Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963555695.1
Location
OY743159.1:18891702-18899966[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-13 5.7e-10 40.4 0.0 1 37 70 107 70 111 0.92
2 2 1.1e-18 2.1e-15 57.9 0.0 1 43 280 323 280 325 0.95

Sequence Information

Coding Sequence
ATGATTCCTCTCCCAAGGCTACCGGACCAGGGCGAGAAGGCGCCGGCGTCTTCATCCCCCAACCTCGCGGAACAGCCGCTGGACCTCAGCGCGAAGTCTACCTCCAGCACCAGCGGAACACCACCTCCTGACTCCAAGCATTCGGATAACAGATTGAAGCGAGCCGTTCTAGAGAGCGCCAGCAATAGTTCTGGTCGTCGCGCGTATACTGACGAGGAACTCCAGTCAGCTGTCCGTGACATCCAGTCGGGCCGTGTGGGCACCCGCCGAGCCGCCCTCATCTACGGTATCCCGCGCTCCACTCTGCGCAACAAACTCAACAAGTTCGGCAACATAGTCGACAACGTCGACTCCGACAACGACAGCGATGCCGAACGCGCCGACTCGCCCCCCTCCGTCATTCTTAAAATACCCACTTTCCCCCCGCCAGACGACAAAAGCCCATCCCCTGCTGGACAACATCAATCCCCCATCGCACCAATAACTCCGATGCACCCCTCGGGGCACGCAGCCCCACTCAAGGGACCCTCACAGCTGCTGCTGCCGCCCTCCGTGTTCGCCGACCCTCCTTCAACACAACATCTCTTCACGTCCCTCAGTGACGTTATTGCTAAAAGCATCAGCCAGAAGTTCCAGCAACCCTTAGATAGGTCACACCACCAGTCCAGTGAACTTATGTACGCACGAGGCCCTGACCGACACGTGTCTGTCATCAAAACTCAGCCTGATAACCAGCGCTACCCTGCCCCCGGTAACTCTAAGCAAATGCCCAACAACAACGGCCAGCCGGCCGGCGGCAAGGGCACGCGGCCCAAGCGTGGTAAGTACCGGAACTACGACCGCGACAGTCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTATAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCGCCGCAGGACATCAACAAACCGCAACCACCAAAGCCGCAGCCGCCGAAGCCACCGACGAAGCCGTTCTCGAACGGTCTCAACGGGCCGGAAGCTCCGGGCTATCCTCCCGGCTACCCGTTCTGGCCAGGCAGTGGGTTCCCACCGCCACCCACTCCCGACTTGTACGCCTCGCACATGATGCGACGATTGCGCGAAGAAGCGCCGCCGCCGGCGAACGGCTCGTTCCTGGAGGGTATCATCCGGTCGAGCCTGGAGCGGCCCGCGCTGCTGCAGCGGCTGGCGGCGCCGGCCGGGGACGGGCGGCGGGCCGCGGGGCCGGGGGGCGAGGCGCGCCGCCCGCCCGCGCCCGACGCCGACGAGCCGCCGGCGCGGCGCGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCcacgccgccgcccgcgccggcCGCGCCGCAGTCGCCGCCGGCCGAGCCGCAGCCGCCGCCGGCCGCGCCGCCGGACCGCGCCTAG
Protein Sequence
MIPLPRLPDQGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHSDNRLKRAVLESASNSSGRRAYTDEELQSAVRDIQSGRVGTRRAALIYGIPRSTLRNKLNKFGNIVDNVDSDNDSDAERADSPPSVILKIPTFPPPDDKSPSPAGQHQSPIAPITPMHPSGHAAPLKGPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRSHHQSSELMYARGPDRHVSVIKTQPDNQRYPAPGNSKQMPNNNGQPAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDINKPQPPKPQPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPAGDGRRAAGPGGEARRPPAPDADEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPAAPQSPPAEPQPPPAAPPDRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00147216;
90% Identity
iTF_00122280;
80% Identity
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