Basic Information

Gene Symbol
bdp1
Assembly
GCA_946251825.1
Location
CAMIUB010000009.1:482345-483913[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-08 8.5e-05 23.6 0.0 3 44 422 463 420 464 0.95
2 2 7.5 1.9e+04 -3.1 0.1 23 35 505 517 498 518 0.64

Sequence Information

Coding Sequence
ATGTCGACACGACGGCCTAGAATCAAGGCCTCTGCCAACTTGGCCTTAGCTTCAAAACGTAAACCCAAAAACAACACGGAGGTAACATTAATTAAACCCAAAGATGAACCGTCTGATATCAAAAATAATAAGTCTACAGAAGTGAAATTGGAACATCTTTTATTATCAGATGAAAGTCTTAAAATTCAAAATAATGTTAATGAAAGTCAGGTAATTGAAACAGCAGCTCCGCCCGAAATTGCAGTTACTGTCCACACTAAATCTCTCTTGGAGAATGTTATCATTGTCAACCATGAAGAACCCGTACAACAAACACCATCACCCTCAACCCTAAGGACTGTCACTACAACTGATAAATACTCAATTTCGTCTCACACCTTGGATATTGCACCAGAATCTTTAACAGTAGAAAGTCCAGTTATCACCCAGAACTCATCTGGGAAAACCTTACAAAGCTTTGAAGATGCCTTTAAATATCCCTTCAACCCGGACTACAAACGCTCTTCGGCAATTATCTCCCTTGTGGAAGAAAATACTGCCTCTGAATTGGAAGACAATATTCTTCACATGGATTTGCAGAAATCACCCGGGTTCCCAATGTCCCCGACCAAATCTCGGCAAAGAATACGACCTACACCGATCTTTGGTCAAAGACGTAATAGTTTCGTAGGAACCAGTCCATCACCACACACAGAAGATGAAACGACAGGAACAACACGCCAGAGAAGCTCAAATAGTACTTCATCGGATATATCAGGAAATTTTTTTATGAGAAAACTAGCAGCCGGAAATTTAGGACGAATACGTACCGAATCAGGTTGCTCTACAATATCCGAGTCACGAGGCTCTTCACGAAAAAATCCTAACGATGAACACAACAAATCCTTAAAGAAAGAGTTTCAAATGCGTTTTAACGGTGGAGTTCCAGACAAGTCGACATTGAAAATGTTTGATCTCATTTACTACAATCCATCTACAAATCCCATGGAAAAGAGACCAACTGGGGCGACACAAGCAACTGAAAAAACTTCAGAAGAAGTAACTGGATCAGAACCAAAGGGTCCAACTGTTAATGAATCTGCAATGCCAGTTCCACAATTGAAACTTGGTTCTAACGGAGAGCTTATGATTGATGAAATGAGTTTAGAAATTGAGACAACTGCTGAAGTGGAAGCAAGGAAAGTTCTCGCTAACACTAGTCTGATATATCACGACGAAAATACTGGTGGTGAGGGTTTCTATAAGAGAACTAAACGCACAAAAGATTGGCCACCCGATGAGACAATCAAATTTTATAGATGTCTACAGACTGTGGGAACGGATTTTTCTTTAATGTTAACTCTATTCCCAAATCGTACTAGGAGAGATCTTAAACTAAAATTCAAGAAGGAAGAACGTTGTAATTTGAATTTGATTAACAAAGCTCTACTATATCCCGGGACATTTAATATTGAAGATTTGAAGGAGCAATTGGATGCGGAAGACAAAGAACGGCTTGAACAGGAACGATTATGGAAGGAAATCAAAGCAAAAGAGGCTAAGAAAACAAAAAAGGTAGGTACATGTTGA
Protein Sequence
MSTRRPRIKASANLALASKRKPKNNTEVTLIKPKDEPSDIKNNKSTEVKLEHLLLSDESLKIQNNVNESQVIETAAPPEIAVTVHTKSLLENVIIVNHEEPVQQTPSPSTLRTVTTTDKYSISSHTLDIAPESLTVESPVITQNSSGKTLQSFEDAFKYPFNPDYKRSSAIISLVEENTASELEDNILHMDLQKSPGFPMSPTKSRQRIRPTPIFGQRRNSFVGTSPSPHTEDETTGTTRQRSSNSTSSDISGNFFMRKLAAGNLGRIRTESGCSTISESRGSSRKNPNDEHNKSLKKEFQMRFNGGVPDKSTLKMFDLIYYNPSTNPMEKRPTGATQATEKTSEEVTGSEPKGPTVNESAMPVPQLKLGSNGELMIDEMSLEIETTAEVEARKVLANTSLIYHDENTGGEGFYKRTKRTKDWPPDETIKFYRCLQTVGTDFSLMLTLFPNRTRRDLKLKFKKEERCNLNLINKALLYPGTFNIEDLKEQLDAEDKERLEQERLWKEIKAKEAKKTKKVGTC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00893828;
90% Identity
-
80% Identity
-