Dtem048533.4
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743161.1:3299036-3324228[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0027 0.43 12.8 1.7 1 23 22 44 22 44 0.96 2 18 0.00053 0.084 15.0 0.9 1 23 50 72 50 72 0.98 3 18 0.00053 0.084 15.0 0.9 1 23 94 116 94 116 0.98 4 18 5.9 9.3e+02 2.3 0.4 7 23 179 195 179 195 0.94 5 18 0.00053 0.084 15.0 0.9 1 23 201 223 201 223 0.98 6 18 5.9 9.3e+02 2.3 0.4 7 23 286 302 286 302 0.94 7 18 0.00053 0.084 15.0 0.9 1 23 308 330 308 330 0.98 8 18 0.00053 0.084 15.0 0.9 1 23 352 374 352 374 0.98 9 18 5.9 9.3e+02 2.3 0.4 7 23 437 453 437 453 0.94 10 18 0.00053 0.084 15.0 0.9 1 23 459 481 459 481 0.98 11 18 0.00017 0.027 16.6 3.4 1 23 488 510 488 510 0.99 12 18 2.3e-06 0.00037 22.5 0.4 1 23 516 538 516 538 0.93 13 18 7.8e-08 1.2e-05 27.1 0.1 1 23 544 566 544 566 0.98 14 18 5.3e-06 0.00085 21.3 1.9 1 23 572 595 572 595 0.96 15 18 0.0001 0.017 17.3 2.6 1 23 601 624 601 624 0.96 16 18 0.00041 0.065 15.4 0.7 2 23 631 652 630 652 0.97 17 18 1.1e-05 0.0018 20.3 1.0 1 23 658 680 658 680 0.97 18 18 0.03 4.7 9.5 0.1 1 23 686 710 686 710 0.93
Sequence Information
- Coding Sequence
- ATGAAAGGAATGGGGAAAAGTGCGACGCACGCCCACGACGCTGCCGGCCCAAAGCCCGGCGCCCACCGCTGCGGCGCGTGCGGCAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGGTGAGTATACGACAACATCTACCTACACAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGTATACGACAACATCTACCTACACAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGGTGAGTATACGACAACATCTACCTACACAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGTATACGACAACATCTACCTACACAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGGTGAGTATACGACAACATCTACCTACACAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGTATACGACAACATCTACCTACACAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCCGGCGCACGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAAGCGCATCTGAAGACTCATGCGGTTCGCCCGCGTCCCTACAAATGCACGCAATGCACTAAATCGTTCCTCACGCAACAAAATCTGAATCAGCATGAGAAAACACATTCAGGAGTCAAGGATTTCGTCTGTAATATATGCAACAAAGCCTTCAGTACGCAACACAACTTGGAAGTGCACGGCGTGGTTCACTCCGGGAACAAGGCGTTTGTGTGCAGCGTGTGCGGCAAGGCGTTCGCTAGGAGAGCTGAGTTGAGGGACCACATGCGGATACACACGGGCGAGCGTCCATTCTCGTGTGATATCTGCGGGGCTCGCTTCACTCAGCGCTCAAACTTACATTCGCATCGCAGAGCGACGCACTTCGACGACAAGCGATATCACTGCGAACTGTGTCCGAAGAGGTTCAAGAGGAGGAGATTACTGGAATACCACATAAAGGCGTCGCACACTGGCGAGCGGCCACTGAAGTGCGGCATCTGTCTGCTGTCGTTCGTGTACCCCGAGCATTACAAGAAACACGTGCGCATACATAGCGGGGAGAGGCCTTATGTTTGTGAGATCTGCGGCAAATCGTTCAACTCCCGCGACAACCGCAACACGCACCGGTTCGTCCACAGCGACAAGAAGCCCTACGAGTGCGTCGCGTGCGGCGCCGGCTACATGCGCAAGCAGCTGCTGTACGCGCACATGAACACCAGCGGACATTTGGCGGAGTCGATAGTAGTCAATCAACCTAGGGTTATCAAAGTTACTGAAAATGGCACCGACCAACCAGCAGAAATTACCCATATAGAAGCGAAAAATAGTAAATTTGATGCGATGTTTGAAGCCAGTGAAGAATTGGAGGAGAACGTAAAATCTGTCGTGAAAGCGGAGGCGGAAGTGAATCTAGAAGACGCCAAGTTCTACATAACGGAAGATAAGAAGTTAATATTACAAGATAGTGataaaacaacattaaatcTAATACAAGAGGGCGATGAGTCTACGTTGCTGACGATACATAACATAGGAGAGAGAGCTGAAGGCACTATACTAGAAGCGGTAGATGCCGATCAACTTGGGGAACAGACTGAGattgtgGCAAATGACGAAAATGGCGGGATGGTGCGTCTTATACAAATCAAACTGCCGGACGGGAACAACGGATGGGTCGCTATTAACCGCTAA
- Protein Sequence
- MKGMGKSATHAHDAAGPKPGAHRCGACGKCYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHAVSIRQHLPTQVLQLAHAAGRARQPALRRTALRLRAVREGLRLQVHAPSASEDSCVYDNIYLHKCYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHAVSIRQHLPTQVLQLAHAAGRARQPALRRTALRLRAVREGLRLQVHAPSASEDSCVYDNIYLHKCYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHAVSIRQHLPTQVLQLAHAAGRARQPALRRTALRLRAVREGLRLQVHAPSASEDSCVYDNIYLHKCYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHAVRPRPYKCTQCTKSFLTQQNLNQHEKTHSGVKDFVCNICNKAFSTQHNLEVHGVVHSGNKAFVCSVCGKAFARRAELRDHMRIHTGERPFSCDICGARFTQRSNLHSHRRATHFDDKRYHCELCPKRFKRRRLLEYHIKASHTGERPLKCGICLLSFVYPEHYKKHVRIHSGERPYVCEICGKSFNSRDNRNTHRFVHSDKKPYECVACGAGYMRKQLLYAHMNTSGHLAESIVVNQPRVIKVTENGTDQPAEITHIEAKNSKFDAMFEASEELEENVKSVVKAEAEVNLEDAKFYITEDKKLILQDSDKTTLNLIQEGDESTLLTIHNIGERAEGTILEAVDADQLGEQTEIVANDENGGMVRLIQIKLPDGNNGWVAINR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -