Basic Information

Gene Symbol
Jarid2
Assembly
GCA_963555695.1
Location
OY743136.1:32301032-32340912[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-19 5.9e-16 60.3 0.1 13 89 1000 1073 989 1073 0.90

Sequence Information

Coding Sequence
ATGGCTAGGGCACGTTGTCGCCGCGTTCAAGCGCAGCGCAAGTTCGCGCAGGGCGCTTACGTGCCGCCAAATGTGGTCGCCGTCGCTGCTGCCGACAACCGGCGGGACGCCGCTCAAGAATTAAGAAATGTTATTGCTTTAAACAACATGACGGCTACTAGCTTGTTGGATGCCGTGTCTCTACAGGTTCCTGTAGTGATCCTTGAAAGGCTGCGCGACACGAACCTGGCCCACTACGTGCATCCGCCCCCTTCGCAGAGCAAGACTGAAACACGATCCCGGGGATGCCCTCATGAACGTGTGAACAACAATGTGGCCATAACTAAGAAGCCTGCTGAGCCACCAAAGTTCCGAACTCGAAAAAAGAAAACTGAACATAAAAATGAACATCCTATGGCACTAAGATCAAGGCGCGCGAGCAAGGTTGAATTGAACAAGATAATAGCTAAAAGCTGTACTCCTCTCAGAAAAGTTACCTTGAAGCGCAAGAAGAACTCTTCTGATGAGGATGAACCCCTCATATTCCAGAAAACTCGCCTCAAGCAGGAAGCAAAACAACAGAGCACTACAAAACAGACCGCTGTTAGGGATAGTGCTCCTATGGAGAACACTCAGAAAAGGTTTCTTCAGAAATGCTCTCCAAAGCAGCCTGCGCATGTCGCACCAGAGTTCCCCTTACCAGAGTGCCCCATTCCGGATTTTCTAATCACCGTCATCAAGGAAGACCTCACAGATGAAACGGAAAATAAGGAAGACCAGGTCACCCCAGATGACTCGGTTATCATAGTCGTCCCGAATGACCCGCTATCCCCAGATGTCATAGAAGATCTCGTTGGCCCGGTTGTCCCAGTCGCCATGGATGACCCAGTTATCCTGTCCGTCCCGGTTGTCCCAGTCGCCTCGGATGACTCGGTTATACCGCCCGTCCCGGTTATGCAGGATGATCACGTTTCCTCGGTTGTCCCAGTCGTCACGGATGACCCAGATATCCCGCCTGGCCCGGATATGCAGGATGATCTCGATGCCCCGCTTGTCCCAGTCGCCACGAAGGACCCAGTTATCCCGCCCGGCCCGGTTATGCAGGATGATCTCGTTGCCCCGCTTGTCCCAGTCGCCACGGAGGACCCAGTTATCCCGCCCGGCCCGGTTATGCTGGATGATCTTGTTGCCCCGCTTGTCCCAGTCGCCCTGGTAATGCAGGATGATCACGTTTCCCCGGTTGTCCCAGTCGCCACGGATGACCCAGTTATCCCGCCCTGCCCGGTTATGCAGGATGATCTCGATGCCCCGCTTGTCCCAGTCGCCACGGAGGACTCAGTTATCCCGCCCGGCCCGGTTATGCAGGATAATCTTGTTGCCCAGCTTGTCCCAGTCGCCCCGGTAATGCAGGATGATCACGTTTCCCCGGTTGTCCCAGTCGCCACGGATGACCCAATTATCCTGGCCTGCCCTGTTATGCAGGATGTTCTCGATGCCCCGCTTGTCCCAGTCGCCACGGAGGACCCAGTTATCCCGCCCGGCACGGTTATGCAGGATGATGTCGTTGCCCCGCTTGTCCCAGACGCCACGGATAATCCATTTATCCCGACCATCCCGGTTATGCAGGATGTCTCGAATGTTCCGATGGTGCTGGGTTATGACATGAAAAGGGCGAAAGTTTACGGGGTTTCTGAGAAGTATATCGAAACACTGTCGGGTTTGGATGAGGTATTCAGGGAGGAGCGTGTTGGTGTTGGATACTCGAAGGATGGTGATGAATCGCTGGTCAATGATGAAGTTCCCGAGATCTCGAATAAAGTAACGGTGTTTTTGCACATTGTACCGATACCCAAAAACCCTGTTTCCAAGGGCCCGAATGACAAACCGCTGGTTTTGCATGATGTACCGTTGGTCAACGATAATGTTCCGGAAGGCCCGGATGATGTACCGGTGATTCTGCACGATTTACCGTTGGTCAACGATGATGTTCCGGAGGTCTCGCTTGATGTACCGGTTATTTTGCGTGATGCACCGATGGTCAACAATGAGGTTCCAGAAGACACGGATGATCTACCGGTGGTTTTTAATGACGTGCCGATGGTCAACGATGATGTTCCGGAGAACACGGACGTCCCAGGTGTCCCATTGATCAAGAGTGTCATGACGATAGAGGATGATGTAATGGCCCAGGAAGACGTGATGGATCCACCGATTACGAATCTACGAATAGCTTCTCCAGACGGTCAAAACAACAATACAGAGGGGCAAAACGACATTACGGAAATTCTAAGGATAGGTGTATCATCCGACAGCACTGCTGAGTTGAGCGATGCTACGACTGATGATCAGGAGACGCCAACAGCTGAGAAGAAATTATTGGACCCAAGAGCTGTTAAAAAGAAGTTAGCTGCGATGCACGAGCGCATGAGAGAGGAAAAGGAAAGAGAGATTGCCCGTGTCGAGGAAGAGAAGAGACAGGAAATATCACGGATTACGGCGGAGAAGAATAGTGCTGTCGCGCAGATATCCCGCTACCACGAGCGGCTTAGCCAGATGGAGAAGGAGAAACAAAGAGAGTTTGCTCGCTATAAGCTTAAGATCAGAGCAGAAGTTATATCTAAAATAGAGGCTACTCGCCGTATGTGCACTGAAGTCGACGGCATGGCGGCGAATCTTGACAAAGAAAAGGATGCCAAGAAAATGGATCCGGAAGAACTTTCAGATCAAGATGCGCCTGGCACCAGCAGCTCCACGCTGCCAGCGGATGGCGGGTTGCTAGTAGACGCTCCTGTATACCACCCTAGCGAAGAAGATTTCCGTGATCCACTTCGCTTTTATGAGAAGATCTGGCCAGTAGCAGTTAGATTTGGCATCTGCAAGATGGTGCCCCCTCCTGGTTGGAAGCCACCCTTTCGAGTGCATGACGAAATGAGATTCGTTGTTACGAACCAATACATTTCGCGACTGTTCAACCGCTGGGGACCGGCCGCAAGAGAACTTTGCGCAATCAAGTTGTCTCTGGCACAACAAAAAGTTAACTTTACACGACCACCGTTGCTGGACGGTGTCGAAGTAAACTTACCGAAGTTATACCACCTCGTGCAACGGCACGGCGGTTTAGAAACAGTGTATAACAAGAAGCGATGGGGCAAGGTCGCAGAAGAAATGAAATTTAATAAAGGGCCTAATACTGAGAGGAAACTCGACCTAATTTACGTAAAGTATCTGCTTCCATACGACACGCTTTCTCATCATGAGCGCCAGGATATTATGCGGAAAGTAGAGATCGCATGGAACAGAAAGAATCAAAAGCTTTTGGACCGCGCCTTGAACCCGCTAAACCGCCAGAAGCGATTGCTTGGCTTAATGGACTCTTCTGACGATGAGACAGAAGACGAAGACACGGTGGCCGCTGTCAATGAGGCGGAAGATTGTATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAGAAAGATTGCCACCATGACGTACGAAAACACATTCGGACAAGGTTCGGAGGCCTCCGACCCTCCCGATTTGGCCAAAATCGAGGAGTATTACTGGCGCCTCGTAACGCTGGGCACCGAGCACGTGTGCGTGCACACCGCGGCCATTGACACCGGCAAAGAAGGGTACGGCTTTACCAAAAATAAGTCTGACTCCTATGGACGCCACCCTTGGAATCCGAAGATTGTTAGCCAGAATCCTCGCAACGTGCTTCAGTATTTGGGTCCGGTGTTGGGCGTAACGGTGCCCACTCTACTTCTAGGAATGCTATTCTCGACCTCCTGCTGGCACAAGGATCCACACTTAGTGCCCTGGCTTGAGTTGCAGCTCTTAGGACCCGAAAGGATCTGGTATGGCATCCCAGCACATCAGGCGGATAAATTCAGAAAAGCTGTAGAAACTCTTTGCCCCACATCTTGCCAAAACAAATTCCACTGGCTGCCGTCGGACATCACGATGATTCCGCCAAACTTGTTACGCGAGCACAACGTGACGCTGTCGCGCGTCACGCAGAGGGACGGCGAGTACATCCTGGCCTTCCCGAACGCCTACACCTGCTGCATCAGTACCGGCTACACTGAGTCGGAGAGTGTATACTTCGCACCGCCATCCTGGCTTGAGAATCTGTTGACAGTCTTCAAGgAGGCCCGAGAAAGTTGCGAACCGACAATGTTCGCAATGGAACACCTGCTCTACAATATAGGCAAAGACCCGAAAGCTGATCCCACCATACTGAAGATCGCCCAGCCATTATTTGACAAGATGTTGCGCGATGAGGTCACCAACAGGCAGATGCTGCAAGAGCGGGGACTGCCATTTTTTCAAGACCTGCTGAGCGCCAACGCATCACGTAAGAAGAACACAGCGAACCCGTCCAACCCGCGAGACCAAGATGAGTGCGAATACTGCAGGGCCACGTTGTATCTGTCGAAGGTAAAGGGGCTCACCGGGAGAAATACAGTTTTATGCCTAGAACACGCACTCAAATTACTTGACACAGAAAAACACAAGGACACAAACGTAGATCAACTACAAGTTCTGGTGCACGTGAGTGTGAAAGAACTAAATACCGTGCACGACGACATGAAGCGTCGCCTCGGCATCCCGGTCGTCTAA
Protein Sequence
MARARCRRVQAQRKFAQGAYVPPNVVAVAAADNRRDAAQELRNVIALNNMTATSLLDAVSLQVPVVILERLRDTNLAHYVHPPPSQSKTETRSRGCPHERVNNNVAITKKPAEPPKFRTRKKKTEHKNEHPMALRSRRASKVELNKIIAKSCTPLRKVTLKRKKNSSDEDEPLIFQKTRLKQEAKQQSTTKQTAVRDSAPMENTQKRFLQKCSPKQPAHVAPEFPLPECPIPDFLITVIKEDLTDETENKEDQVTPDDSVIIVVPNDPLSPDVIEDLVGPVVPVAMDDPVILSVPVVPVASDDSVIPPVPVMQDDHVSSVVPVVTDDPDIPPGPDMQDDLDAPLVPVATKDPVIPPGPVMQDDLVAPLVPVATEDPVIPPGPVMLDDLVAPLVPVALVMQDDHVSPVVPVATDDPVIPPCPVMQDDLDAPLVPVATEDSVIPPGPVMQDNLVAQLVPVAPVMQDDHVSPVVPVATDDPIILACPVMQDVLDAPLVPVATEDPVIPPGTVMQDDVVAPLVPDATDNPFIPTIPVMQDVSNVPMVLGYDMKRAKVYGVSEKYIETLSGLDEVFREERVGVGYSKDGDESLVNDEVPEISNKVTVFLHIVPIPKNPVSKGPNDKPLVLHDVPLVNDNVPEGPDDVPVILHDLPLVNDDVPEVSLDVPVILRDAPMVNNEVPEDTDDLPVVFNDVPMVNDDVPENTDVPGVPLIKSVMTIEDDVMAQEDVMDPPITNLRIASPDGQNNNTEGQNDITEILRIGVSSDSTAELSDATTDDQETPTAEKKLLDPRAVKKKLAAMHERMREEKEREIARVEEEKRQEISRITAEKNSAVAQISRYHERLSQMEKEKQREFARYKLKIRAEVISKIEATRRMCTEVDGMAANLDKEKDAKKMDPEELSDQDAPGTSSSTLPADGGLLVDAPVYHPSEEDFRDPLRFYEKIWPVAVRFGICKMVPPPGWKPPFRVHDEMRFVVTNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVAEEMKFNKGPNTERKLDLIYVKYLLPYDTLSHHERQDIMRKVEIAWNRKNQKLLDRALNPLNRQKRLLGLMDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFRKIATMTYENTFGQGSEASDPPDLAKIEEYYWRLVTLGTEHVCVHTAAIDTGKEGYGFTKNKSDSYGRHPWNPKIVSQNPRNVLQYLGPVLGVTVPTLLLGMLFSTSCWHKDPHLVPWLELQLLGPERIWYGIPAHQADKFRKAVETLCPTSCQNKFHWLPSDITMIPPNLLREHNVTLSRVTQRDGEYILAFPNAYTCCISTGYTESESVYFAPPSWLENLLTVFKEARESCEPTMFAMEHLLYNIGKDPKADPTILKIAQPLFDKMLRDEVTNRQMLQERGLPFFQDLLSANASRKKNTANPSNPRDQDECEYCRATLYLSKVKGLTGRNTVLCLEHALKLLDTEKHKDTNVDQLQVLVHVSVKELNTVHDDMKRRLGIPVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-