Basic Information

Insect: Dasysyrphus albostriatus
Gene Symbol: -
Assembly: GCA_946251825.1
Location: CAMIUB010000068.1:2211782-2215830[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.9e-06 0.00044 21.5 0.5 1 23 256 278 256 278 0.98

2 7 0.00091 0.14 13.7 0.6 1 23 362 384 362 384 0.97

3 7 4.7e-06 0.00071 20.9 1.7 1 23 390 412 390 412 0.96

4 7 5.8e-06 0.00087 20.6 2.3 1 23 418 440 418 440 0.99

5 7 1.9e-05 0.0029 19.0 1.7 3 23 448 469 446 469 0.96

6 7 2e-05 0.0031 18.9 1.9 3 23 476 496 476 496 0.99

7 7 4.6e-06 0.00069 20.9 2.0 1 23 502 524 502 525 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.9e-06	0.00044	21.5	0.5	1	23	256	278	256	278	0.98
2	7	0.00091	0.14	13.7	0.6	1	23	362	384	362	384	0.97
3	7	4.7e-06	0.00071	20.9	1.7	1	23	390	412	390	412	0.96
4	7	5.8e-06	0.00087	20.6	2.3	1	23	418	440	418	440	0.99
5	7	1.9e-05	0.0029	19.0	1.7	3	23	448	469	446	469	0.96
6	7	2e-05	0.0031	18.9	1.9	3	23	476	496	476	496	0.99
7	7	4.6e-06	0.00069	20.9	2.0	1	23	502	524	502	525	0.95

Sequence Information

Coding Sequence: ATGGGCAGACAATCCCGAACGTGCAGGGTTTGCACTAAGAGGTCCAAGGACTTCGTTGAACTAGAGGCAATCTATGTGCGAAAACCGCAGATAACTTATCTCGAAGTTTACAACATTTGTACCAATTTGAATGCTGAGGTTGACGATGAACTTCCAAGAAGTCTGTGTTCCTCTTGTAGAAACGAGCTTAAGTCATCTTATAAGTTTCTCGAAAAGGCCCGAGAAACAGATAAGAGATTGAGAGAAAAACTAGGTGTTCATCGGAATACCCGGAGAAGTCAAAGAATAGAAAAAGAAGAAGAGGACAGTCATAGTAATACGAGAGTAACAAAATCAACAGCGCGATTAGAAGCTCACGGATCAGATGATGCAGAACCCGATTTCGAAGAGATCAAACCTGAGTTCATCAACTGCACAAAGGATCCATTAGAGGATTCTGATCTAGAAGTTAATGAAAAGTCTGAGGATGAAATGGACTGGGTACCTGATGATGCTGATGACCTGGAAATAGATGGCTTTGCTGGGACGAAGATAACACCTTTCGAAGACGATGATGACGATGATAAACCACTCAAGCAGCTAATAGAAAAACAACTTGATAAGGTAAACCCAGATTACGATTCATCAGATGTCTTCAATGACCTCCCAGACCTAGCAGACAATGAGTCGTCCGAAAACGAAGATGATGTGTTTAGAGATAAAATGTTGGAAATCGTGCCAGATCCCCCAACAACCCAAGAAGCGCAGATATTCCCCCAGGGTCGCTATATGTGTAAAATTTGTAAGAAAACATACTTCACCGCAGAAGGACTTAAAGCCCACATGAATGTCCATATGCTCAAAAAGAAAACAGTTAAACGCATCCGAGGACCAAATAAGAAAAATTCAAAAAACAAAAAGAAAAAGAAGAATGCAAGTGATGACGATGATGAGGAAGACGATGAGGGCTTACAAGAAAAAGATGGCAAAGAGGGTGACACTGAAAAGAACGAGGCCAATACTGAAGTCTCAATTGAAGCTAAACAAGATGACTCGGATGTAAAAAAAAAACGCAAAATCAAACCCCCGAAACCAAAAAAGATGTTCCCCTGCAGTGTGTGCGGCAAGCATATGATATCGGCCTCGAAATTGCGCTATCATATGGTCATGCACACCGGCGAAAAAGACTTTTTGTGTACAATGTGTCcaaaagcttactcaacgatctatgcacttaaacatcacatgcgcactcataccggcgaaagaccatacgagtgtaagttttgcggcgataaatttacccgaccaacaacacttaagtcacatatgcgacgccatacaggcgaacggccttatggttgtgatatatgtggaaaacgttttattcaacactcttcgatgacgacacacatgaaactcaaccacatggcaaaaactattggctgtccgcactgtgataaaaaatacgcccgccaaacagatctgaatacccatctactcagccatacgggcgataagccttTTTCGTGTTCTATATGTCCGAGTCGATTTATTCGACAAGCGAATCTTAACAAACACATGAATCAGCATCATTCGGCCAAGAATAAAACACCCAACAACCATTCGACTGCAAAAAAACCGTTAGAAATAAAGACTGATGAACCGTTGGTGGAACAATCTATGCCACAGGATGCAAACAGCAGCCAGTCGATAGAGCAAGTCAGCGAATATGTCGAACAGAGTATTGACAAAGGATCAAAAACCATTCAGTTTGCTGGACAATCATTAAATTCTAAAATGCAAGTTCCGATCTTAACGGGGAACAATCAAATGCCTGAGCAAAAGATCAATGAGTCTCACGGGTCAGCTATCGATCAGTTTACTGGACAAGTAATGCAACAAAAAATTTCGGCGGCAACAACGACGACAGCTAATAAGTTTAGTGGCAATGTTATGGAGCAAAAAATCAACTTCGCCATAACAACGAACCAATACACTCCGGTTCAACAAAGACAACAACAACAACCAAATATTTCGCCTTTACCGAAAATGGTTAATGTTCGATCTTTAGCCAGGCCAATGCAGAAGGGACCAGCAATTATAGTGAGACGAGGTCAGGAAACTTCAACTCCCCCTGGCAGCGAAGAAAGCAATAGTAGTAATCGTTTCCTACCACCGCCTCCCCTATCATCGCCAAATGCATCATCACAAATGAGACATCAGCAAATGCATCAAAATAATATGCTAGCACCACCTCCTGCGCAACAACAACGTTTGCCCAACAATGAGAATAGTATGCCCATTAGTATGAATATTGCTGGGATTCCTGGGGGTATTCCGACGCATAGTATGGTGGGTACCAGCGGAGTTGTTCATATCGGACAGCATGGGCAAATGGGATCCGTTGAGCATTTAAAAGGCATTCATCCTCCAGTTGATAACTTAACAAACTTGCTGGGTCAAGTAATAGACCCAGAACGAATTGGACGTTCAGTAGAAGAAATGATTCCTTGGACTTGGTCAAATACTTCATAA
Protein Sequence: MGRQSRTCRVCTKRSKDFVELEAIYVRKPQITYLEVYNICTNLNAEVDDELPRSLCSSCRNELKSSYKFLEKARETDKRLREKLGVHRNTRRSQRIEKEEEDSHSNTRVTKSTARLEAHGSDDAEPDFEEIKPEFINCTKDPLEDSDLEVNEKSEDEMDWVPDDADDLEIDGFAGTKITPFEDDDDDDKPLKQLIEKQLDKVNPDYDSSDVFNDLPDLADNESSENEDDVFRDKMLEIVPDPPTTQEAQIFPQGRYMCKICKKTYFTAEGLKAHMNVHMLKKKTVKRIRGPNKKNSKNKKKKKNASDDDDEEDDEGLQEKDGKEGDTEKNEANTEVSIEAKQDDSDVKKKRKIKPPKPKKMFPCSVCGKHMISASKLRYHMVMHTGEKDFLCTMCPKAYSTIYALKHHMRTHTGERPYECKFCGDKFTRPTTLKSHMRRHTGERPYGCDICGKRFIQHSSMTTHMKLNHMAKTIGCPHCDKKYARQTDLNTHLLSHTGDKPFSCSICPSRFIRQANLNKHMNQHHSAKNKTPNNHSTAKKPLEIKTDEPLVEQSMPQDANSSQSIEQVSEYVEQSIDKGSKTIQFAGQSLNSKMQVPILTGNNQMPEQKINESHGSAIDQFTGQVMQQKISAATTTTANKFSGNVMEQKINFAITTNQYTPVQQRQQQQPNISPLPKMVNVRSLARPMQKGPAIIVRRGQETSTPPGSEESNSSNRFLPPPPLSSPNASSQMRHQQMHQNNMLAPPPAQQQRLPNNENSMPISMNIAGIPGGIPTHSMVGTSGVVHIGQHGQMGSVEHLKGIHPPVDNLTNLLGQVIDPERIGRSVEEMIPWTWSNTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00664323; iTF_01318493; iTF_00665110; iTF_00894232; iTF_00427546; iTF_00335358;
90% Identity: iTF_00427546;
80% Identity: -