Dtem054285.1
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743166.1:8532514-8541416[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.12 19 7.7 1.0 1 23 85 108 85 108 0.94 2 14 1.5 2.4e+02 4.2 2.6 2 23 181 204 180 204 0.88 3 14 0.0017 0.26 13.5 0.4 1 23 208 230 208 230 0.96 4 14 1.5 2.3e+02 4.2 3.0 1 23 235 258 235 258 0.94 5 14 0.0085 1.3 11.2 1.4 1 23 333 356 333 356 0.94 6 14 0.18 28 7.1 0.4 2 23 383 405 382 405 0.95 7 14 0.0029 0.47 12.7 2.2 3 23 429 449 427 449 0.96 8 14 0.00054 0.086 15.0 0.1 1 23 453 475 453 475 0.97 9 14 0.012 1.8 10.8 0.5 1 23 480 503 480 503 0.96 10 14 0.0029 0.46 12.7 3.9 1 23 510 533 510 533 0.97 11 14 0.00049 0.077 15.1 0.9 2 23 541 563 540 563 0.95 12 14 0.00025 0.04 16.1 2.0 1 23 569 591 569 591 0.97 13 14 3.5e-05 0.0055 18.8 1.9 1 23 597 619 597 619 0.99 14 14 6.5e-07 0.0001 24.2 2.8 1 23 625 648 625 648 0.98
Sequence Information
- Coding Sequence
- ATGGTAAAGAACTTGACCAATAACTTAACCATTTTCTTTATAGATAAACAAGAAAAAGTGACTACAGCTACGAAAATCAAAATAGAGCTGAAAGCTATGGAAACTGTACCTAAGGAAGAGCACATAAAACATAATCCAGAGACAGGGCCTCGACCACGCATAAAGCGGCTACTGCACAAGCATCTACACAATCTGAAAATAATCCTAGAATCTACTAACGCCACGATGATACTCAAACATGGAGATAAGGGATATTTGTGCTGCTTTTGCACCGAAGCTTTCCAAGAAGCCATGAATTTGAAAGTACACACTTTATCGGAACATCAAAATGCGGATAAGTTCTATGGCAACATTAAAGCCAGAGGACCATCTAGGTTCTTAGTCAAACTTGACATCACGAACCTAAAATGTATGCTTTGCAGCGCTAATATAGACTCTCTTGAAGATGTGTTCGCCCATCTAACAAAGACACACAATAAGAACTTCCACACTGATatacaaaatcaaatatttccttTCAAGTTCAATGCCAAGGAACTGAAATGCTACCAATGTAGTACTGACGTAGTTTTCGCCACGTTCAGCGCTTTACACGAGCATATGCACAAGCACTACCGATACTTCGTTTGTAATGAGTGTGATGCTGGATTCATCAATCATATATCATTATCCAGACATAGCGTTACTCACACGAAAGGAAACTTCGTCTGCCGACATTGTCCCTTTGAATTCGACAACGTGTTCAAGAGAAGAAACCACGAGATGCGCAGCCATACTCtcactggcaaattaaataaatgccaTTTCTGTAATGAAGGTGGTCAACAAAGAACTGTTGTGGAAAAAGAAACAAACGGCAAAGAACTTACGGAAAATCAAGgtaaaaaagaagtaaaaataaCTCCAAGAACAGAATTGGTGAAACATCGAAGGAACATTAAAGAAGTTCTACTTAATTCTAACGCAACGCCTGTAAGACGGTACGGAGGGATCGGATACACGTGCTGCTACTGTCCAGACCAGTTCGAAAACCCTGTAGATCTTAAGAAACATACTCTAGAGAACCACGGAAATATCTCGGAAGCAAGCTTTATGAATAACATGAACATGTCCGAATATATCGTCAAGTTAGACATAACTGCACTGAAATGCAAGCTTTGCGACAGTAATATGAATACTCTAGATAACTTAATAGACCATCTTCAAAATACACATGAGAAAAAAATTGACAAGGACCATATAAACCATATCTTTCCTTTCAAATTCGGCAACGATTTACTGGCATGCACTATTTGCTCGAACACTTTTAGTAAGTTTAGGACCCTTGTTAGACATATGCATATTCATTACAGGAATTACATTTGCACCGTTTGCGAAACCGGATTCGCGAACCGAAACTCATTagcacaacatttaataaatcacaaaaCAGGGGCTTTTGCCTGTGACTACTGTCCAAAATTCTACCCTACTCTAGTTAAAAAACGAATGCACGAAAGAACCGCCCACACGCATGTCCTTGCTTCTTATAAATGTGGTTATTGTAAGGAAACTTTTAAACATCATGGACAAAAGGAAGCTCATGTAACTACTGTACACGGTGTGGTATCATTGAAAACTGTATGTCAAGCTTGCAACAAAGTATTTCCCAGTAGGAAGAAACTTACCACCCACGTTAAAAGAGACCATCTAATGGAGAGGCCACACAAATGTACGGAGTGTGATATGGCGTTTTATTCCACGACAGGGCTAAAAAGTCATATGGTCAAGCATACAGGGTTGAAAGAATTTCAGTGCTCGGTATGTCTGAAGAAATATGGAAGGAAGAAGACGCTGAATGTTCATATGCAGACACATTCTAAGGAGAAGAGGTTCAAATGTGAAAAGTGTGGGCAGAAATTTACGCAGAAAAGCACTTGGAGGGTTCATATGAGATCCAAACATGAAGAAATagtttaa
- Protein Sequence
- MVKNLTNNLTIFFIDKQEKVTTATKIKIELKAMETVPKEEHIKHNPETGPRPRIKRLLHKHLHNLKIILESTNATMILKHGDKGYLCCFCTEAFQEAMNLKVHTLSEHQNADKFYGNIKARGPSRFLVKLDITNLKCMLCSANIDSLEDVFAHLTKTHNKNFHTDIQNQIFPFKFNAKELKCYQCSTDVVFATFSALHEHMHKHYRYFVCNECDAGFINHISLSRHSVTHTKGNFVCRHCPFEFDNVFKRRNHEMRSHTLTGKLNKCHFCNEGGQQRTVVEKETNGKELTENQGKKEVKITPRTELVKHRRNIKEVLLNSNATPVRRYGGIGYTCCYCPDQFENPVDLKKHTLENHGNISEASFMNNMNMSEYIVKLDITALKCKLCDSNMNTLDNLIDHLQNTHEKKIDKDHINHIFPFKFGNDLLACTICSNTFSKFRTLVRHMHIHYRNYICTVCETGFANRNSLAQHLINHKTGAFACDYCPKFYPTLVKKRMHERTAHTHVLASYKCGYCKETFKHHGQKEAHVTTVHGVVSLKTVCQACNKVFPSRKKLTTHVKRDHLMERPHKCTECDMAFYSTTGLKSHMVKHTGLKEFQCSVCLKKYGRKKTLNVHMQTHSKEKRFKCEKCGQKFTQKSTWRVHMRSKHEEIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00906437;
- 90% Identity
- -
- 80% Identity
- -