Basic Information

Gene Symbol
-
Assembly
GCA_963555695.1
Location
OY743154.1:661361-662818[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.18 1.2e+03 0.9 0.1 15 25 41 51 37 51 0.87
2 23 0.082 5.5e+02 2.0 0.0 14 25 56 67 56 67 0.91
3 23 0.18 1.2e+03 0.9 0.0 15 25 73 83 71 83 0.88
4 23 0.18 1.2e+03 0.9 0.0 15 25 89 99 87 99 0.88
5 23 0.082 5.5e+02 2.0 0.0 14 25 104 115 104 115 0.91
6 23 0.18 1.2e+03 0.9 0.0 15 25 121 131 119 131 0.88
7 23 0.18 1.2e+03 0.9 0.0 15 25 137 147 135 147 0.88
8 23 0.18 1.2e+03 0.9 0.0 15 25 153 163 151 163 0.88
9 23 0.18 1.2e+03 0.9 0.0 15 25 169 179 167 179 0.88
10 23 0.082 5.5e+02 2.0 0.0 14 25 184 195 184 195 0.91
11 23 0.082 5.5e+02 2.0 0.0 14 25 200 211 200 211 0.91
12 23 0.18 1.2e+03 0.9 0.0 15 25 217 227 215 227 0.88
13 23 0.18 1.2e+03 0.9 0.0 15 25 233 243 231 243 0.88
14 23 0.18 1.2e+03 0.9 0.0 15 25 249 259 247 259 0.88
15 23 0.18 1.2e+03 0.9 0.0 15 25 265 275 263 275 0.88
16 23 0.18 1.2e+03 0.9 0.0 15 25 281 291 279 291 0.88
17 23 0.082 5.5e+02 2.0 0.0 14 25 296 307 296 307 0.91
18 23 0.18 1.2e+03 0.9 0.0 15 25 313 323 311 323 0.88
19 23 0.18 1.2e+03 0.9 0.0 15 25 329 339 327 339 0.88
20 23 0.18 1.2e+03 0.9 0.0 15 25 345 355 343 355 0.88
21 23 0.082 5.5e+02 2.0 0.0 14 25 360 371 360 371 0.91
22 23 0.18 1.2e+03 0.9 0.0 15 25 377 387 375 387 0.88
23 23 0.082 5.5e+02 2.0 0.0 14 25 392 403 392 403 0.91

Sequence Information

Coding Sequence
ATGCAAAACGaaattttcaaatccgactggtatTTCCAGAGAGTACTGATTCTTCGCGTCCTGACATTGTTTGTTATATACAAAGTGGCGCGGCACTGTACGGCCTCGGGACGTCACTGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCGGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGCCGCACGGCCACGTGAGGCTGTGCTCAGCGACAGTCGCGGGCCGCGCGcgtcaatattttcaaaaattaacaataaatacataa
Protein Sequence
MQNEIFKSDWYFQRVLILRVLTLFVIYKVARHCTASGRHCAPHGHVRLCSATVAGRAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGRAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGRAPHGHVRLCSATVAGRAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGRAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGGAPHGHVRLCSATVAGRAPHGHVRLCSATVAGGAPHGHVRLCSATVAGRAPHGHVRLCSATVAGRARQYFQKLTINT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-