Basic Information

Gene Symbol
ct
Assembly
GCA_963555695.1
Location
OY743155.1:23294150-23305419[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2 1.8e+04 -2.5 0.0 4 19 80 95 78 97 0.83
2 2 8.2e-28 1.2e-23 84.5 0.0 3 70 231 299 229 306 0.94

Sequence Information

Coding Sequence
ATGCTGAGAGTTATCCGACCAATACACTCCAACACCCATAATAACGCACGTAGCTTTTATTCCAAAGCAATAAAGTCGACTTTTGATAAAATATGGCGTAAGATCGCCCAATTAGTGGAAGACGTGCGTCGTCTCCAAGCATCGCTCACAGCGCTGCAGGAAGCGCACGCGCAGCAGTTGCAGAGGCTAGAAGAGAGGCTGGACGAGAAGAAGCAACACATCGCCAGGCTTGAAGCAAGGCTCGACACGCAGAGAGACTATGATGATATCAAAAGAGAAATCAGCATGCTCCGAGCACTCGATCTTGGCGGTGGAGAGCGATCTTTAGAGCGCAAGCCCGAGATTCGCTCGCCGAGCACTGCACCTTCACTCCGAGACCATTCGGCTGAGCGAGAGCGAAGCGCTGAGCGCCGGGATACAGGTGTGGAGGAGTGGCCCAGCACGCCGCCGCCGCTCAATAATAACACCACGCACCACAACAACAACGGGCCCACGCCGCTGCTGCCGCTGCCGCCGCCGAGCCCCTTCCGCTTCGAGGAGCACCGCACCTACAGGTTCGCGGACGACATGGGGCCCCTGCCGCCCGGCGCGCTGGTCGGACGCCTCGGCGACTCCCTCATCCCCAAAGGCGACCCAATGGAGGCGCGACTGCAGGAGATGCTGAGATACAACATCGACAAATATGCGAACACGAACCTGGACACGTTGCATATAAGCCGGAGAGTGCGAGAGCTGCTATCGGTCCACAACATTGGGCAGAGACTGTTCGCTAAGTACGTGCTGGGGCTGTCTCAAGGGACGGTGTCGGAGCTGCTGTCGAAGCCGAAGCCCTGGGACAAGCTGACGGAGAAGGGCCGCGACTCGTACCGGAAGATGCACGCGTGGGCCTGCGACGAGGCGGCCGTCATGCTGCTCAAGTCACTGATCCCTAAAAAAGGTACATTTACAAACACATTCACGATCACGACTGATTAG
Protein Sequence
MLRVIRPIHSNTHNNARSFYSKAIKSTFDKIWRKIAQLVEDVRRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRALDLGGGERSLERKPEIRSPSTAPSLRDHSAERERSAERRDTGVEEWPSTPPPLNNNTTHHNNNGPTPLLPLPPPSPFRFEEHRTYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKGTFTNTFTITTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00172518;
90% Identity
iTF_00757929;
80% Identity
-