Dtem054371.1
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743166.1:9901580-9909689[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 3.9 6.2e+02 2.9 0.1 1 21 85 105 85 108 0.84 2 24 0.69 1.1e+02 5.2 0.6 2 23 134 156 133 156 0.95 3 24 0.023 3.7 9.9 3.9 2 23 179 200 178 200 0.96 4 24 0.0019 0.3 13.3 0.9 1 23 204 226 204 226 0.96 5 24 0.0022 0.35 13.1 1.3 1 23 231 254 231 254 0.96 6 24 0.043 6.9 9.0 0.5 2 23 262 284 262 284 0.91 7 24 7.8 1.2e+03 1.9 0.5 1 13 291 303 291 305 0.85 8 24 0.63 1e+02 5.4 0.8 1 23 380 403 380 403 0.92 9 24 0.14 22 7.5 0.0 2 23 429 451 428 451 0.96 10 24 0.0032 0.51 12.6 1.6 2 23 474 495 473 495 0.96 11 24 0.00014 0.022 16.9 1.7 1 23 499 521 499 521 0.98 12 24 0.0015 0.24 13.6 0.3 1 23 526 549 526 549 0.94 13 24 1.9 3e+02 3.9 0.3 2 19 557 574 557 579 0.76 14 24 4.7e-05 0.0074 18.4 4.5 1 23 586 609 586 609 0.96 15 24 5.7e-05 0.009 18.1 3.1 1 23 615 637 615 637 0.97 16 24 4e-05 0.0063 18.6 0.7 1 23 643 665 643 665 0.99 17 24 0.069 11 8.4 0.3 1 23 703 729 703 729 0.88 18 24 0.024 3.7 9.8 0.4 2 23 801 822 800 822 0.96 19 24 0.26 41 6.6 0.2 1 23 826 848 826 848 0.96 20 24 0.79 1.2e+02 5.1 1.0 3 23 855 876 853 876 0.88 21 24 4.3 6.8e+02 2.7 3.0 1 14 882 895 882 905 0.81 22 24 0.056 8.8 8.7 1.3 2 23 913 935 912 935 0.96 23 24 1.7e-05 0.0026 19.8 1.5 1 23 941 963 941 963 0.98 24 24 0.00058 0.092 14.9 3.0 1 23 969 991 969 991 0.97
Sequence Information
- Coding Sequence
- ATGAACATTACCGAAACGAAAACAATCGCCATAGAGATTAATATGGAGCCTAAGATAGAAGAGATGGAAGTTCCTGTGAACGCCGATCAAGTCCGAACGCGATACAAAGCTCTAGTCAACGACAAATTcaagaaagaaaacaaagagCCCGAGAAATTAGAAGTCAACGAAATGAATAAACAAAAAGACAACATAAAGATCATATTACACAATTCCAACGCGACAATCATCAAAGGATTTTGGGGAACTGGTTATTCTTGTAATTTTTGCGACGAACAGAGAGAAATACCTGCAGAATTAAAGATGCATAATTTAGAAGCTCATAACAATTTAGGGGACGAAGCTATCAAAGTGAAATATGTATCAGATTTAGTTATAAGACTAGACATTACTAATCTCAAATGCAAACTTTGCAACGACAGTATAAATACTTTAGAAGACTTCACGGCACATCTAACTAAAACACATTCGAAACGCATACATACAGATATCAAAAACCACATAATTCCTTTCAAATTTAACACAGATAACTTACAATGCTGTATGTGTAAGAAAGAATTTAAGTATTTCAAGCTACTTTCAGAGCACATGAGCGAACATTATAGGAACTACGAATGTTCAGTGTGTGAGCGTGCGTTCATAAACAAGCAATCAATGCAAACTCACAGTTACAGACACAACAAAGGTGTCTTCAAATGCTCACACTGCCCAAAAGTTTTCGACTCTAGGCCGAAAAGAAGCGTACACGAGAGAGTAGTTCACGCTCTATCGAATAAGACGCGAAAATGTTCTTTCTGCAGCGAAAGATTCGCGACAAAAGACTTGGTCCAAAGCCATGAGGTCAAAGCCCATGGTGTTAAACCAACAGTTTTTTCCTGCCAAGCTTGCAACAAGTCTTACCATAGCCAGAATGCCCATGGGAATAAAAAGGCAACAAAGACTGAACATGACAAAGCTAAGAGCAATGTACAGACAAACAAAGCGCAGGGGAATAAAAACACTACACAGGCTGAAGATGAAAAATATATGAGCAGCATACAGAAAAATAAGAACCTACTAGCCAATTTCAAAGAAACAGTACGTTCCGTACTTAGATGCACGAATGCTACGCCAGTCCGAGGTTACTGGGGCATCGGATATGCTTGCATCTACTGCAAATATCAAACCCGTGAAATTTCAGCACTTAAAAAGCACACTCTAACAACACATTCCGAAAATGTTGACGAACTTGACAACGTGAAATATTTACCAGACATGATCATTAAACTAGACATCACAGACCTCAAATGTGAGATATGTGATCTTAAAATAGAAACCCTTGAAGAAATCATGAACCATATAAAAGTTATTCACAGACAACCCATACATTTCGAAACTACCAATCATATCATTCCATTTAAATTCGGAAACAAGGATTTATCATGTGCTCTTTGTCCTAAACAGTTTAATTATTTCAAGCATTTATCTGAACATATGAATGAGCACTTCCCAAACTATACGTGTGAGCAATGTAATCGTTTTTTCATCAACCTGCGCTCTTTACGAACTCACGTGCTGAGACATCAAACAGGCACGTTCGTCTGCGCGTATTGCTCCAAAATCTTCGACACCAGAAGCAAAATGATGGCACACGAAAGTGTCTTACACCTAAAAGGATCTAAAAATCGTAAATGTGGGTATTGTGACGAGAGGTTCATGGATGCTGTAAGGAAGACGGAACATGAGGTGAAGGAACATGGCGCTCCAGTTCGCACATTCCCTTGCAAGGAATGCGGAAAGTGTTTTGACAGTCAACGTTCTGTAAAGAATCATATGAACCATCTTCATTTGCAGCTAAGACCGCACAAGTGCCCGGAATGTGACAAGGGGttctataataaaaatgagatgaAACGACACAGAGTAAAACATACTAAGATCAAGGAGTTTCAATGCTCGGTTTGCTCCAAATACTACGTTTCTAGAGGTTCTCTTAAAGGGCATATGAGGATCCATGACTCCGCCGAAGTGGACTCGAACCGAGAGAAGATGTACCAACTCATTAAAGAAATCAAAGCCATTCTTACATTCACGAACGCGACCCCATACAAGTCGAAGAACGTTCGCTACTACTGCGCTTATTGCTCGGTTGACGGACCTCATTTCGAGGACCCTGACGACCTCCGAACTCACACAAGGACCGAACACGTCGGCCACAGAACAGAGAAGATAGAATACGCCATGCGACCTTATTGGATGAACGAGGTAATCAAACTTGACATAGAGAACCTTCTTTGTACTGTTTGCTGCGTAGTCATAAACAATTGGAACGATATGTTCAAACATTTGAAAGATAAGCATAGTGTAATATTAGACCAAGCGTATACTAGAGTCATTCCTTACGTTTTGAGGACAGATCTTAAATGCGCGCTGTGCAAAGAACCTTTCAGTAACTATCTCCATTTAGACGGTCATATGAACGctcattataataattatgtatgcgATGACTGCGGAGACACTTTTCTGGCCCAAAACCGTTTAAAACAACATGTAAAAATCCATAACGTTGGCAAATACGGTTGTCGTTTTTGCGACAAAGTTTTCAGTCTAGATAAATATAGGCGGAAACATGAACAGTTGGTTCATCAGCAGCTATCTAAGTTCAAATGTCTGTACTGCCCTGAGAAGTTCACAGGTGAATACCTAAGACATCTACATTGCCTAGAAAAGCACgcagaaaaaattaaaactataacCTGCGAATTCTGTGGAGATAGTTTTACATGGAAACAATACTACATGAATCATATGAGGAAGAAACATGAGAACAAGAAATCGTATGAATGCAATAAGTGCGATAAGAAATTCTATGGTAATTATGAGCTGAAAGAGCATTTGTTAAGGCATATTGGTAATAAGAACTTTGAATGTCAAATTTGCCATAAGAAGTATGTGTCAATGAGCTCATTGAAGCAGCATGGTAAACAGCATAAGAAGAATGAAGCATGA
- Protein Sequence
- MNITETKTIAIEINMEPKIEEMEVPVNADQVRTRYKALVNDKFKKENKEPEKLEVNEMNKQKDNIKIILHNSNATIIKGFWGTGYSCNFCDEQREIPAELKMHNLEAHNNLGDEAIKVKYVSDLVIRLDITNLKCKLCNDSINTLEDFTAHLTKTHSKRIHTDIKNHIIPFKFNTDNLQCCMCKKEFKYFKLLSEHMSEHYRNYECSVCERAFINKQSMQTHSYRHNKGVFKCSHCPKVFDSRPKRSVHERVVHALSNKTRKCSFCSERFATKDLVQSHEVKAHGVKPTVFSCQACNKSYHSQNAHGNKKATKTEHDKAKSNVQTNKAQGNKNTTQAEDEKYMSSIQKNKNLLANFKETVRSVLRCTNATPVRGYWGIGYACIYCKYQTREISALKKHTLTTHSENVDELDNVKYLPDMIIKLDITDLKCEICDLKIETLEEIMNHIKVIHRQPIHFETTNHIIPFKFGNKDLSCALCPKQFNYFKHLSEHMNEHFPNYTCEQCNRFFINLRSLRTHVLRHQTGTFVCAYCSKIFDTRSKMMAHESVLHLKGSKNRKCGYCDERFMDAVRKTEHEVKEHGAPVRTFPCKECGKCFDSQRSVKNHMNHLHLQLRPHKCPECDKGFYNKNEMKRHRVKHTKIKEFQCSVCSKYYVSRGSLKGHMRIHDSAEVDSNREKMYQLIKEIKAILTFTNATPYKSKNVRYYCAYCSVDGPHFEDPDDLRTHTRTEHVGHRTEKIEYAMRPYWMNEVIKLDIENLLCTVCCVVINNWNDMFKHLKDKHSVILDQAYTRVIPYVLRTDLKCALCKEPFSNYLHLDGHMNAHYNNYVCDDCGDTFLAQNRLKQHVKIHNVGKYGCRFCDKVFSLDKYRRKHEQLVHQQLSKFKCLYCPEKFTGEYLRHLHCLEKHAEKIKTITCEFCGDSFTWKQYYMNHMRKKHENKKSYECNKCDKKFYGNYELKEHLLRHIGNKNFECQICHKKYVSMSSLKQHGKQHKKNEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -