Basic Information

Gene Symbol
-
Assembly
GCA_963555695.1
Location
OY743159.1:386138-387764[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00072 2.6 10.2 0.0 48 86 104 142 97 143 0.81
2 4 0.012 42 6.3 0.6 49 84 201 234 162 261 0.84
3 4 0.051 1.8e+02 4.3 0.1 50 83 292 324 276 326 0.82
4 4 0.15 5.4e+02 2.8 0.0 49 83 393 426 370 429 0.84

Sequence Information

Coding Sequence
ATGGATATAAACAATCCCCACAACCAAAGTTATTGGTTTGTCCTCAGGGAAGATCAAAGCAATGTCATATTCAGTAGCAATAACTTCACCATCCAGAATCCACAAATTACAGGGCAGGAGGCAAGATATATTGTGGATACAGGGGACAACAGacaatatttacaaattaacgaGACCCCTGTAGCTGTCCAAGAAAATATTTCGGAAAATAATGAAAAGGAGGTAATAAAGGCCAAAGATGATGACAACTTTTGGGataggaacaaaataaaactgttacTTACATTGTGCTTGGATAgcagatttaaaaatgtagttaaAGACAAATCCCTTTGGGAAGAAATTGCTGTGCACTTGGGTACAAGTTCTGATGAATGTAGTAAAAAATATAGAAACCTGAGGAGAACGTACATAAGACTCCTGAAAAAGAAAAGATTGGGCAAAGAGATCAAATGGGTACATTACAACACCTGTGAAGAGGTATTCAAAGAATGCAAATCACTTCCACCATCTGTGTTGGAGCCATGGGAGGAGCACAAAGTAAGAAGATTGCTTAGTCTCTACATAGAAAACTTGAACAAGTTCCGAAGTCCTGACTGCTTGCAAAAAGATGTCTGGAGGGAGATAGCGTCACAGTTAGGGACAACTGAGTACAATTGTTACCATAAGtttaagaatttaaaaagagCATACTTTAATTGGAAAGAAAAGAGTAGGGAAACTGGAAAACCAATCAAGTGGCAATATCATAACTATTTTGAgagaatattttataattacaatCCAAGTATAGGTCCATGGGACAAAATTAAAACTAGGTTGCTAATAGAGGAGTACAAGCAAATAGctgaaaagtttaaaaatccGAGATACCAAAAGAAAGAGTTGTGGAAAGAGATATCAGCATCAGTAGGGGAACCCCCCACAGACTGTGACAAAAAGTTTAGGAATTTAAAACAAACGTATATTAGATTAAAAATGAGAGCAGATACAGGGAGGTGTTTAACAAAGTGGCGCTACTTCAAAGATTTTGAAGGAATATACAGTGGAAAAACTACTTATACAAGCTCCATTGATGGACCACCTAAATTAACATACAAATTGCAAGAAGATGATTATGTCAAGCAGCTTTTAACATTCTACGTAGACAACAAGGACAGATTTAGGGATCCTctagttaaaaagaaaaatgtatggagattGTTTGCTCCAAAAATAGGCTTGTCTTTAGAAGAATGTGATCGAAAATTCCGCAACTTGAAACAAACTTACATTAGACTTGctgagaaaaagaaagaaaccgGAAAAATTAACAACTGGCCATACTattcatattttgaaaaaatatttgatgaacCCACAAGAGCAGGTACATGTAGCCATGGTGACAACTTAGACGACATGACGCTAACTGAAATAAAGAGAGTGATGCAAGAAGTGCAAGACAGGAAAGATAACGACAAGTTTGAAACTTTGGTGCAGGCTGTGGAAGAGTCCAACAACATTCAACGAGAACGAAATAGAATATTACAGGCACTGTTAGATAAAAAGTGA
Protein Sequence
MDINNPHNQSYWFVLREDQSNVIFSSNNFTIQNPQITGQEARYIVDTGDNRQYLQINETPVAVQENISENNEKEVIKAKDDDNFWDRNKIKLLLTLCLDSRFKNVVKDKSLWEEIAVHLGTSSDECSKKYRNLRRTYIRLLKKKRLGKEIKWVHYNTCEEVFKECKSLPPSVLEPWEEHKVRRLLSLYIENLNKFRSPDCLQKDVWREIASQLGTTEYNCYHKFKNLKRAYFNWKEKSRETGKPIKWQYHNYFERIFYNYNPSIGPWDKIKTRLLIEEYKQIAEKFKNPRYQKKELWKEISASVGEPPTDCDKKFRNLKQTYIRLKMRADTGRCLTKWRYFKDFEGIYSGKTTYTSSIDGPPKLTYKLQEDDYVKQLLTFYVDNKDRFRDPLVKKKNVWRLFAPKIGLSLEECDRKFRNLKQTYIRLAEKKKETGKINNWPYYSYFEKIFDEPTRAGTCSHGDNLDDMTLTEIKRVMQEVQDRKDNDKFETLVQAVEESNNIQRERNRILQALLDKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00973738;
90% Identity
iTF_01339743;
80% Identity
-