Dalb014389.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- -
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010000158.1:1284231-1297439[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-10 3.7e-07 30.8 0.0 1 38 14 50 14 55 0.95 2 2 3.8 6.5e+03 -2.0 0.0 30 41 251 263 248 266 0.78
Sequence Information
- Coding Sequence
- ATGGCACGAATTAAGAGACCACGCAAAATAGGATCTCATACAAACGAGCAAATGAAAAGTGCACTACAACTGATTCAAGATGGAATGACAATAAGGCATGCTGCTACAGCATTAGCAATTCCTTATACAACATTAAGAAGGTATTTTCAAAAAGTAAAAACTTTAAACGAAGAGCAAGTGAAAGCAATGAGTCTTACACCAAACTATTCTGTAAATCGTGTATTCTCTGAGGAACAAGAAGTCACTTTTAAGAACTACCTAAATAGCTCATCCTTCTTATTTTATGGCTTGACGAATTTAGATTGCCGGAAGTTGGCCTATGAAATGGCAATTTTAAATAACTTAAAATTTCCTGAATGTTGGAAAAGAGAAAAAATGGCTGGTGTTGAATGGATGAGATGTTTTCGTGCCAGACATCCTGATTTGAATCTTGGATCACCTAAAAAAGTAACATCAACCAGAGGGGTTGAGGCGGCCATTCCACCTGCCATTGTTTTTCCCAAACAAAAATTTAAAAACGATAATATGCTGAAAGATGATGCAGGTAATTTGGACCAAGCTGTACCAAGCAAAAATGAGCTATTTTCTCAAAAAATGAAACACTTCACTCAACATAGCAACTCATGCATGAAAAACTCAACGATGTTTGATAACCATAAATCACACCTCTCTATTGAATCATTTCAAATGGCAAACTCCAATAGGGCTACATCGAGATTGCCTTTCGTTAAAGATGAAATTGAAATCGAAAACAATACTCTACAAGAAACATTTATTAAGGGTATTCCAAAACAACAGTATGAAAATCCAATTTCTCAAATACAGCAAGAAACTGCTCAGAATTCATTATGGGATTTTGAACCATCTAAAGAAACTTTAATCACGGAAAAAACTAGTGAAAGTCAGAAATATCTTCGATCATTGCCTGCACACTCCAAAACTTTTTCAAATGAAAGTCATGGTCTTAACTTGAATAGTATTGAACAACAAAATACAAAAGTAGAAGAATCTTTGAGTTGGATGAGGGCACTTATAGATGTAAAAGCAAAAGGTGATGGATTCGCAATTTTTGGAAGCATAAATCGAGTGAACATAGTGCATAACATCAAAGTCGAAAGGCAGCTTGGCGAACGAAAACACAGGAAGAAGAAGAAGAACAACAACAGCGGCAACAACAGCAACAACAACAACACTGACAACAATGCTGCTCATTGTGTTAACAGGGAACTCTTCACTTGTAACTGCCTAAACAGAACGAAATACGGAGCTGGAATAGATATCAAAAATGCTGCAGCTGGAGCTGCAAAAGTTGAACAAACTTTTGCTGCAGCATTTTTGACATCTATTCCAGCTACGTCTCCGATTCGGTTCTGGCAATAA
- Protein Sequence
- MARIKRPRKIGSHTNEQMKSALQLIQDGMTIRHAATALAIPYTTLRRYFQKVKTLNEEQVKAMSLTPNYSVNRVFSEEQEVTFKNYLNSSSFLFYGLTNLDCRKLAYEMAILNNLKFPECWKREKMAGVEWMRCFRARHPDLNLGSPKKVTSTRGVEAAIPPAIVFPKQKFKNDNMLKDDAGNLDQAVPSKNELFSQKMKHFTQHSNSCMKNSTMFDNHKSHLSIESFQMANSNRATSRLPFVKDEIEIENNTLQETFIKGIPKQQYENPISQIQQETAQNSLWDFEPSKETLITEKTSESQKYLRSLPAHSKTFSNESHGLNLNSIEQQNTKVEESLSWMRALIDVKAKGDGFAIFGSINRVNIVHNIKVERQLGERKHRKKKKNNNSGNNSNNNNTDNNAAHCVNRELFTCNCLNRTKYGAGIDIKNAAAGAAKVEQTFAAAFLTSIPATSPIRFWQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -