Dalb018261.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- bab1
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010000229.1:1215203-1221918[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-17 4.2e-14 53.0 0.0 1 43 101 144 101 146 0.95
Sequence Information
- Coding Sequence
- ATGCAACAAATTGCATTGCAATGTGATACATCCGGATCCGATGCATATCTCTTCACCCAAACCCTACCTTACTGCAAGAACGAACTTCGCAGTATAAATGTACAACAACGTGTAGCACAGTTGTCGCCATTGCCAGCGAAATTACTGGAGAACTCACATTCGTGGATGGGTGCCTCAACGACGTCTATTGCTGATAGCTATCAATATCAACTGCAATCAATGTGGCAAAAGTGTTGGAACACCAATCAAAATCTAATGCATCATTTGCGGTTTCGCGAACGAGGTCCATTAAAATCATGGCGACCTGAAACAATGGCTGAAGCCATTTTTAGTGTTTTAAAAGAGGGTCTATCTTTGTCGCAAGCTGCACGCAAATATGACATTCCATATCCAACATTCGTTTTGTACGCCAATAGAGTCCACAATATGCTAGGGCCATCTATAGATGGTGGCACAGATCTCCGACCAAAAGGTCGAGGGCGACCGCAACGAATACTTCTGGGCATTTGGCCAGACGAGCACATTAAAGGTGTAATCAAAACTGTGGTATTTCGTGATGCAAAGGAACTTAAGGACGAGGGTTTGCATTTGCATTATGGGCGCCATTCCCCTGTGTTTCCATTTCAAGACAACGCGCTCAACTATCCAGGAGCACCCGGATGTCCAAATGGTCTTCCAGCGGGTCCAGTTGGTCCTTCTGTAGCTGACTCAATGTCACAAGAAgccactgctgctgccgttgccggtgtggcgcatgcgttgcgtcaacaaatgcaaatggcagctgcagttcaacaacagcaacaacaacaacaacatcaacaccatccacatcaccaacaacaacatccacaccaacaaccatcacatcaacaccatcaccCGGAAACATCTTCCAATATTTTTAATCTACCCGCTCACATGTCGCCCCATGGCAGTGCCAGCGGGATTCCACTACCAAAGCAAAGCTCCCCCATTTCAAGTGGACCTGGGCAAAACCCAATGCAAAGGCACACTTCACCATCCGCGTCCAATATACCTGGTCTTCCTAATCTTAGCTTAGCCAGTATACCGGGTCTTCATATGGTTCCAGGCATAGGAGCGAGTATGAGCTCAACAGGAGGTGTCCCTTCGTCATCAACATCCTCTATGCACCGAGGAGAAGGACCTTCACAATCAAGCCACCAGTCCAATATCTCACCTGTCCACAATTTGTTCAGCAGTAGCAGTAGCTCGGTGCACAATCCCCAACATACGGTAGCTCCACCGTCCAGTAGTAGTAATCCGCGACTTCATCCGACCTCACCCTCGGACTCAGCGCATGATCTCCGGATGAACAGTCCTGACGAGAGTCTGCTCAACTCTCCTTTGCAAATGTCCCTTGAGCCAGCTGTCAATTTGGCAGTTGGTGTAAGTGGAATGGCCTACAAACCATCCCGAGGCTACTCCTCACCGCGTCCAGAACATCTTTTTCAAGAAGATATTGCAGAGCTTGTCGGTTCTGCCAGTGATAGATCCTCAGCATGTCCTTCGAACTTAAATAACTACAAGGATACACCGACAAACATTAAACTAGAACCCATCACAGAATGTCGGAGCGAATAA
- Protein Sequence
- MQQIALQCDTSGSDAYLFTQTLPYCKNELRSINVQQRVAQLSPLPAKLLENSHSWMGASTTSIADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKDEGLHLHYGRHSPVFPFQDNALNYPGAPGCPNGLPAGPVGPSVADSMSQEATAAAVAGVAHALRQQMQMAAAVQQQQQQQQHQHHPHHQQQHPHQQPSHQHHHPETSSNIFNLPAHMSPHGSASGIPLPKQSSPISSGPGQNPMQRHTSPSASNIPGLPNLSLASIPGLHMVPGIGASMSSTGGVPSSSTSSMHRGEGPSQSSHQSNISPVHNLFSSSSSSVHNPQHTVAPPSSSSNPRLHPTSPSDSAHDLRMNSPDESLLNSPLQMSLEPAVNLAVGVSGMAYKPSRGYSSPRPEHLFQEDIAELVGSASDRSSACPSNLNNYKDTPTNIKLEPITECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01044639;
- 90% Identity
- iTF_00334901;
- 80% Identity
- -