Basic Information

Insect: Dasypogon diadema
Gene Symbol: Ctcfl_1
Assembly: GCA_006980735.1
Location: jcf7180002955778:7334-20028[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0053 0.36 11.2 3.8 1 21 185 205 185 207 0.94

2 11 8.5e-06 0.00057 20.0 1.3 1 23 213 235 213 235 0.98

3 11 0.00027 0.018 15.2 3.0 1 23 241 264 241 264 0.96

4 11 0.021 1.4 9.3 3.5 1 21 270 290 270 292 0.95

5 11 0.00011 0.0076 16.4 1.9 1 23 298 320 298 320 0.99

6 11 1.3e-05 0.00086 19.4 1.2 1 23 326 348 326 348 0.98

7 11 0.00029 0.019 15.2 1.4 1 23 356 379 356 379 0.97

8 11 0.00073 0.049 13.9 3.6 2 23 386 407 385 407 0.97

9 11 0.00026 0.017 15.3 0.2 1 23 413 435 413 435 0.98

10 11 1.2e-06 8.1e-05 22.6 2.7 1 23 441 464 441 464 0.96

11 11 2.3e-07 1.5e-05 24.9 1.2 1 23 478 500 478 500 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0053	0.36	11.2	3.8	1	21	185	205	185	207	0.94
2	11	8.5e-06	0.00057	20.0	1.3	1	23	213	235	213	235	0.98
3	11	0.00027	0.018	15.2	3.0	1	23	241	264	241	264	0.96
4	11	0.021	1.4	9.3	3.5	1	21	270	290	270	292	0.95
5	11	0.00011	0.0076	16.4	1.9	1	23	298	320	298	320	0.99
6	11	1.3e-05	0.00086	19.4	1.2	1	23	326	348	326	348	0.98
7	11	0.00029	0.019	15.2	1.4	1	23	356	379	356	379	0.97
8	11	0.00073	0.049	13.9	3.6	2	23	386	407	385	407	0.97
9	11	0.00026	0.017	15.3	0.2	1	23	413	435	413	435	0.98
10	11	1.2e-06	8.1e-05	22.6	2.7	1	23	441	464	441	464	0.96
11	11	2.3e-07	1.5e-05	24.9	1.2	1	23	478	500	478	500	0.96

