Ddia012833.1
Basic Information
- Insect
- Dasypogon diadema
- Gene Symbol
- ZNF217_1
- Assembly
- GCA_006980735.1
- Location
- jcf7180002946645:60622-67126[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 6.3 4.2e+02 1.5 0.4 2 22 237 257 236 259 0.87 2 20 3.9 2.6e+02 2.2 0.2 8 21 275 288 275 291 0.86 3 20 0.017 1.1 9.6 5.5 1 19 301 319 301 322 0.92 4 20 0.039 2.6 8.5 1.3 3 23 334 354 332 354 0.87 5 20 0.0017 0.11 12.8 0.3 3 23 363 384 362 384 0.95 6 20 0.15 9.8 6.6 0.8 3 23 392 412 390 412 0.94 7 20 0.0094 0.64 10.4 1.3 1 23 418 441 418 441 0.90 8 20 8.3e-05 0.0056 16.9 0.8 1 23 447 469 447 469 0.97 9 20 4.1 2.8e+02 2.1 0.2 3 23 480 500 478 500 0.89 10 20 0.00019 0.013 15.7 0.2 1 23 516 538 516 538 0.98 11 20 0.31 21 5.6 5.1 1 23 543 565 543 565 0.96 12 20 0.45 30 5.1 2.0 1 23 581 605 581 606 0.92 13 20 0.00038 0.025 14.8 0.4 2 23 612 634 611 634 0.96 14 20 0.00067 0.045 14.0 1.3 1 23 639 662 639 662 0.96 15 20 0.00021 0.014 15.6 1.0 1 23 667 690 667 690 0.95 16 20 0.0016 0.11 12.8 0.1 2 23 694 716 693 716 0.96 17 20 0.15 10 6.6 3.1 1 23 722 745 722 745 0.89 18 20 0.0063 0.42 10.9 0.2 1 23 751 773 751 773 0.98 19 20 8.8e-08 5.9e-06 26.2 1.5 1 23 779 801 779 801 0.98 20 20 0.0011 0.072 13.4 0.6 1 23 807 832 807 832 0.96
Sequence Information
- Coding Sequence
- ATGTATGCAGGATGTCCAGGAAGGCGGTCAAGCTTAGAATTAGAACTACAGAAATTATTAGGAATCTGCTTCGATATAGATGTTAAAATTCGCCTGAATGAAATTCAAGCTCTGTGCGAGGATTGTCTTAATGAACTTATTGATACTTACGATATAATACAGAGGAACGAAGAAAGTGGCAAGCCTTCCAGTAGCAATTCCGAACTTAAAGACATTAAGGCTGAGGTGGAGTCGGTTAGCGATAGTTCTGACTGCGAGCAGATTTCAGACGATGAGCTCCACAGAATAGGTGAAGGCGGTGAATGTAGTTTTTTTGACAAGAGCCAGAGCAGTACTGGTGATGAACTTTCAAATCAGTCTGATTTAGGGAGTACAAAATATGGTCAGCAAGGTACCTGTGCCGGAACTAACGACAGAGAGTATGACGAAATAACTGGAGACAGTAATGAGGTTGACGATGATGGACAGGAAATTTCGGATCCCAATAAATCTAACGAGGGCGATACTGCAGATACTGGCGAATGTTACAATAAGGGCCTGCCCATGAAACTGGATCCTGACGATAGTAACGTAGAAGGAAATATTGGTGATGATGAATTCCCACACGTTGACTACTTGGATGAATTTGACGAAGAGATTGATTTTAAAGAGTACAAAAGCAGAGTTCTTCAAAGCAAATTTCTGGATGTGTGCTTTCCCGAAGGGATTAAGTGTCGCTTGTGTTCAGAAACGGTTGAAAATCACGTGAGTGTAGTAAAACACACGGTAGAACAGCACTGTGTGGAAGATTTTGCCTATCCCTGCATTATAGACAACGAATGCAAGTCCTTTAGCTCAGAGGAGGAATTAACGCTTCATTTAGTTTTCAAGCATTATGACTTGGATGCGCTAGTAATATATTGTAAGTGCCCGGAATGTGACAAGCGATTCAATGATTTCCCTTCCTTCAATAAGCATTCTTGCTACCAGAAAGCTGATGCTTCGAAAAAAAGAATTGATTGTGAACAATGTGGAAAAACATTCATATCCAACAAAAGATATCGATTTCACTTGCAATTCCATCTGGAGAAGCGACGTCCAAAAGCGTGTTTCATTTGCGACAAGCTTTTCAGAGATCAAGATGAATTCTTTGAGCATGTAATGTACAGCCATGATAAAATTAACGGACATCTTTGTTTACGTTGTGATCGAGTGTTCAGTGCAGCCAGCATTTACAAGCAACATCTGAATATTCACAAATCTAAACGGCCTTATGCTTGCATCTTATGCTCTAAGTCTTATATATATAAGCATTATTTGAATGATCATATGATTTCCAGTCATGGTGCAGAAAGTCCGTATAAATGTCATATTTGCGGGCAGTTTTTCGTGTCCGAGACAGTCCTTAATAATCATCTTCTGGCACACAATAAGCCTAAACCCACTGAAGTAATTTGCTGTAATACATGCGGTTTTGTAGCCGAAGACGAAAAAGAGGCCGAGAGCCATCTAGAAGGACATGGAAACGAAGATGTCCACACAATTACTGAAATAATTGACAGAGCATATGTCTGTGAATATTGTGAATTGGCATACAATTCTATTGAAAATCTTAATCAGCATCGGAATTCGCATATCAAAAAGGCATATTACTGCTGTGAATGCTCTGAATCATTTGAGGAGTACAAAGATTTTAGGAGTCATAAATTTTCACATCCAAACTATCCTGACAAAAGAAAAACTTTTCCAGTTACAAGACATTATGCATGTGATCTACCGGAATGTTCGAAAAGCTATTTACAACGCATAGGCTTAAAGGCCCATAAAAAACATCATCATTTAAAAAGAACACTGAAATGTCCAAAATGTAGGGAAAATTTTGATACAACGGAAGAATTTGAGAATCACATGATAAAAATCCATAATGGATTTGATTACAATTGCCAGTTCTGTGAGAAAACTTACTCAACGAAATTAGCTCTGAGTGTGCACATTTCCAGGAAACATTGTACAAATCAGTACAAGTGTGATTCATGTGACTACGGCTACCCAACAAAGGAACAACTAAATAGGCACAAATATTCAGTGCATCAAGAGTTGCCTTGTGAAATCTGCGGTGCAGTTTTAAAGAACTTCAGAAATTACCAACTTCACCTCAGAATTGTTCATGAGAAAGAGAAGAGGTTCTTTTGTAAATACTGTAACAAGGGGTTTTTCAAAAATTGCGATGTATTATCCCACGAACAAGCGGTACATCTGAAGGTGAAGAGGTACAAATGTGAGCTGTGTTCGTATCAAGCTGTGTACAAAGCGGCCTTTACCATACACATGAGGGCGCACCGCAATGAGAATCCGTTCGTCTGTAATATATGCGGTAGGAGTTTTCGAAAGAACTACTCACTAAAAGTGCACATAAAACGGCACAACAATATCAGAGATCACAAGTGTCCATATGAAGGTTGTGAATATGCGTACGCTGAAAAAACAAATCTTACACTACATATTCGGTTAAAACACGGTGAAGGTGGTTCATTAAATTCCAAATACGCAAAAAAGACTAACATCACACGTACCCGGTCCTTCTTTAATGTTCCCAAGTCGGATGTCTTTATTGACGACGATGATGGATTAGATTTCGGTTCAGACGAGGAACAGCCAAAAGCGAAAATGGCCAGAGAAAACTACACCGACGAAAGTAACACAGATGAGCCGAGTGAAACCGTCTTCAGAAATAACGATTCGTCACCAGCTGTAGTAGTTAAGAAAAATTACAGCGATCACGATTACATCCTTCATGATGGGAAAGTGGATGCCTACGGAGATGTTATAGAGGATTATGAAGTAGCCGAAGTTGAAGTAGAATCGAATTCGATTGATGAATAA
- Protein Sequence
- MYAGCPGRRSSLELELQKLLGICFDIDVKIRLNEIQALCEDCLNELIDTYDIIQRNEESGKPSSSNSELKDIKAEVESVSDSSDCEQISDDELHRIGEGGECSFFDKSQSSTGDELSNQSDLGSTKYGQQGTCAGTNDREYDEITGDSNEVDDDGQEISDPNKSNEGDTADTGECYNKGLPMKLDPDDSNVEGNIGDDEFPHVDYLDEFDEEIDFKEYKSRVLQSKFLDVCFPEGIKCRLCSETVENHVSVVKHTVEQHCVEDFAYPCIIDNECKSFSSEEELTLHLVFKHYDLDALVIYCKCPECDKRFNDFPSFNKHSCYQKADASKKRIDCEQCGKTFISNKRYRFHLQFHLEKRRPKACFICDKLFRDQDEFFEHVMYSHDKINGHLCLRCDRVFSAASIYKQHLNIHKSKRPYACILCSKSYIYKHYLNDHMISSHGAESPYKCHICGQFFVSETVLNNHLLAHNKPKPTEVICCNTCGFVAEDEKEAESHLEGHGNEDVHTITEIIDRAYVCEYCELAYNSIENLNQHRNSHIKKAYYCCECSESFEEYKDFRSHKFSHPNYPDKRKTFPVTRHYACDLPECSKSYLQRIGLKAHKKHHHLKRTLKCPKCRENFDTTEEFENHMIKIHNGFDYNCQFCEKTYSTKLALSVHISRKHCTNQYKCDSCDYGYPTKEQLNRHKYSVHQELPCEICGAVLKNFRNYQLHLRIVHEKEKRFFCKYCNKGFFKNCDVLSHEQAVHLKVKRYKCELCSYQAVYKAAFTIHMRAHRNENPFVCNICGRSFRKNYSLKVHIKRHNNIRDHKCPYEGCEYAYAEKTNLTLHIRLKHGEGGSLNSKYAKKTNITRTRSFFNVPKSDVFIDDDDGLDFGSDEEQPKAKMARENYTDESNTDEPSETVFRNNDSSPAVVVKKNYSDHDYILHDGKVDAYGDVIEDYEVAEVEVESNSIDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -