Basic Information

Insect: Dasysyrphus albostriatus
Gene Symbol: -
Assembly: GCA_946251825.1
Location: CAMIUB010000114.1:2480412-2487767[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.013 2 10.1 0.5 2 23 114 136 113 136 0.96

2 20 0.0043 0.64 11.6 0.8 1 23 142 164 142 164 0.98

3 20 5e-05 0.0074 17.7 1.3 2 23 173 194 172 194 0.98

4 20 0.0013 0.19 13.2 0.9 1 23 200 223 200 223 0.96

5 20 0.00058 0.086 14.3 2.1 1 19 255 273 255 275 0.97

6 20 2.4e-07 3.6e-05 25.0 1.1 1 23 283 305 283 305 0.98

7 20 1.8e-05 0.0027 19.1 0.8 1 23 311 334 311 334 0.98

8 20 0.0054 0.81 11.3 1.7 1 23 344 367 344 367 0.95

9 20 2e-06 0.0003 22.1 2.4 3 23 464 484 462 484 0.97

10 20 2.8e-07 4.2e-05 24.7 1.2 1 23 490 512 490 512 0.99

11 20 0.001 0.15 13.5 0.5 1 23 523 547 523 547 0.97

12 20 0.0019 0.29 12.7 1.3 1 20 553 572 553 574 0.93

13 20 0.32 47 5.7 3.4 1 23 612 634 612 634 0.97

14 20 6.4e-07 9.6e-05 23.6 1.4 1 23 640 662 640 662 0.99

15 20 4.6e-05 0.0069 17.8 1.2 1 23 668 690 668 690 0.96

16 20 4.5e-05 0.0067 17.8 2.3 1 23 696 718 696 718 0.97

17 20 7.8e-07 0.00012 23.4 3.5 1 23 819 841 819 841 0.98

18 20 4.4e-05 0.0066 17.8 0.6 1 23 847 869 847 869 0.99

19 20 1.1e-05 0.0017 19.7 0.5 1 23 876 898 876 898 0.97

20 20 0.00022 0.033 15.6 4.3 1 23 904 926 904 927 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.013	2	10.1	0.5	2	23	114	136	113	136	0.96
2	20	0.0043	0.64	11.6	0.8	1	23	142	164	142	164	0.98
3	20	5e-05	0.0074	17.7	1.3	2	23	173	194	172	194	0.98
4	20	0.0013	0.19	13.2	0.9	1	23	200	223	200	223	0.96
5	20	0.00058	0.086	14.3	2.1	1	19	255	273	255	275	0.97
6	20	2.4e-07	3.6e-05	25.0	1.1	1	23	283	305	283	305	0.98
7	20	1.8e-05	0.0027	19.1	0.8	1	23	311	334	311	334	0.98
8	20	0.0054	0.81	11.3	1.7	1	23	344	367	344	367	0.95
9	20	2e-06	0.0003	22.1	2.4	3	23	464	484	462	484	0.97
10	20	2.8e-07	4.2e-05	24.7	1.2	1	23	490	512	490	512	0.99
11	20	0.001	0.15	13.5	0.5	1	23	523	547	523	547	0.97
12	20	0.0019	0.29	12.7	1.3	1	20	553	572	553	574	0.93
13	20	0.32	47	5.7	3.4	1	23	612	634	612	634	0.97
14	20	6.4e-07	9.6e-05	23.6	1.4	1	23	640	662	640	662	0.99
15	20	4.6e-05	0.0069	17.8	1.2	1	23	668	690	668	690	0.96
16	20	4.5e-05	0.0067	17.8	2.3	1	23	696	718	696	718	0.97
17	20	7.8e-07	0.00012	23.4	3.5	1	23	819	841	819	841	0.98
18	20	4.4e-05	0.0066	17.8	0.6	1	23	847	869	847	869	0.99
19	20	1.1e-05	0.0017	19.7	0.5	1	23	876	898	876	898	0.97
20	20	0.00022	0.033	15.6	4.3	1	23	904	926	904	927	0.96

Sequence Information

Coding Sequence: ATGCAAAACAACACCGATTTGTTTACTCCACTACCAGTGGAGTTATCCACTCCCAATGGACTCCTTTATCAATTCACCGAGGAGAAATTTCTTAAACATGATTTCTATACCTTCGAAATGGATTGTTTTACTGTGCCTGAAATGAACGATATTCCACCTCCCATCGTTGGTTTGAGTCCAATTCCAGAAGAAACAAGTTGTCCGTTGATGGTACATCATTTGGAACCTATGCTGTTTTCTCCTGTAGAACCATCTACAGTTCCGGGTCTATTGTCTCCATCAGTTCCCAAATCAAGTTTGGATCAAGAAAAGCTACCAGCGAGAGCAGCCAAACAACTTTCATGTGATCTATGCGAAGAGAATTTCTTCTCCACTCAGGCTCTTCGTCTTCACAGGCGAATTCAACATATCTCGGTTAAAGAATTTCGCTGTCGAAAGTGTCCGTCATCGTATAACTTTGAATCAAATCTTCTTCTTCATTTGGCATCGCATGTTTCGAGTTGTAGTACGAATAAGCAATGTCCTGAGTGTAAAATGGTGTTCAAACGCATCTCCAGCTTCAAGGGACATTTAAAGACGCATCAAACTAGCGATAGATTCAAGTGCAGTCGTTGTGATAGGGAATTCGAACTGAAGGGCTACTATGAAAAGCATCTGGCGAAAGCACACAAACCAGGTGCTGATGGTACTATCGAAGAAATTCTGTTGAAAGTGGCAAATAACACAAAATGTCGAAGAACATCAAAGAAAGTCAATGGCAAATATCGGTGTCAATATTGTGAGAAGAAATTTGCCAAACCTTGTTTGTTGAAACGACATGAAGTTTGTCATACGGGAGCTAAACCATTCCAATGTACCCAGTGCGATCAGGGATTTACACAAAAGTCCTCCCTCGAAAGGCATATGCTTCTGCATCAGGGTGTAAAAGATTTCAAATGTCCCATGTGCAGCTATAGCTCCTCTCAAAAGAACAATTTGATTGTTCACATACAAAGAACACATCCTACTAACGCTATTGTCGAAAATATGTTTGCTTGTGAATTTTGTTCGTGTGTGTTCACAAAATTAAGCAGTGTAAATCGTCACCGAGCAATGGTGCATCCAGAAAAGGAGAACTCAACCGGTCAGGATGTGTTCAAAGCAAATGACGAGGATGAAGACGATGATAATGTGACAGTTGCTAGAGTTATGGAACAGTTAAAAAGTTTTCAAGAATCCATGGGAATTATGGATATGAAACCACCCGCATTGGAACTTTCGCTTATGAAACCACCATCACCTGGACCGATAGTCAATACAGTTACCATTGTTGATACAATCAATCCAAAAAAAGAGAAAACGTTTAAGAAAGTCAAGGAAATCATCTACAAAGGAGAACGTACAATTGCTTGTGTTTATTGTGATAAACAATTTAAAAGGCAGTATGATCTATTGAGacaccatcgaactcacaccaaagaaaagccattccagtgtaatatttgCACTAAAAATTTCTCCTCAAATAGTGGCCTTAAGATACATCTCAACACTCATACCTCATCTGAAGCAAAGCCAGCTAGAGCTTATGAATGTGCGGCAGATGAGTGTCATAAACGTTTTGCATCGTTGCGTGCCTTAGATATTCACACAAAAACCCACTCAAATTCCATATCGTATATTTGTCCAATTTGTTCGAAAATCTTCACATCCAAAGCAGGATTTTCTTCGCACAAACATCATACAAAAGATCAAGAACTCGATAGTATTCGTGACTTGTTAAAGTCACCTGTAAAAATTGAAACAAATAAGGCCGAAGAAGCTTACAAGGCCGAAGAGTATTTGAAAAGAAGCCACCAGTGTTTTGTGTGTGGCTTGAAAATGCAAAAGTTATCTCATCTTCGGCAGCATGAAGCCACTCATACGGGAGTGAAACCATTTCAATGTGAAATCTGTTTTCGGTCCTACACAACTCAAAGTTCTCTCAATCttcatatgaaaatccatacagctgagaaaacccacatctgccaagtgtgcgatgcgaagttcttCACACAATCCTTGCTCCTTCGACACATGATATCGCACAATAATGAACGGAACTTTGCCTGTCCCTACTGCGATGAACGTTTCAAAACGAACGAAAATTGCAAGAATCATATTTTAACTCACGCCCGGAGTTTATTGGCAAGTCCTGAACCTCCACCGCCGCCACTAGATGAATACGTCATGGATGTTGATGAAATTTCAGAAAAACCCTCTGTAAATTCCATGATAAAGCAATATATTGCCGTTGTTGAAAGTCCCGAGAAGAATCTCTCGCCAAAGTTCCTTCAACTCGAATTGGTCAGAAAATGTAAAAAGCATAAGCACAAGAATTTGACTATCGAAACACTTACAACCTCAAAGAAAACATCTTCTACGTCCAAGAAATCCCTAGAACGATCGGTCAGACAGATAAGTCAAGCTGGAcacaaatgctctgaatgtgggaagattttcttcaaagccagtgattttaaacgtcatattcgaactcatacaaaagaaaagccttatcagtgcagtatctgttcgaggcaatttgcattaatgtcgaccttggtgaatcatatgcagacacatgacgcgcagagaaagacattcgactgtcaggtgtgtggcaagaagtattcatcgcagaaagttttgacagtacatttacgaattcatacaggtgagagaccttttcaatgtggtgtatgtaagaagacttttcgaacttcaggacataaaatttcacatATAAAGGCGCATCATAAAAAGAGAAAGTAG
Protein Sequence: MQNNTDLFTPLPVELSTPNGLLYQFTEEKFLKHDFYTFEMDCFTVPEMNDIPPPIVGLSPIPEETSCPLMVHHLEPMLFSPVEPSTVPGLLSPSVPKSSLDQEKLPARAAKQLSCDLCEENFFSTQALRLHRRIQHISVKEFRCRKCPSSYNFESNLLLHLASHVSSCSTNKQCPECKMVFKRISSFKGHLKTHQTSDRFKCSRCDREFELKGYYEKHLAKAHKPGADGTIEEILLKVANNTKCRRTSKKVNGKYRCQYCEKKFAKPCLLKRHEVCHTGAKPFQCTQCDQGFTQKSSLERHMLLHQGVKDFKCPMCSYSSSQKNNLIVHIQRTHPTNAIVENMFACEFCSCVFTKLSSVNRHRAMVHPEKENSTGQDVFKANDEDEDDDNVTVARVMEQLKSFQESMGIMDMKPPALELSLMKPPSPGPIVNTVTIVDTINPKKEKTFKKVKEIIYKGERTIACVYCDKQFKRQYDLLRHHRTHTKEKPFQCNICTKNFSSNSGLKIHLNTHTSSEAKPARAYECAADECHKRFASLRALDIHTKTHSNSISYICPICSKIFTSKAGFSSHKHHTKDQELDSIRDLLKSPVKIETNKAEEAYKAEEYLKRSHQCFVCGLKMQKLSHLRQHEATHTGVKPFQCEICFRSYTTQSSLNLHMKIHTAEKTHICQVCDAKFFTQSLLLRHMISHNNERNFACPYCDERFKTNENCKNHILTHARSLLASPEPPPPPLDEYVMDVDEISEKPSVNSMIKQYIAVVESPEKNLSPKFLQLELVRKCKKHKHKNLTIETLTTSKKTSSTSKKSLERSVRQISQAGHKCSECGKIFFKASDFKRHIRTHTKEKPYQCSICSRQFALMSTLVNHMQTHDAQRKTFDCQVCGKKYSSQKVLTVHLRIHTGERPFQCGVCKKTFRTSGHKISHIKAHHKKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00664262;
90% Identity: -
80% Identity: -