Basic Information

Insect: Dasypogon diadema
Gene Symbol: GLIS3_1
Assembly: GCA_006980735.1
Location: jcf7180002952962:16158-22844[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00068 0.046 14.0 0.0 2 23 295 319 294 319 0.91

2 5 0.17 11 6.5 0.6 1 23 328 355 328 355 0.84

3 5 7.9e-07 5.3e-05 23.2 0.5 2 23 362 385 361 385 0.97

4 5 9.6e-05 0.0064 16.7 0.6 3 23 393 415 391 415 0.92

5 5 9.1e-05 0.0061 16.7 0.2 1 23 421 445 421 445 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00068	0.046	14.0	0.0	2	23	295	319	294	319	0.91
2	5	0.17	11	6.5	0.6	1	23	328	355	328	355	0.84
3	5	7.9e-07	5.3e-05	23.2	0.5	2	23	362	385	361	385	0.97
4	5	9.6e-05	0.0064	16.7	0.6	3	23	393	415	391	415	0.92
5	5	9.1e-05	0.0061	16.7	0.2	1	23	421	445	421	445	0.94

Sequence Information

Coding Sequence: ATGTTCATAAAGTGTGATTTGGAGCTGCCCCATCTGAACAATCCCCTACAAACACCCTTACCGCAAAATGTCACTGTCAACCTGAACATTCCGGCCCAAAATAATAACCTTATAGATCCAATGACAACATCCATATTAACTCCAACATCTCCTTTCACGTCATTCCATTCGCCATCCTGTCAATTCATCTCCAGTCCATCAAATTGTGAAAGGCATCAGATTTTTATGCCGGCGGATCCGAAATCTGTGCAAAATGTTAGCAGTGCCGGGAACGCAATCGATTTCGTGGAAGCGTCCCCATTCATTAATACCCCCAATTCAATATTCGATGAGACATGTACACCAGCCTACAATGACCACGCCAAAGAAGATGTCTTCAAATTCGAACCAGAAGACATTGAACGGCTGACGAGATCCTGCAATTTCAATGAGTACATCAATCTGGACATCGAATATTTTAACTACGATGAAATAAACTGTCAATCAAAGAACCAATCACCGTGCTCCTCACCTTCCCTTGACCCCTGGATGGCTCTGAATTTACGAGATTCATCACCAAAAATAGAAAATACTGCAAAAAATCAGAAGCTACCTTCTATAGTAACAACATTTGGATCACATTTCAGCCCGAACGTATGTCACATCAACCCAAATGGCAGCGAAAATGAGGACAATGTGAACAAATTGGATATGTACCCACAGTCGTATGATTCCTACTTGCATTTATCAGAAAATTACAACACTGAACCCACTCCTGAGAAGCCTAACAGGGAGCACAAAGATATTTGGACGGTCAATGAAGATGAATGCACTACAACTACAAAGGAATTGAAGATAAAACCGCAGAATCTGTACCTAATTAAGGATGACCGAATGGGCCTGGAGTGCAGGTGGACTGATTGCAACGAAATTTTCCCAAATCAAAGTGCTCTTGTTGCTCACATAGAAAAAAAGCATGTCGAAGTTAAAAAGGGGGAAGAATTCTCTTGCTTCTGGTTCGAATGTCCACGACGTTACAAGCCATTCAATGCACGCTATAAGCTACTAATTCACATGAGAGTTCACAGCGGTGAAAAACCTAATAAATGTCCGTTTATTGGATGCAATAAGGCTTTCTCCAGGCTGGAGAATTTAAAAATTCACCAAAGATCTCATACGGGCGAAAGACCTTATGGCTGCCAATATGAAGGATGCTCCAAGGCTTTTAGTAACAGTTCGGACCGAGCTAAACATCAAAGGACACACTACGACACGAAACCGTATGCATGCCAAATTCCTGGTTGTGTAAAACGATATACAGATCCATCGAGTTTACGTAAGCATGTCAAAAATCATTCAATTCGGGATCAGACAAACGGAAGAAGGAAATCCATTCGAGACGTTAATATTCTTTCCGGCTCAGTATCTATGAAAATCCGGCGGCATTCCGAATCATCTGTGAGTACACCGCCCACACCAACAACCCCTTGTACACCCCAAACCGCACCGTACTCGTTTCGAAATGATTATTTCATATTCGATGATGTTTTTAATGACATAAGCACCAAACCTACCCCGACGAATGGAACTCCAGCTTCCTGTCCACCCAGTGCAACTAACAACGAATCACATCCGCAAAATTTTATTAAACTGGACCGGGACCAGGACGCCCGGGCTAATAATAACTCGATGAACTTTAATGAGCTCTCTAATTGCATTGTGACGATAGAGAGCAATCAGAGCGAAAATCCAATTGAAATTGCCATCGACCAGTCGGGGACAAATGATATCAATGATCAGCCCGGGGACCAGTCATCTGTTAATCACACGGAAGACGAATTTGTCTCGTTTGAGTACGTGAAAAAGCTGCTCGCCGAGGATATGGATTATTTGGATACAGATTTGGGGCATAATTTCGACATGGACTATTTGAACGACATCATTTGA
Protein Sequence: MFIKCDLELPHLNNPLQTPLPQNVTVNLNIPAQNNNLIDPMTTSILTPTSPFTSFHSPSCQFISSPSNCERHQIFMPADPKSVQNVSSAGNAIDFVEASPFINTPNSIFDETCTPAYNDHAKEDVFKFEPEDIERLTRSCNFNEYINLDIEYFNYDEINCQSKNQSPCSSPSLDPWMALNLRDSSPKIENTAKNQKLPSIVTTFGSHFSPNVCHINPNGSENEDNVNKLDMYPQSYDSYLHLSENYNTEPTPEKPNREHKDIWTVNEDECTTTTKELKIKPQNLYLIKDDRMGLECRWTDCNEIFPNQSALVAHIEKKHVEVKKGEEFSCFWFECPRRYKPFNARYKLLIHMRVHSGEKPNKCPFIGCNKAFSRLENLKIHQRSHTGERPYGCQYEGCSKAFSNSSDRAKHQRTHYDTKPYACQIPGCVKRYTDPSSLRKHVKNHSIRDQTNGRRKSIRDVNILSGSVSMKIRRHSESSVSTPPTPTTPCTPQTAPYSFRNDYFIFDDVFNDISTKPTPTNGTPASCPPSATNNESHPQNFIKLDRDQDARANNNSMNFNELSNCIVTIESNQSENPIEIAIDQSGTNDINDQPGDQSSVNHTEDEFVSFEYVKKLLAEDMDYLDTDLGHNFDMDYLNDII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -