAAGATGACGACGATCAAGGAGAAGAAGAAGAAGAAGATGACGAAGAAGAGGATTGTGATGACCGGAAGCCAGAAAACTTGACCAAATTTCAAGATTTCCCCGAGCCATCAACAAATGAAGCAGCAAAGAAAGTTGCCGAATCTATCCTCGAGCAAGCAATGAAAGCTGGAAGCACTAAGATCTCATACCCCAACGATGAAGATCGTGATCGAACAGCTGGGAAGGATTTCGGCCTCAAGCTCTCGAAGAATATGATTGCTCAAGCGGAGTCAGTGGGCAAATTTCTCAAAGAAGTCGCCAGCTCTCCATTTAAAGATGAGTCAACCGATTTGGTATCGGTCTCGAGGTTAGTTGATAATGCAACTAATTCTATGTCCTTTAATACCTACTTTCGACCCAGTGACGTTGTCAATCAAATGGAGCAAAGTGACGAGGAGGGACTTGTTGCATCGGGTAGTGCATCGGAAAGTAATAATTCTGGTCCAGAAGACATGGTCAGCTCACAAGAACCAAAAAAAAAGTCCGCATATAGTTCAGCTCCTAATCGTGTCTCCTGTCCATATTGCCAGCGAATGTTCCCATGGTCCAGTTCGTTGCGAAGACACATTCTCACCCATACCGGCCAAAAACCATTCAAATGCTCACATTGCCCACTGCTCTTCACAACCAAAAGCAATTGCGATCGCCATCTATTGCGTAAACATGGTAATGTTGAATCGGCTGTTTCATTATATGTTCCCATTGAAGACGTCAATGAGCCTTTGCCAGTGCCCAAATCTGTCGAGGAAATCGAACTACAACAACAACAGCTTCTTCTTCAACAAAAAGAACAAAGAAGGTTAGAAGAACTAAAAGAGTTACAGAAAATCCAACCGCCACTTCAAAAACCATTCGAAGGAAATCAGGAGCAGACACCGAGTATAAATTCAATATCCACCAGTTCTACAAATACCGCTCCTAAACTTGACTCGATTCCGTCCTCTCCTATGATTTCATCCTCAGAGTTGCCATTCAAGTGCCATCTGTGTGACAGTTCGTTTGCAGAAAGATTTCAATGTCTTGATCACATTAAGATACATCATGCTCAAGAATTTTCACTTCTTCTGTCCAAAGGCGCAGTTGACAATGAAGCCGATATTAACAGCCAAGTCCAGTCTACCGAAGATGATGAAAAACGTGACGAAAGCCGAGGCAAGTATCCAGACTACACCAACCGAAAGGTAATTTGCGCTTTCTGTATGCGGCGTTTCTGGTCAACTGAGGACTTGCGTCGAcacatgcgaacacactctggcgaaagaccatttcaatgtgatatatgcCTACGTAAATTCACCCTGAAGCACAGCATGCTGCGACACATGAAAAAACATAGCGGTGGCAGTCATTCCAGCAACGGAGCTGCCAATGCCGGCAACAGCGGGTCTGACGTCTCCGATGATGAACAACCACCATCTAGTGTTATGCTTGCCAATGCCTTACGTTCTCACAAAATCCAAGAGCTTTTCTCAAAAGTCAGCAGTGAATGGCGCAATAATCGTATCTCCGGTGAGCACAAAGAGAACATCGAAGAGCACAATAACCAGTCTGATCTTATTGGCAACTTGCTGGGCATCAGCGATCAAGGCATTCTTAACAAACTGCTTTCGTCAGCCGATGAAGCAGCCAAGTTTCTTGGTGTTGAAAAGTAA
Protein Sequence: MLKTSIKKELTDISLRKMDRRQSTTSDSSVEPMDLGRSNSKISTDMTDHSSTTLPTSTQIKDAILSDANNKYRYESDADESADDRDQQTRSHSQHHYHHRRRGNTGRDKRAVLMECTDSPHSLRKKFRFSSSNHNNAIIPDTVINLKSKTSNNDSTKSTTASTNITATTNNESGFVDASIGHVLNTSGSSATSSTSSSSPTSSSSASPSASNVASAISSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGANGTTSSLLPVPPLTDQSSATQTSAAIGALPSKTATNTGNGGVCNSNGDTIAGGGDGCGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNKNISNFKRKSTDSLDDLAIMKRRVKTTINNNNIIDNIHTIPEKSGIEIPGVIEEVKQQQQQQHQQKLFCPVCNRDDFGGMLALGAHMDSDHSDIPAKCRHCDVVFKTHKQLNVHPCTSKLKITQGFKDITFVDFSSEKFPLIAKSLCEQSIRAPVGGQKFECSKCYRAFPCASAVEIHEKDCTMSGLNLFVDFPNRKQRAYSESSANADDDDNRRDEFFNRLYLTNKSTAQSMTSLSVSSPSLSDVKSSELEKTPVKNSQLEQFQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEHHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDELEKDHEPVIPEQEKEISRPIDLSMDALDLSKKSVKTEKLEEKRAQTPPPPASHINPARPQTDEPNIDMRLLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYNNLVFQPLNPFLLQNSFLSNNISDLNKFAPMGNPLYSGTPVEGPITRADKQNQQNSLPKPVQDEVHSSIKQIHSQTQSPVPAQSQPLPRNPTPSLSQMPALPRSHQHLIGGTHPSGMLPSSLPNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRTGHHIMRGRANSSSIHTHLQSAHSPLETQHPIGSSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLTQNPTSGISSLRQSLSASSNTNNGSTEDDDPKLVIDEDDDDQGEEEEEDDEEEDCDDRKPENLTKFQDFPEPSTNEAAKKVAESILEQAMKAGSTKISYPNDEDRDRTAGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESTDLVSVSRLVDNATNSMSFNTYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVSSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQLLLQQKEQRRLEELKELQKIQPPLQKPFEGNQEQTPSINSISTSSTNTAPKLDSIPSSPMISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAVDNEADINSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGAANAGNSGSDVSDDEQPPSSVMLANALRSHKIQELFSKVSSEWRNNRISGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357374;
90% Identity: iTF_00335372;
80% Identity: -