Sequence Information

Coding Sequence: ATGGCTAGTAAAGTAGCAGAGGTCACAGAGATCAAGGTTGAAAACACCAATGATCTTCAATCCTACTTAGAGTCCTTCAATAGAGAAATAGATGAGGGCAACGCTACAATTCAAGTACTGCAAGATGAAGATAGTGCTGATAATGATGAAGATGAAGGCGGAACGTATTTCGTTGATCAAGCTGGGAATTATTACTACCAAGCTACTAAAGATTCAGAACCTGTGCTTACGAATCCACCAGAAGACCTAGAGGAAGCCTCTGATGAGGATAATGTTAATGAAACTGAAGAATTTTTGGAAGATTCTGACAATGAGAGCGGAAAGGGTAAAAAAACCATTTCGGTGAGAACGAAATCAAAAGGTGAGGAAATAAGATATGTTCTTATAATGGATGATGAAACAAAAGCGGAAGAAACGAAGGAGGAGGTCTATGATTTTGATGACAAGGAAGAGGTAGAAACTAAACCGATTTCAAACAAGGAGGATGAGGTGCCTGCAAAGAAAATTATGAAATTGTTGACGAAAAAGGTAAACTCGTCATCAAATCAAGTTTTTGATTGCGCTTACTGCAACTACACAACGAGTAAAAGATATTTGTTAGCGCGACATATGAAATGCCACTCAGAAGATCGGCCACACAAATGTTCGGTGTGCGAAAGAGGATTTAAGACTGTGGCGTCTCTGCAGAATCATATTAACACCCATACAGGAAACAAGCCACATCGTTGCAAATTTTGTGAAAGTTCATTTACAACGTCAGGGGAATTAGTGCGGCACGTTAGGTATCGACATACCCATGAGAAGCCACATAAATGCACTGAATGTGATTACGCAAGCGTAGAGTTGAGCAAATTAAAGAGACATGTTCGATGCCATACCGGAGAGCGGCCCTACCAATGTCCGCACTGCACATATGCGTCCCCTGATACATTCAAGTTAAAGCGGCATTTAAGGATACACACCGGAGAGAAGCCTTATGAGTGTGATATATGTCATGCGCGCTTTACGCAATCCAATTCCCTTAAAGCCCACAAGCTGATACACAGCGTAGGCGAGAAGCCAGTATTCCAGTGTGAGTTATGCCCTACAACATGCGGGCGAAAAACAGATTTGCGAATCCATGTCCAAAAGTTGCACACTTCGGATAAGCCATTAAGATGTAAAAGGTGCGGTCAACATTTTCCTGACAGATACAGTTATAAGGTTCATTCGAAAACACACGAGGGCGAGAAGTGTTACAAATGTGAACTCTGCCCATACGCTTCAATTTCTGCCCGCCATTTAGAATCTCACATCCTCATACACACGGACCAAAAACCGTACGAATGCAACCATTGCGATCAAGCATTCAGACAAAAACAGCTCCTAAAACGGCACATTAATTTGTACCACAACAGGGACTATGTGCCTCCAGTACCAAAGGAAAAGACCCATGTTTGCCCCGACTGTTCGCGAGCTTTTAGTCACAAAGGCAACCTTATCCGACATATGGCCTTACATGATCCAGATTCAGGAGCTAAGGAGCAGCAAGCTGCTTTAAAAATGGGTCGGCAAAAACGCATTCAAGTCATCGATGGACAGGCCGTCGAAATTAGCCCTAGTATGGACGAAGATGAAGGGATGCAAGAAGATGACGTCTATGACGAATCAAGTAGTCAAACAATGACGGAAATTAAAGAGGAAAAGGAAATGGTTACGTTGGAAGAAGGTAGTGATGGTCAGCAATATGTTGTGCTTGAAGTTATTCAAGTTGAAGATGGACCTGGGACTTCGGGAAATGGTGCCGAAAATGTAGAGGTTGCTGAAGAAAGTTATATTATGGATTTACCAAGTGATGTAATAGATACCCTAAGAACTAGTAAAAAGTTACGAACCGAACCAGAGCACATCCTTAGTGATGACAGGGATATGGACAATTGTTTTGGTTTTGAGGAAGAAGATGATGAAAATGAGGAAGAAAGAGATGAAGATAAGTCAACAATAAAACTACTTGAAATACGAGAATAA
Protein Sequence: MASKVAEVTEIKVENTNDLQSYLESFNREIDEGNATIQVLQDEDSADNDEDEGGTYFVDQAGNYYYQATKDSEPVLTNPPEDLEEASDEDNVNETEEFLEDSDNESGKGKKTISVRTKSKGEEIRYVLIMDDETKAEETKEEVYDFDDKEEVETKPISNKEDEVPAKKIMKLLTKKVNSSSNQVFDCAYCNYTTSKRYLLARHMKCHSEDRPHKCSVCERGFKTVASLQNHINTHTGNKPHRCKFCESSFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSVGEKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLRCKRCGQHFPDRYSYKVHSKTHEGEKCYKCELCPYASISARHLESHILIHTDQKPYECNHCDQAFRQKQLLKRHINLYHNRDYVPPVPKEKTHVCPDCSRAFSHKGNLIRHMALHDPDSGAKEQQAALKMGRQKRIQVIDGQAVEISPSMDEDEGMQEDDVYDESSSQTMTEIKEEKEMVTLEEGSDGQQYVVLEVIQVEDGPGTSGNGAENVEVAEESYIMDLPSDVIDTLRTSKKLRTEPEHILSDDRDMDNCFGFEEEDDENEEERDEDKSTIKLLEIRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -