Ddia003199.1
Basic Information
- Insect
- Dasypogon diadema
- Gene Symbol
- stc
- Assembly
- GCA_006980735.1
- Location
- jcf7180002953012:130610-134656[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.94 1.4e+04 -4.0 1.6 15 19 324 328 323 328 0.81 2 15 0.034 5.1e+02 0.6 0.5 4 10 357 363 356 365 0.95 3 15 2.6e-05 0.4 10.5 21.6 2 19 364 386 359 386 0.84 4 15 0.8 1.2e+04 -3.8 0.9 6 10 412 416 411 416 0.88 5 15 5.6e-07 0.0085 15.9 13.6 3 18 424 439 422 440 0.91 6 15 0.69 1e+04 -3.6 2.7 7 13 444 450 441 451 0.77 7 15 1.3e-10 1.9e-06 27.5 14.1 1 19 480 498 480 498 0.98 8 15 3.7e-06 0.057 13.2 14.7 4 18 546 560 539 561 0.88 9 15 0.002 30 4.5 9.0 1 11 601 611 601 612 0.96 10 15 0.2 3e+03 -1.9 1.0 4 10 616 622 615 622 0.91 11 15 2.2e-10 3.4e-06 26.7 15.5 1 18 628 645 628 646 0.97 12 15 0.96 1.5e+04 -4.1 0.6 6 10 675 679 675 681 0.72 13 15 1 1.5e+04 -8.8 11.0 10 18 693 702 682 703 0.75 14 15 1.8e-08 0.00027 20.7 14.0 1 16 739 754 739 764 0.92 15 15 7.4e-08 0.0011 18.7 15.3 1 19 771 790 771 790 0.96
Sequence Information
- Coding Sequence
- ATGTCGGAATTTTCGCAACAAGGAAACAGTGAACATAACAAAGATAACGGTAGTACGAGTAACAGTGAGAATTACGTTGATTTCAATCAGTTTCTGTTGCAACACAACTTGGCCAATCCGGTCAGCGATGGCCTAGGCATGGCGAACTACTTTGGGTTCTATCCCAGTCAGGTGCCTTACATCCCTGTGCCCAATTTACTGTACAACGGTTTGGACGACTTTGATCAGCAAATGTTGCCCCAGTTCAACGCCTACCAAAGCGACCTGGCCCTGGCGTCAAACTTGTTGCCAACTGCCGCTGAATTCATTCCAAGATTGACCAACTTGCACTTGTCTGGCCCCGAGGATAACGCCCCACCTGCTACGGCTTCTCGTTCTACTCCAACGCTCAATGAACCGGCTCCGAATGATTCCTCGGAGGAGAGGAACAGCAACCAAAACCCAGTCCGGAACGGTAACTACACTGGAGCTATCAGCAAGAATTCGACCTCGCAAAATCGTCCCAGGTATGGGGGACAGGAGAGACAAGGGAGAGGCTCCGACAGTCGCTACTACCAGAATGGGTCCTATTCTAACAGGAATAGGCAGAACTTTGATAACAATCGGAACACGAAGCGGCGAGACTACAATTGGCGGAATAGCCGGGAGTTTCCAGAGAACCGGCACTACGACAGGCGAGAGAATGGTGACTTGGAGCAGGGCGTCTTCCACAAAACCGTGAGTAAGTGTGATGTTGCCTCAAAGGACAGTTCTTCATCGATTTCCAGCGATGAGAAGAGCAACGAAAAGCTGTCACAGCGCGATAAACTCATCAGCGAGATTGAGGCCCGGAAGCTGGAGTGCCTCGTGTGCGTGGAACAAATTAAAGCCCATCAGTCCGTGTGGTCCTGCAACAACTGTTTTCACATCCTCCACCTGAACTGCGTCATCAAGTGGGCGTCCAGTTCGAAATCTGAAGAAGGCTGGCGGTGTCCCGCTTGCCAAAATATGACGAAAGCTGTGCCCCGCGACTATTATTGCTTCTGTGGGAAAATGAAAAACCCACAGTACAGTCGAGGCGATGTGGCCCACAGTTGTGGTGAGGTCTGCGGCCGTAAAGAGGGTTGTCAGCACCCATGTACGCTGTTGTGTCACCCCGGCCCTTGCCCTCCATGCCAGGCAAATGTAACTCGGGCTTGTGGATGCGGCCGAATGTCCAAGACGATGCAGTGCTGCCTTAAGGAAGACATCCAGTGCGAGGCAATCTGCGAGAAATTATTAAATTGCGAGCTGCACACTTGCGAGAAGACGTGTCACCAAGGAAAGTGCCCAAACTGCGAGCACAAAGTCACTCAGAAATGCCACTGTGGAAAACAAGAGCGTCAAGTCGCCTGCACACGAGACTCCAACGAAAAGAAAAACTTCTCCTGTGGGAAGCCTTGCAGCAGAGACTTGTCCTGTGGAAATCACAAGTGCAAGGACGTTTGCCACTCCGGCGAGTGTAAACCATGCAAGCTGACCCCAGAGATGATAACCTCCTGCCCCTGTGGCAAGATGCCAGTTGTCGAAGGTCAGAGGAAGTCCTGTTTAGATCCGATTCCACTTTGTAACGGCGTATGCGGAAGGACTCTTAAGTGCGGTCCCCCTGCGTTTCCTCATCACTGCATCAGTAAATGCCACACCGGCAACTGTCCTCCTTGCAACAAGCAGACGGCTGTAAAGTGCCGGTGCGGTCACATGGACCAGATGATTAAATGCCGACAGTTATCCTCCCGTGCCGACGATGCTCGCTGCAAAAAGCGATGCACCAAAAAGAGGAACTGCGGTAGGCACAAATGCAACCAGGAATGCTGCATAGACTTTGACCACATCTGTCCGCAAACCTGCAACTATACTCTGTCCTGTGGCAAGCACAAGTGCGACCAGCCCTGCCACAGAGGAAACTGCCCGCCATGCTACAGAAGCTCCTTCGAGGAATTGTACTGCGAGTGCGGTGCGAACGTGATCTACCCACCGGTCCCGTGTGGAACAAAGCGACCTGTTTGCGATAAGCCATGTTCCCGTCAGCACCCGTGCGATCATCCCGTGCAGCACAACTGCCACTCGGCTACCACATGTCCGCCGTGTATGATTTTCACCACGAAGTTCTGTTTTGGGGGTCACGAACAACGGAAGACTATTCCGTGCAGCCAGGCGAGTTTCAGTTGCGGGCTTCCTTGCGGAAAAGAGTTGTCTTGTGGCCGGCATAAATGCATCAAGCCATGCCACGACGGTCCCTGCCAGGTTGAAGGTGACATTTGCAAGCAGAGCTGCACCAAGACCCGATCGATCTGTGGACACAAATGCAACGCACCTTGTCACGAAGGGGACTGCCCCGAAACTCCCTGCAAGGAAATGGTCGAAGTGACTTGCGAGTGCGGTAACCGCAAACAAATGCGTACTTGTCAAGATTTTTCCAGTGAGTTCCGCCGAATTGCAACGGCCCAGCTAGCGTCATCCATGCAAGAGATGCAACGTGGAAACCTTGTCGAACTCAGCGATATTATGGGCCCCATAAAAATGACCACCAACAAGACGCTCGAATGCAACGATGAGTGCAAAGTTCTGGAGAGGAACCGTCGTCTAGCGATCGCGCTGCAAACTCGCAACCCTGACGTGCCTTCGTCCAAAATCCTAACCAAGTACTCGGACTACATAAAGGGCTGGGCTAAGAAAGATCCCCAGCTGGTGCGGATGGTACACGACACCCTCACAAATTTGGTCAAGCTGGCCAAAGACAGCCCCCACAAGTCGAGGAGTCATTCTTTCCCCACCATGAACCGCGAGAAGCGCCACCTCGTCCACGAGATGTGCAACATGTTCGGGGTTGACTCAGTCGCGTATGACGCGGAGCCGAACAGAAACGTTGTCGCCACAGCGTACAAGGAGAGGTGTTGGCTGCCAGCTATGAGCATTATGGAAGTCGTCCAACGCGAGAGCGGACAGAGGAGGGTCCCCGTGCCCAATAACAACGCTTGGGGATTGAAGAAATAA
- Protein Sequence
- MSEFSQQGNSEHNKDNGSTSNSENYVDFNQFLLQHNLANPVSDGLGMANYFGFYPSQVPYIPVPNLLYNGLDDFDQQMLPQFNAYQSDLALASNLLPTAAEFIPRLTNLHLSGPEDNAPPATASRSTPTLNEPAPNDSSEERNSNQNPVRNGNYTGAISKNSTSQNRPRYGGQERQGRGSDSRYYQNGSYSNRNRQNFDNNRNTKRRDYNWRNSREFPENRHYDRRENGDLEQGVFHKTVSKCDVASKDSSSSISSDEKSNEKLSQRDKLISEIEARKLECLVCVEQIKAHQSVWSCNNCFHILHLNCVIKWASSSKSEEGWRCPACQNMTKAVPRDYYCFCGKMKNPQYSRGDVAHSCGEVCGRKEGCQHPCTLLCHPGPCPPCQANVTRACGCGRMSKTMQCCLKEDIQCEAICEKLLNCELHTCEKTCHQGKCPNCEHKVTQKCHCGKQERQVACTRDSNEKKNFSCGKPCSRDLSCGNHKCKDVCHSGECKPCKLTPEMITSCPCGKMPVVEGQRKSCLDPIPLCNGVCGRTLKCGPPAFPHHCISKCHTGNCPPCNKQTAVKCRCGHMDQMIKCRQLSSRADDARCKKRCTKKRNCGRHKCNQECCIDFDHICPQTCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGANVIYPPVPCGTKRPVCDKPCSRQHPCDHPVQHNCHSATTCPPCMIFTTKFCFGGHEQRKTIPCSQASFSCGLPCGKELSCGRHKCIKPCHDGPCQVEGDICKQSCTKTRSICGHKCNAPCHEGDCPETPCKEMVEVTCECGNRKQMRTCQDFSSEFRRIATAQLASSMQEMQRGNLVELSDIMGPIKMTTNKTLECNDECKVLERNRRLAIALQTRNPDVPSSKILTKYSDYIKGWAKKDPQLVRMVHDTLTNLVKLAKDSPHKSRSHSFPTMNREKRHLVHEMCNMFGVDSVAYDAEPNRNVVATAYKERCWLPAMSIMEVVQRESGQRRVPVPNNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00454218;
- 90% Identity
- -
- 80% Identity
- -