Dtem007883.1
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743139.1:4208470-4217971[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00053 0.083 15.0 1.1 1 23 268 290 268 290 0.98 2 12 0.0017 0.27 13.5 1.3 2 23 298 319 297 319 0.94 3 12 0.84 1.3e+02 5.0 0.3 1 23 323 345 323 345 0.94 4 12 0.00058 0.092 14.9 1.0 1 23 350 373 350 373 0.98 5 12 0.0059 0.93 11.7 0.2 1 23 377 400 377 400 0.94 6 12 0.0093 1.5 11.1 0.3 3 20 413 430 412 436 0.93 7 12 0.00098 0.15 14.2 1.8 3 23 446 467 446 467 0.98 8 12 0.2 32 6.9 0.7 2 23 487 509 487 509 0.97 9 12 7.5e-05 0.012 17.7 0.9 1 23 520 542 520 542 0.97 10 12 2.5e-06 0.00039 22.4 2.0 1 23 548 570 548 570 0.99 11 12 2.1e-05 0.0033 19.4 0.6 1 23 576 598 576 598 0.98 12 12 1.2e-05 0.0019 20.2 0.4 1 23 604 627 604 627 0.98
Sequence Information
- Coding Sequence
- ATGAAGGTGTGTCGTATTTGTTCAACGATGGACGTGAAATTACACGACCTACGATCATACCCATTAGAATCTTACTATGAGTCTGTAATAGGAACAAATCCCCAGTACACCAACCTGCCACCATATGCCTGCTATGAGTGTGCAGCACTTGTAAGGAAGTTTTATTTCTTCAGACAGAAATGTCTACGAAGCCAGGCAGTACTCCATGGTGTTACAGATGCCTTTGGCAagGTAAAACCTAAAGATGTGAAATTAATAGACAGACAAGGTCTCCACATCGCCTCTAACCTCCAAATAACCATTTTGCCGAAAATAGAGATATTAAAGACCCATAAACCtcaaataaacaaagaaataaaacttGAACCAGGTAGTGAGGATGATGACGATAAGTTTAAAATTGAAGATCATAACTATGCTTCCTTTAACTCAATGGATCCCTGTATATccagtgatgatgatgaacctCTATCACTTCATAAGGAGAAGAAAAGTCAAATTAAGGGTACAGATGATGAGAAGGTGGACTTGAAAGAGGAGTTTGAAGGTCTTCAATTTGCTGTAGGCACAGAAGACTCTAGACATTCAATTGAAGTTCCTAAAGTGGTTGCAAGGAAAAAGAAACGTGGGCTGAAAAAAGAAACTTTAAAGCATAAAAAAGAGTTGTTAAATCCAAGCTTGGCTAGTGATGGCAAATGGAATGATTTTGCACAGTACATCAATGTTATAACTTTGACGTTGGAAGAGCAGAAAGAAGAGATACAGAAGCGGAAGGAGTCAACCAACTACTTGAACTCTCCCTTCCAGTGTAATCTGTGCTATAAAGGGTTCATAGATAATGATGCCTGGAATCATCATGTTAGCAAACATGCTGTGAGTGCAGGTAGTATAGAGTGTGAAGTCTGTaagtttaggtttaaaacaaagCGCGCCTATCAGAAACATGCGTCCAACCACGAGAAGAAATACGCCTGTAAATCCTGTCCATACATATCTACTAACACGACTCAAGCTAAGCAGCATCAAGGATGGCATAAAGGAATTACTTTCAAATGCAAATTTTGCGATGAAATATTTACAATATGGACGTCTTACATGAGCCATGTGCGTATCAAACACCCGTCTGAGTTCATATGTGGCTTCTGCGGGTACTCTTTCATCAGCAAGTTGGGCCTCGCCATGCACAAAACTATGATGCACAAGGATGTCCAAGAGAAAGCAGAAGAAGGTCCGTTCTGCGAAGAGTGTGACGTCAAATTCATATCGACAGAGGCGTATAAGAGACACATGGTCATGTCCACTAAGCACACCCAGACTACAGACTCTATTAAAGGCTGTCGGACTTGTGGCGCGACGTTCGAGAATTCCGAAGAGTTAAGACTGCATCATCGTAAGGAACACACGCGTAAAAGACCCAAGAACTACGGGAAGAAACGTTCTAACCTCAGTTGGCCTGCCAAATGCGAACACTGTACAGAAGAGATTCCGAACGCTCGCGAGTATTGGACACATTTCCGTCGAGCCCATCCCGACAAGAAGTACCCCATACAGAAGAACCACATATGTGATATATGTGGTAAGGGTTTCCGGGGTAACGCCTTCCTGATATACCACAAACGCACGCACTTCGAAGAACGTGCGTACAAATGTTCGCAGTGCGACAAAGCATTTTTCAATCGAACCAACTTAAATGTTCATGAGAAAACGCACTCAGACAACAGGCCTTATCCTTGCTCTGTTTGCTTTAAAGCTTTCAAGGGTAAAGGAGCCCTCAACAGGCATTTTAGAAGCCACACGGGTCAAAAGCCTTACGAATGCGAAGTATGCGGCAAAGGGTTCTCTCAATCAAATAGTAGGAAACTTCACGTTCGTACGGTCCATCTGAAGCAACCCGCGCCTTACGTCAGTCGCAACCGTCTTGAGAGACGAAAACAAGGGCCTAAGGAAACGCCGGCACAGCAGTTTATATATTGA
- Protein Sequence
- MKVCRICSTMDVKLHDLRSYPLESYYESVIGTNPQYTNLPPYACYECAALVRKFYFFRQKCLRSQAVLHGVTDAFGKVKPKDVKLIDRQGLHIASNLQITILPKIEILKTHKPQINKEIKLEPGSEDDDDKFKIEDHNYASFNSMDPCISSDDDEPLSLHKEKKSQIKGTDDEKVDLKEEFEGLQFAVGTEDSRHSIEVPKVVARKKKRGLKKETLKHKKELLNPSLASDGKWNDFAQYINVITLTLEEQKEEIQKRKESTNYLNSPFQCNLCYKGFIDNDAWNHHVSKHAVSAGSIECEVCKFRFKTKRAYQKHASNHEKKYACKSCPYISTNTTQAKQHQGWHKGITFKCKFCDEIFTIWTSYMSHVRIKHPSEFICGFCGYSFISKLGLAMHKTMMHKDVQEKAEEGPFCEECDVKFISTEAYKRHMVMSTKHTQTTDSIKGCRTCGATFENSEELRLHHRKEHTRKRPKNYGKKRSNLSWPAKCEHCTEEIPNAREYWTHFRRAHPDKKYPIQKNHICDICGKGFRGNAFLIYHKRTHFEERAYKCSQCDKAFFNRTNLNVHEKTHSDNRPYPCSVCFKAFKGKGALNRHFRSHTGQKPYECEVCGKGFSQSNSRKLHVRTVHLKQPAPYVSRNRLERRKQGPKETPAQQFIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00121701;
- 90% Identity
- iTF_00071741;
- 80% Identity
- -