Dtem054372.1
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743166.1:9911414-9934049[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.091 14 8.0 3.9 1 22 409 429 409 430 0.90 2 15 6.8 1.1e+03 2.1 0.5 2 23 456 478 455 478 0.90 3 15 0.15 23 7.4 0.7 2 23 501 522 500 522 0.96 4 15 4e-05 0.0063 18.6 1.2 1 23 526 548 526 548 0.97 5 15 0.011 1.7 10.9 0.4 1 23 553 576 553 576 0.90 6 15 0.0094 1.5 11.1 0.5 2 23 584 606 584 606 0.94 7 15 0.0016 0.25 13.6 0.4 2 23 614 636 613 636 0.95 8 15 0.00022 0.035 16.2 0.2 2 23 643 664 642 664 0.95 9 15 4.9e-05 0.0077 18.3 0.3 1 23 670 692 670 692 0.98 10 15 0.032 5.1 9.4 1.1 1 23 703 726 703 726 0.90 11 15 0.019 3 10.2 0.0 2 23 733 755 733 755 0.94 12 15 4.7e-05 0.0075 18.3 2.6 1 23 762 785 762 785 0.95 13 15 0.0033 0.53 12.5 3.3 1 23 791 813 791 813 0.98 14 15 4.1e-06 0.00065 21.7 0.6 1 23 819 841 819 841 0.98 15 15 0.0082 1.3 11.3 4.4 3 23 849 870 848 870 0.97
Sequence Information
- Coding Sequence
- ATGTCGGTGGAAAAAGCTGAGATAGAGACGTTTTTCGGTAAATGTAGGTGTTGTCTCTCCTATGGCTACTTAAAAAACATGTGGGCAGAACATCAATTTGAAGGAGAAGCAGAAATCTACGGCGAGATGCTTGTCCAATGTTTTGCACTGACTTGGGATTATTCGGAGGACTCGATGGAACATGATCAGATTTGCGAGCAGTGCGTCTGTCGGTTGCGAGATGCTAGTGACTTTAAGAGGGTGGTCTTGGACTCACAAGCGGAGCTCTTCCTGCAGATAGATGCCGAAAATGAGCTTAGCATCAAAGAAGAAAGACTAGATGAGGATTTCCTCATAGAGTACCAACATCCTGACAGCGAAAACAATGCAGACACCATGGACCCTGAGACAGAATACACTACGGACATTGCTGACACTATCACAAGTGCCAAAGATGAGACAGAGTATGAGGAAGTTGAGTATTTAGAAGAAGAAGATGCTGTTGGAGTGACTGATGCTGTTGATACTGACTCCTCACAACCAACAGATAAGTCAGAACCAGTAAAACGTCGCAAGCAACCTTGCAAACAAGACACAGATGACGAGGAAGCGCCGAAACGGAAATGGCCTAGAAAGCTGCCCAAATCAGAACGGCACAAGACTTACAAACAATACTCCGAGATTGATCTACGCAAATGTTTGGATGAAGTCAGGAACAATAAACTGACGGCTGCTGAAGCGGCTTTGAAGTATGATATACCGAAGAAGACTATTTCTGCCAAGATAAAATTGGATCCTAATGATGTCCGGACAGACATCCAGAACTCTATAAACAACACAACTACCCGCAAAACTGTGACAACGACTCAAATAGAGGTACCCACACTATCACATGAAGAGACAATTCAAACGGACACAGATACAGAAAGCCAAGAGGTACCAAACAAGTACCCACTATCACACAATGAGGCAAAAGTGACGGACTCGGACACAGAAAGCCAGGAAGTGCCAAACAAGTACCAACTATCATACGAAAAGGCAAAAGATACAGACTCAGAGGCAGAAAGCCAGGAAGTACCAAACAATTACCCATTATCACGTGAAGAGTCAAAAGAGTCAGACTCGGACACAGAAAACCAAGAAGAAGTACCAAACAAGTTCCAAATGTTTAAACACAAGAACAACCTCAAAATGATCCTTAAATACTCAAACGCAACATTAATCAAAGGAAACTCAGCCGCTGGATACTCCTGCTGGTTTTGCGACAAACATTTTAGtcctgaaaaattaaaaaagcacaATTTTGAACACGGAGACGTGTACGATGAtgccatcaaagtaaaatacgtttcggatttaataataaaacttgaTGTTACTGGACTTAAATGCAGGCTATGTGAAGAAGAAATCAACAGTCTCGAACACCTGATGGGCCATTTCCAAGAAAATCATAACAAAACAATCTATACGGACATAGACAACCATTTAATACCTTTTAAATTTGACACCGACGAGTTACAATGCGTAATTTGTGCAGCAGAGTTCAAATATTTCAAACTACTCTCAGAACATATGTGCGAACATTACAGTAACTATAATTGCCCGGAATGCGACCgtgtgtttataaataaacaatcaatgCAAACACATAGATACAGACATAAGAAAGGAGAATACAAATGTTCACAATGTCCGAAAATATTCGACAGTCCCATGAAAATACGTGAACATGAATACGTAACTCACAAACTATCGAATAAGAAGAGAAAGTGTGGCTTCTGTGACGAGAAATTTTCTTCAGCAGACTTAGTAAAGAATCACGAAGCTAGAAAACATGGCGTCGTCCGTTGCCAGCTAACCTGTGAAGCTTGCAACAGGCCTTTCGCTACCCAGAAAAGTCTTGCAATACATAAGAAAAGATACCATCTTTTAATGCGTCCTTTGGAATGTGAAACTTGTGGGAAAGGGTTTTACACGAGACAGGAACTCAACTGGCATTCAGTCACCCATACAAAGACCAAAGAATTTCAATGTAATCAATGTGATAACTCGTTTGGCACAAAACCCGCGCTAAATCAGCATTTAAGGGCACATAGAGGCATAAGAAGACATAATAGTGGGATTTTCAAATGCTCTTATTGCTCCAAAGAGTTTGATTCTCGACCGAAACGGTCCGACCATGAAAGAGCTGTGCATATGGCCGGCAAGTATAGGAAATGTGCGTACTGTGACCTACGATTCCCGACATGGGATGCCGTACTTGACCACGAGCTTAAGGCACATGGGGTGGCGAAACCCACACACGCATGCGAAGACTGTGGAAAGACTTTTACAAAACAAAGTGTGTTAACAATGCATAAAAATCGCTTCCATCTGTTTAAGAAACCGCACAAATGTTCGTCTTGCGAGATGGCTTTCTGCACGAAAGTAGAGTTGAGCTATCATATCATAACTCATACGAAAACAAGGAATCACAGCTGTGAGATTTGTAAGAAGGCGTTCGGTACGCCGATCACTTTGGCTCAGCATATGCGGACTCATACGGATGTTAAAAAACTTCTTTGCGATTACTGTGACCGCCGGTTCTTACACAGAACTACTTTTAGAAGGCATATGAGAGAGACGCATGGagaaattgtttaa
- Protein Sequence
- MSVEKAEIETFFGKCRCCLSYGYLKNMWAEHQFEGEAEIYGEMLVQCFALTWDYSEDSMEHDQICEQCVCRLRDASDFKRVVLDSQAELFLQIDAENELSIKEERLDEDFLIEYQHPDSENNADTMDPETEYTTDIADTITSAKDETEYEEVEYLEEEDAVGVTDAVDTDSSQPTDKSEPVKRRKQPCKQDTDDEEAPKRKWPRKLPKSERHKTYKQYSEIDLRKCLDEVRNNKLTAAEAALKYDIPKKTISAKIKLDPNDVRTDIQNSINNTTTRKTVTTTQIEVPTLSHEETIQTDTDTESQEVPNKYPLSHNEAKVTDSDTESQEVPNKYQLSYEKAKDTDSEAESQEVPNNYPLSREESKESDSDTENQEEVPNKFQMFKHKNNLKMILKYSNATLIKGNSAAGYSCWFCDKHFSPEKLKKHNFEHGDVYDDAIKVKYVSDLIIKLDVTGLKCRLCEEEINSLEHLMGHFQENHNKTIYTDIDNHLIPFKFDTDELQCVICAAEFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHRYRHKKGEYKCSQCPKIFDSPMKIREHEYVTHKLSNKKRKCGFCDEKFSSADLVKNHEARKHGVVRCQLTCEACNRPFATQKSLAIHKKRYHLLMRPLECETCGKGFYTRQELNWHSVTHTKTKEFQCNQCDNSFGTKPALNQHLRAHRGIRRHNSGIFKCSYCSKEFDSRPKRSDHERAVHMAGKYRKCAYCDLRFPTWDAVLDHELKAHGVAKPTHACEDCGKTFTKQSVLTMHKNRFHLFKKPHKCSSCEMAFCTKVELSYHIITHTKTRNHSCEICKKAFGTPITLAQHMRTHTDVKKLLCDYCDRRFLHRTTFRRHMRETHGEIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00121704; iTF_01093530; iTF_01095329;
- 90% Identity
- -
- 80% Identity
- -