Basic Information

Gene Symbol
pnr
Assembly
GCA_963555695.1
Location
OY743144.1:854500-861909[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-18 3.3e-14 53.9 3.8 1 35 18 51 18 52 0.97
2 2 2.9e-18 2e-14 54.6 6.0 1 34 72 104 72 106 0.98

Sequence Information

Coding Sequence
ATGAGCGTGCGAACAGATGGCGTGCTGGAGATGTACGAGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACGCCACGGGCCACTACCTGTGCAACGCATGCGGCCTCTACCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGTCGGCTGCGCGGCGCCACGGGCAGTGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGGATCAACCGGCCCCTAGCAATGAGGAAGGACGGCATCCAGACGCGGAAACGCAAGCCAAAGAAATCTGGTAACGGAGCGAAGCCGCCACAAGACGCCAACAAGAAAGATGAGCACAGCTCTCCAGGGATGGATGACAGCAAACACAGTCTCCCAGAGGTGCCACTACCGCTGACGCAGTCAATGTCTAGTCACGGAGCGTCAAAGAGCCGTGAGGCGCACGTGACGCCGGACACGTCGCCGCACGCGCACGCGCACGCGCTCGGCCACGCGCCGGCGCAGCAGCACGCGCACGCGCAGGCCGGACACCACGCGCACGCGCAGTACCCGCTGGGCCTGCCCGGCGCGCCCTTCCTGTCCAACCCGTCGCTGTTCAACATCAAGAGCGAGCCCAGCAACGCCGCCGGCTACGACTCGTACCCGCCGCACTCCACGCCGCACTACCACTCGCAGCAACACTATCTACACGCCTTACAGTACGGACTTGGCAACGGCGAGGAGGAGGAGGGCAGCGGCTTCCTGCACCAGCGCAACGTCACGGCGCACGCCAAGCTCATGGCGTCCACGTAG
Protein Sequence
MSVRTDGVLEMYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGAKPPQDANKKDEHSSPGMDDSKHSLPEVPLPLTQSMSSHGASKSREAHVTPDTSPHAHAHALGHAPAQQHAHAQAGHHAHAQYPLGLPGAPFLSNPSLFNIKSEPSNAAGYDSYPPHSTPHYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00831787;
90% Identity
iTF_01527932;
80% Identity
-