Dalb034864.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- -
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010001032.1:139860-146726[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-09 1.6e-05 25.6 0.0 3 37 15 49 13 54 0.91 2 2 2.9 4.9e+03 -1.6 0.0 10 23 57 69 56 70 0.78
Sequence Information
- Coding Sequence
- ATGGCTAAACAAAGTCCAAAACCACGGAAAACCTGGCGAAAGGAGGACATGATGGAAGCCATATCCGCAATGAACAACAATTTAATGGGATCTTCGAAGGCGTCCAAAACATATAATGTTCCGAGAACCACACTGAGGCGATTGGTGGCAAAGAAAGAAGTACCATTGGAAGAAGTGCCGACTGGAACATCCTTAGCGCGAGCTTCCGGATTCTCGAAAGAAAACGTCGCCATTTTTAATGACAATCTGGAATTGCTTATGAACAGATACCATTTCGCGCCAAATAATATATATAACGTGGATGAAACGGGTATTTCTGTTGTTGTGCACATTTTATCGATTCCTCCGCATTCGAGCCATAAAATACAGCCGCTCGACAAGACCTTCAGGGGACCCTTAAAAAAGTACTTGACTAAGGAAATTAGTCGATGGGTCATCAATAACACAAAAGCCCTAACACACTACGACATAATTGAGCTGTTCGGTCGAGCCTTCCTTAAGACTCAGACTGGAGAGATCGCAGTTAAAGGTTTTTCATCGACAGGCATATGCCCATTTGACAGAAATATCTTTCAAGACCACGATTTTTTAGCTGCAGAAGAAGTTGATAACACCGAATTTCAACCTAATGTAGAAAATCTTGTGCCTACCAATCCATGTGATATTGAGGGGAATATGCCAGATCCAAATGTGCCTTCAACCTCAGCTGGAATAAAACCAATTGCTGAAAAAATTAAATCCAAACCAAATCCTCCAACTTTTGCTGAATCGGAATTGCAGGCCTCGGGAACTATTCCAGTTGCAGCTCCATCTCCATTCTGTTCAGGCAGTGATTCAGCATCCGAGGCTGGTGCGAGCGTAGAGCAGTTTATATTTTCGTTGTCTGCTGAATCTGAACATGGTATTTCGGAAAGAGCTGATGGAGTAAATGCTAGGTCCGATACAGAGCCGGACGTGCGAGTGGTGCAAATGCCTAGGGCGTTGAGCCCAATCGGTGCCTAG
- Protein Sequence
- MAKQSPKPRKTWRKEDMMEAISAMNNNLMGSSKASKTYNVPRTTLRRLVAKKEVPLEEVPTGTSLARASGFSKENVAIFNDNLELLMNRYHFAPNNIYNVDETGISVVVHILSIPPHSSHKIQPLDKTFRGPLKKYLTKEISRWVINNTKALTHYDIIELFGRAFLKTQTGEIAVKGFSSTGICPFDRNIFQDHDFLAAEEVDNTEFQPNVENLVPTNPCDIEGNMPDPNVPSTSAGIKPIAEKIKSKPNPPTFAESELQASGTIPVAAPSPFCSGSDSASEAGASVEQFIFSLSAESEHGISERADGVNARSDTEPDVRVVQMPRALSPIGA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -