Dtem022532.2
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743145.1:26348293-26352829[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.4e-06 0.00022 23.2 0.9 2 23 159 180 158 180 0.98 2 9 3.6e-06 0.00057 21.9 4.3 2 23 188 209 187 209 0.98 3 9 0.00037 0.058 15.5 0.4 1 23 215 237 215 237 0.98 4 9 3.5e-06 0.00055 21.9 2.8 1 23 243 265 243 265 0.97 5 9 3.7e-07 5.9e-05 25.0 0.4 1 23 271 293 271 293 0.98 6 9 5.1e-05 0.0081 18.2 0.3 3 23 301 321 299 321 0.97 7 9 1.5e-06 0.00024 23.1 3.2 1 23 327 349 327 349 0.99 8 9 9.8e-05 0.015 17.3 0.8 3 23 357 377 355 377 0.97 9 9 5.9e-05 0.0093 18.0 2.9 1 23 383 405 383 405 0.97
Sequence Information
- Coding Sequence
- ATGTCTACTGAAATGGCTagaattttagattttaaaaagatttgtcgTGCATGCTTATCGGACACCGGACCCATGAAAGATTTGCTCATGGTTTGCACACCAGAGATGTTTAAATTTTGCACGTCTGTTGAGGTTGTAGAAGGGGACAGTTTACCTCATCAAATATGCCAGGAATGTCTGGATATGCTAAACAAATCATATTATTTCAAACAAGCAGCTGTACGCTccaatcttattttaaaacagcAGGTTTTGGATGAGCAAGAACAAGTGAAAGCAGAAAGTCATTCCAATGATcatgaaataattgaaataaatgtagcAGCAGAAATCACAGGGGATGATATGCTCAGTCAGAATCTTACATCAGACAATGATATGCTAGTAGACCGTTCTATGGATCCTGCTGAAATTATTAGGAGAATAAGAAAACGAAGAGAACTGGTAAAACATCTCAAAAAGAGAACTAGAATGAAGTGTCCCAAATGTGAAAAATCATTTCAAAAGTATGATAACTTTGAAGCTCACATGAGAGTTCATTTTGGTAAAAAGCCAGACATAAAATGTCAGCACTGTGACAAGTCGTTCCCTACAGTCCGCAATCTTCACAGCCACATCCGTACTCACACAGGGGTCCGTAAATATCAGTGTTTGACTTGCGGCAAAAACTTTGCATACTTGAATGTTTTGAAGAATCATGAGATGATACACGCGGGCATTAAAAAGCATGTGTGCCACATATGTGATGCTAGATTTGTGCAGAGTTATAATTTAAAGaCCCACCTAGAAACGCATAGTAACCAAAAGAACTACATTTGTGGTCAATGTGGCAAAAAGTTTGCACAGCAAGGCAACCTCAAGACCCACTTGATTAGACATACGGGGATCAAGAACATAGCCTGCCAGGTGTGTGATATGAGGTTCTATATCAAGGGTGACCTCTTCAAACACATGCGATCTCATTCTTCAGAGAAACCATATTCGTGCCCATACTGTGATAAGAAGTTCAAAAGCCAGAGTTTTAAAGTACAGCACATGAGGACACACacagGAGAACGTCCATACGGTTGCGACCTCTGTCCTAAACGCTTCATGTCACGCAAAGACTTACGGAACCACAGAATGATACACACGGGCGAAAAGCCCCACAAATGTGTGCTATGCGACCAAGCTTTCATACAGAAATGTGCTCTCAACAGACACATGAAGGGACACTTGCAGAAAGATGCAGAAAATGCAGATAAATCACAGAATATATTACTAAGGGCTAGGTTCCAAGGAAGTGTGGCAGAGTACTCGCAATGGAATACTGATGTCTGA
- Protein Sequence
- MSTEMARILDFKKICRACLSDTGPMKDLLMVCTPEMFKFCTSVEVVEGDSLPHQICQECLDMLNKSYYFKQAAVRSNLILKQQVLDEQEQVKAESHSNDHEIIEINVAAEITGDDMLSQNLTSDNDMLVDRSMDPAEIIRRIRKRRELVKHLKKRTRMKCPKCEKSFQKYDNFEAHMRVHFGKKPDIKCQHCDKSFPTVRNLHSHIRTHTGVRKYQCLTCGKNFAYLNVLKNHEMIHAGIKKHVCHICDARFVQSYNLKTHLETHSNQKNYICGQCGKKFAQQGNLKTHLIRHTGIKNIACQVCDMRFYIKGDLFKHMRSHSSEKPYSCPYCDKKFKSQSFKVQHMRTHTGERPYGCDLCPKRFMSRKDLRNHRMIHTGEKPHKCVLCDQAFIQKCALNRHMKGHLQKDAENADKSQNILLRARFQGSVAEYSQWNTDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00952061;
- 90% Identity
- iTF_01527585;
- 80% Identity
- -