Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_946251825.1
Location
CAMIUB010000172.1:355633-358302[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-15 9.6e-12 45.4 0.0 1 44 11 55 11 56 0.92
2 2 1.5e-18 2.5e-15 56.9 0.0 1 43 482 525 482 527 0.95

Sequence Information

Coding Sequence
ATGGTGCCAATCACTGGACGTCGTACTTATACCGAGGAAGAACTAAATAATGCATTGCAAGATATTATAAGTGGGAAGTTAGGTACACGCCGAGCTGCCGTACAATACAACATTCCTCGATCTACTTTACGAAACAAAGTGTATAAAATATCCTCGGGGGCAAAGCGTGAGATACCTACCCCACTGCAATATAGGACAAGTCTTGAAGATTTAGCTGATATTGATTACGATAAACATGATGTGTCAGCTGATGAAGAAGAGAGCAATGGTGATAAGCTTCAAAATAGTTCTTTAATGCCACACACCAGTGATGATCTTGCCAGTCGTATTGCTGAAGTGAGTGTTCAAAATACCAACGTTGAACACAAATCTCTCACTCCTGAACAACCTCAATGTCAACCACACGATAATGGAGCCCAAAATAAGGCAACCACATCACAAGAGTCACAGCCAAAGCATAAAGCATCATCGCCACAACTTCCACAGCAACAATCGTCTCTGATAGGACAAAATGCATGGCAGAATGTTCTGCTGCATAGTTTGCTTCTTTCTGGTGGCCTTCCTATGCAACACAATTTTGAGGAAGCTCTACAGGTTTTTAATGCTTTGCTTTTAAAACAAGATCTAGGCCTACTTAATCCTCAACTTTTAACTCAACTTCATCAATCACAACAATCGACGCAACAACCACACCTTATAACCCAGGAACTGCAATCAAAATCAGCTGCGCTTGCACAGGTCACATCTTTTGAAAATTGTCTACCAAAGTCTGAAACACCGGAAAGTGATTCTTCAGTGGATTTTAATGAAGCGCTTGGTGATGATCCATCAGTTATTTTAAAAATTCCGTCCTACAAACCGGTAGCTGTGTCTTTTACTTCAACATCCTCAGCTACACTGGCATCTGGGTTATGTAATAACAAAAATATTGAAAATCTGCCGCCAAGCTCGCCAAAAAATTTAGCACCATCAATAGTGGGACCCGATATATCAACGCAACAGCTGCATCATAACCACCACCTGCATCCACATCATCATTCATCGGCATTATCATCAAACAATATTCCGGTGACATCACCTCCAATGAAATGTCACGTAAGCGGGGAGTCCCAATCTCCCCCAACGCTATCTCTGCGTGATGTCATCGCCAACAGTATAAGTAGAACATTCAATCAACAGACAAAAATTGATGCTTCAAATTCGAGTCCTGCTCATTCCACATCATCAGCAATGGATTATAGTGAACAGTACAAACGACCTAGCATATCAGTTATAAAAAATATCGGCGGAACCGATACTTCACGTTTTGCCACTGCCCCAAACTTGTTGGGCAGTCATCTCAACTCCAATCACCAACATCAACACCACAGTCAAAGTTTAACGAACAACAATTTGGCTGGTGGCAAGGGTACACGCCCAAAGCGGGGAAAGTACCGAAATTACGATCGTGATAGTCTTGTTGAAGCTGTCAAGGCAGTGCAACGTGGCGAAATGTCTGTTCATCGTGCTGGGAGCTACTATGGTGTACCCCACTCAACACTTGAGTACAAGGTCAAGGAGCGGCATTTGATGAGGCCTCGAAAAAGGGAACCAAAAATTCAACCACCGTTAGATGAACGGGGGGGAGAAACCAGCACAAGTGTCAACATAACTGGTTCAACGTTGAACACTCTAAGAACCTCAAATATTCAGAGCCTTTCTGCTGTAAACAATCAAGATAGCTACAATAAAAGCAGTAGTAATCCATGCACTAGTATCAACCAAACACATTCTATCACTGGCAAGAGCAACCCACCGTACCCCAAAACATCACCAAATGGTATAAAAATACCTCCGGCGTTGTTCGAGCAAAGTTTAGCAGCCCAACTGCAGTATTCACCGCACCTCTTCTGGCACGGAGGCTTTGGGTCTCTACAAATGGATTTTAATGCAAGATCCCAAGCGGCTGCAGCTGCGACCGTTGCTGTTGCAACAATGGCTGGCTCCGGAAATGCATCCTTTGCTTCTAATTCTGAATTACTTAAATCTCAAATGATGCAAAGATTAAATGAAGACCACGGACCTTCTAATGCAATGGGAAGTCCACCTCTGCAACCAATCCTGAGTAATTCAAGCAGTACTACTAATAACAAGAGTGTAAAAGACATCGCTGAGAACCTATATGAACCAGGAGGCGGTGCAAACGGTTCCTTTTTAGACGGAATCATCCGCAAAACCTTGGACCGCAAAAGTTCCGAATCAAAGCAAAGCAATTTAATAGATGAATTAGTTCAGCATAAAAATAAACCTCCTTTGCAAATTATTCTAAACAATGAGCGTATGGCAGCAGACTTGCAAAATATGAAGCGTTCCGGGAGCTCCATAAAGTATCGTCATTCAAAAGTGATTAAACGGGAGCGATGCAGTCCAACATCAGATCTTTCAAATTCTGATTCGGAGAAAACTAATCAACGACCACCTTCCATACCAGACATTTTCGTGACTGGAATGGAGCATAATTTAATAAGCGAGAATAGTGATTTAAAAAAGGCTCAACATGGGATTTCTTTTATGTCAAGCAGCCACTTGCCGGTGGAAACTGGATCGACGTTTTCAAAGACGGTACTAAACATTAGTAACCAGCATTCCAAATTGGAACATATCAAGTCCGAAACAGAAGATAGTTTATAG
Protein Sequence
MVPITGRRTYTEEELNNALQDIISGKLGTRRAAVQYNIPRSTLRNKVYKISSGAKREIPTPLQYRTSLEDLADIDYDKHDVSADEEESNGDKLQNSSLMPHTSDDLASRIAEVSVQNTNVEHKSLTPEQPQCQPHDNGAQNKATTSQESQPKHKASSPQLPQQQSSLIGQNAWQNVLLHSLLLSGGLPMQHNFEEALQVFNALLLKQDLGLLNPQLLTQLHQSQQSTQQPHLITQELQSKSAALAQVTSFENCLPKSETPESDSSVDFNEALGDDPSVILKIPSYKPVAVSFTSTSSATLASGLCNNKNIENLPPSSPKNLAPSIVGPDISTQQLHHNHHLHPHHHSSALSSNNIPVTSPPMKCHVSGESQSPPTLSLRDVIANSISRTFNQQTKIDASNSSPAHSTSSAMDYSEQYKRPSISVIKNIGGTDTSRFATAPNLLGSHLNSNHQHQHHSQSLTNNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKIQPPLDERGGETSTSVNITGSTLNTLRTSNIQSLSAVNNQDSYNKSSSNPCTSINQTHSITGKSNPPYPKTSPNGIKIPPALFEQSLAAQLQYSPHLFWHGGFGSLQMDFNARSQAAAAATVAVATMAGSGNASFASNSELLKSQMMQRLNEDHGPSNAMGSPPLQPILSNSSSTTNNKSVKDIAENLYEPGGGANGSFLDGIIRKTLDRKSSESKQSNLIDELVQHKNKPPLQIILNNERMAADLQNMKRSGSSIKYRHSKVIKRERCSPTSDLSNSDSEKTNQRPPSIPDIFVTGMEHNLISENSDLKKAQHGISFMSSSHLPVETGSTFSKTVLNISNQHSKLEHIKSETEDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00427042; iTF_00334896;
90% Identity
-
80% Identity
-