Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.017 86 3.1 0.1 22 29 17 24 13 24 0.87

2 3 5.5e-20 2.8e-16 59.0 8.3 1 29 37 65 37 65 0.98

3 3 3.2e-13 1.6e-09 37.4 1.8 1 22 82 103 82 106 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.017	86	3.1	0.1	22	29	17	24	13	24	0.87
2	3	5.5e-20	2.8e-16	59.0	8.3	1	29	37	65	37	65	0.98
3	3	3.2e-13	1.6e-09	37.4	1.8	1	22	82	103	82	106	0.93

Coding Sequence: TTAATCAACAACTACTCTAGTTGGGACTTTTACGAGGTAGCTAACAGCAGTTTAACGGGGTGCCCACGTAGCGATAGGAATCATCTGCAATCGCATTCACAAGAACTTAAATGTCCTACACCCGGTTGTGATGGGTCTGGTCACGTAACTGGTAACTACTCATCTCATCGCAGTTTATCTGGGTGTCCACGTGCGAACAAACCAAAAAGTAAACCACGTGATGGTCAGGATTCCGAGCCATTAAGGTGCCCAATTCCAGGATGTGATGGTTCCGGACATTCAACAGGCAAATTTTTATCACATAGAAGAAATGCAGCTTGGCAAGTTGAAGCTAGTGGAGATAATCACTTTTCAGATATTGCAACATCGATGTATTATGCGATGAAAACATCTTCACTAAATTTCTCAATGACTGTATTCATTGCACATTGGTACGAAGATCCTTATACTTCAGAAGACTGA
Protein Sequence: LINNYSSWDFYEVANSSLTGCPRSDRNHLQSHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHSTGKFLSHRRNAAWQVEASGDNHFSDIATSMYYAMKTSSLNFSMTVFIAHWYEDPYTSED

Sequence clustering based on sequence similarity using MMseqs2