Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_963555695.1
Location
OY743159.1:14741881-14744286[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.9e-10 9e-07 30.6 0.1 1 45 268 314 268 315 0.94
2 4 2e-07 0.00046 21.9 0.1 2 44 322 368 321 370 0.95
3 4 4e-11 9.3e-08 33.8 0.0 1 43 374 416 374 418 0.97
4 4 2.8e-05 0.065 15.1 0.0 3 45 426 470 424 471 0.89

Sequence Information

Coding Sequence
ATGGAAATTGACGACATCGAGTTGGACTCTGAGACCGACTCAGAAGTCTACAGTGATGACGATTCGATATTCGAAGCTGATAACTTGAGCGACCGTCATGAGCTGATAGACAATGACGACGCCTTACTCAGTGTGGGGAAGTCGCGTTGCCACATGATGACCCAACAAACACACAGTGTAAATAAAAGAAGTAGTGAATCATCAGCAGCACTAGCTCAAATAGATCTAGCTTTGTCGGCAAACAAATTATTAGACGAAAAGATGAAGAGACTAGAGAGAGATCTCGCGTCAAGGCTGAATGAGTGCCGGGAGAAGCTGAAAGTGGTTCAAGGTAGCGCTGGTATACAGAATGATAAAAATGAAACTTTCCGCTACATCAATTGTGGCAGACCCTACTTTAAGGACAGCCAGAACTTTCCGGCTCCAGATAATGATGATGCTAAATTGGCAAAATCTCAGATGTATGATTTCTCCTTAGTCATCTCAGCACCTGGCTGGACAGTAAGAGACAAGTCTCAATTTGTTAACATGATGCACAAGCTGTCTATAGATATTAAGAAAAATGAGCTATTTAGTAAAATTGCTACCTTACAACGCAATAATGAGTCAAAAAATGTGGAAAGAGAAGTAATGGCCATTAGAAATGAAATTGATAATGTAAGTAAGTTGCCTTTGTATAAAGTAGCTCTTCCGATAGATAAGGAGTATGATTGGGACATGTtagcaaacaaattaaataggaGGCACACAGCACAAGAGTATCAATCCTTCTGGAAGTTATTCTTTCATCCTTCAATTAGCAAAAATAGTTGGAGCAAAACTGAACATGCAGCATTACAGAGAGTGGCTTGCCAAAATGGTAAGCAGGATTGGGATAAAATTGCTCTCCAACTAAATACGGGCAGGACTGGGTATCAGTGTTTTGTATACTATCGGACAAATATGACCAGCTCTTTCACTGGAAAGAAATGGTCTAATGAGGAGATAACATACCTCAAAAGATTGATAGAATATTTCAAAGAAGACTTTTACATTCCGTGGGGGAAGATAGCTGCAGCAATGGAAAACCGAACTAAAATTCAAATCTATAATAAGTATATGAGACTCATTGAACAAAGGAAAGGCAGGTTCCTCCCTGAAGAGGATTCGGTAATTCTTAACTGCGTGCAAAGATTTGGAGAGAATTTCAGGAGGATGACTTCTTATTTACCTGGCAGATCTATGGTCCAGATACGCGCTAGATATCAAGTCTTGAACAGAATGAGAGTGTCAACTGTATGGACTGTTGAAGATGACAGAAAACTTATTCAATTGCTGGCCAACCAAGAGCCTAACATGAACTTTTCAACAGCTGCCCAATTTTTTCCAAATATAAACAGAACAAAAGTTAGATCTAGATATATTACCTTAATTAAATGGATGAAAAAACATCCTAACTTAGATTTGGAACATGCACCGCGACGAGGCGCGCGACGTTTGAATCATGGGGAAGCCAGTGGAAACCTGATAGAAGCAGTagagaatttaaaaaattctttgATTACAACATGTCAAAAGAGAGCTAAGAAAAAGAAGTTTACTGAAGAATCTACTCACAAAGATTTAAATGATGCTATTGTTGTGTATCTTGTAAATTGTatagtaaaagaaaaagaaacagAATCAAAAAAGACTCCAGAAAATCATTTAGTGTTAGGTCCTGACCATGTTGTCTCATTTGCTGACTTGAACATTACGAACCTgcgcaaaaatataatatttttgaatgcACGCCTAGACGAGTCTACTTATATAGACAGTACCTACGAAGAAGATTATCCGTCTTTAGGAGATAGTAATCAAGATGTTTCTTTAGTAAAAGTGAAATCCTATTCTCGGAAGCCCGCCAAACAAACTATAAGGGTCAGAGACGCTCCTAATGTTTGGGGAACTCCTACGCTTTTTCAAGGCATACGCATGCTAAATCAGCGAAACTATGTGCTCCCTCCACAACTGGCAACCATTACCGGTGCTAGAGCCATAATGGCATATGTGATGTCAACCGGTCCATACAGTGCTTCTATAAACCTACATGTGCTTTGCAGACGTAACATATTATTAAAGGAGCTCTTAGATCAGGTTCTTGAAcgcttttatgttttgtttacatGGCCAATGATCTTATCCAATGAACTGCCTAATGAGATAACTGTATCGAAACTGCCAAGAACAGATTCTGTTTTTATCCGACCACCTATATTGCCAAGTGCACCTGAAGTTACGATTAATGTTAAATGtataaagaaatttaaaaatgtagatgTCACAGAAGTTATTGATCTGGATAAAGATGCAGCTAAGGATGTTGTGATTGCTGTTGAGGAGAAAATTGATACTGATGAGAAGATGGAAAAACTTCTTTGTTGA
Protein Sequence
MEIDDIELDSETDSEVYSDDDSIFEADNLSDRHELIDNDDALLSVGKSRCHMMTQQTHSVNKRSSESSAALAQIDLALSANKLLDEKMKRLERDLASRLNECREKLKVVQGSAGIQNDKNETFRYINCGRPYFKDSQNFPAPDNDDAKLAKSQMYDFSLVISAPGWTVRDKSQFVNMMHKLSIDIKKNELFSKIATLQRNNESKNVEREVMAIRNEIDNVSKLPLYKVALPIDKEYDWDMLANKLNRRHTAQEYQSFWKLFFHPSISKNSWSKTEHAALQRVACQNGKQDWDKIALQLNTGRTGYQCFVYYRTNMTSSFTGKKWSNEEITYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLPEEDSVILNCVQRFGENFRRMTSYLPGRSMVQIRARYQVLNRMRVSTVWTVEDDRKLIQLLANQEPNMNFSTAAQFFPNINRTKVRSRYITLIKWMKKHPNLDLEHAPRRGARRLNHGEASGNLIEAVENLKNSLITTCQKRAKKKKFTEESTHKDLNDAIVVYLVNCIVKEKETESKKTPENHLVLGPDHVVSFADLNITNLRKNIIFLNARLDESTYIDSTYEEDYPSLGDSNQDVSLVKVKSYSRKPAKQTIRVRDAPNVWGTPTLFQGIRMLNQRNYVLPPQLATITGARAIMAYVMSTGPYSASINLHVLCRRNILLKELLDQVLERFYVLFTWPMILSNELPNEITVSKLPRTDSVFIRPPILPSAPEVTINVKCIKKFKNVDVTEVIDLDKDAAKDVVIAVEEKIDTDEKMEKLLC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01246845;
90% Identity
iTF_00037763;
80% Identity
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