Ddia000964.1
Basic Information
- Insect
- Dasypogon diadema
- Gene Symbol
- -
- Assembly
- GCA_006980735.1
- Location
- jcf7180002942721:20936-24733[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0033 0.22 11.8 2.3 1 23 71 93 71 93 0.94 2 16 0.0034 0.23 11.8 2.6 1 23 99 122 99 122 0.92 3 16 0.63 43 4.6 1.6 1 23 125 148 125 148 0.93 4 16 0.015 1 9.7 0.6 3 22 158 177 156 177 0.92 5 16 0.0013 0.085 13.1 1.2 1 23 185 207 185 207 0.98 6 16 6.8e-05 0.0046 17.1 3.4 1 23 213 235 213 235 0.97 7 16 6.5e-05 0.0044 17.2 0.5 1 23 241 263 241 263 0.95 8 16 0.1 6.9 7.1 0.5 1 22 269 290 269 290 0.95 9 16 0.00027 0.018 15.3 2.8 1 23 492 515 492 515 0.97 10 16 3 2e+02 2.5 5.4 2 21 536 555 535 557 0.89 11 16 5.3e-05 0.0036 17.5 0.0 2 23 593 615 592 615 0.95 12 16 8.3e-05 0.0056 16.9 0.3 2 21 628 647 628 648 0.93 13 16 0.00014 0.0096 16.1 5.4 1 23 656 678 656 678 0.97 14 16 5.9e-07 4e-05 23.6 1.1 1 23 684 706 684 706 0.96 15 16 2.4e-06 0.00016 21.7 0.1 1 23 712 734 712 734 0.98 16 16 0.023 1.6 9.2 3.2 1 21 740 760 740 761 0.94
Sequence Information
- Coding Sequence
- ATGTTGTCTGAAAATTATGCAAATTGGAGTGATTCAGAAGCATCTGATGAGGAGAGTCCAACAAAAAATTTCAATAACTGCGAAAGGCGGTGTAAATATTGCATAAAACTCGTTAAAAAGGCATCTGATCTGCCGGAGCATGAGAAAAAATGTTCAGTAGCCCTAAAAACCACTGCCGATTTGGTGACTTGCAAGGATGGGACTAAGAGATTCCTCTGCGACATTTGCTTTCGATTCTTTAAGTATCTAACAGGGCTCACCAAGCACAAGAAATGGCATGAACCTCCAGGAGGATACATGTGTCGATACTGTGACGCCAAGTACTGCACTTCTCAAGAGCTGGAAAAACATAAAGAGGAGAGCCATCAGGTCTACAAATGTCAGATATGCAAACGAATCCATGAGACCCTTCAAAGCTACTTGGATCACATCAAACTGGAACACAACGGCTTGGATCGGGTCTGGGTGCATTGTGATGACTGCGGATTGAACTTCAAATCCCAGTCGATCTTGAGCTACCACAAAAGGACAAAATGTGGTACGCTGAAACCCTTTAAATGCGACGAATGCGGATCCCACTATCAAACTCAGGCCACTCTAAACATTCACAAATTAATACACAAAGGGGAGAAGTCGTTTTGTTGTAGCTACTGTGGGAAAAGTTTCCTTAGTAAGGGACAACTAACGGTTCACGAGCGGAAACATACCGGTGAGAAGCCCTATAAATGCGAGCTGTGCCCTAAAGCGTTTTCGTATCGTGAAAGTTTGGTCACACATTCATCACTCCACACCGGAATTAAACCTTACATCTGTGGGGCTTGCGATGCACGTTTCTCTTGTGTGGGAAATCTACAAAAGCATCGTCGCACACGTCCGAATAGTTGTGGTCTTCCACAGTTTTGTATTAATAAAAAAGCAGCCCCAAGAGCCAGTAGTCGAAAAGAATCTTCTAAACTAGATTTCGAAGAAACGGTAAACTGTTTCGTGGTTACGGCTGATAATGAATTCCAAGTGATTCCGATGAGGCAAGAGAAAGACGAAGAAATAAATCAGGAAGATCCCTTCAAAAAGGATGCTTGGATTACAGAAGAAGCTGAACTTAAAACGAAAGACAAAGGTTCAGCTACAGATGCACAGGAGTCATATCAAGATAATGACATGGACTCCACAAGCTATGATCAATATAACACAGAAACAGAGACATATAACGAAGAGGAAATGATGCTAGTCATTATGAAGGACGATAGCGCAGATGATGACGAAGATGATTTACCATTGTCGGTGATCAAATCGTCGACTGAAAATATTCAGAGCGACGACAAGGTCACCGAAGAAAAGGTTGATTCGGATCCTCTGAACACCACTACAAACAACGTTCGAGATGAACCTACGTGCACCGGAGATACAGAACCAGATGCTTCGGATGATGACCTAGAAAACTTCAAATCGAACAACCTTTCCACCGGGGACCCGTACGAATGCCATATTTGTCCCAAAGTCTACCAGCATAGGAAGCCTCTATTGAAACATTTGAAAAATGTTCATCGCATCGACAGACAAGAGACGGCTGTCTGCCCACCTAATCCGAAAAGCAACGGCTCTCATATTTGCATCTATTGCAAGAGATCCTACAAAAAACTAAAGTTTCTGGAGAATCACATAAAGTGTCACGGACCCGAGGGTAAACTGATCCATAAAAGTGTTTGCTGCAGCCGCTACTTTGCAACTGAGGAAGATGCTGCGAAACACGATCGAAATTGTCACAGTGAAAAAATTACTTGTCCCCTTTGCGGTAAAATTTATGCCAATCCTGAAAAATTAGCAGCACACAAACGATACGCCCACACATCACAAGCGAATAAAGTGAAGAAGAAAAGTAACGTTTGCCAGAAGTGCGGAAAAAGGTTCGTGAGTAAAACTGCTCTAACAGATCACGAGAGATCAGATTGTGGCAAGTCACCACTGTATAAATGTGAGAATTGCGGGAAGCATTTTCACAGTTCAGGATCACTGAAAACGCACAAAACTGTTCATACCGGAGAACTGCCGTACTTGTGTACCTATTGCGGGAAGGCGTTTCGAACTTCTGGACAGGTTAAAGTACATCAAAGGAAACACAGTGGAGAGAAACCTTTCAAATGTGATATATGCCCGAAAGCGTTTGCTTACAGAGAAAGTCTTATTACGCACATTTCCATCCACACTGGTGAAAGGCGGTTTAAGTGTGAAGGTTGCGATCGGAGATTTTCATGCATTTCAAATCTTTTAATGCATCGGAAACATAATTTAGCGACTTGTGGACTGATCCCCAGTAGTACGAAGCCGGATTCAGAGCCTGTCGGTGTGGCTCGTGGAGTTTTGTACTTTGGTGAAAAGCCAAAGTGA
- Protein Sequence
- MLSENYANWSDSEASDEESPTKNFNNCERRCKYCIKLVKKASDLPEHEKKCSVALKTTADLVTCKDGTKRFLCDICFRFFKYLTGLTKHKKWHEPPGGYMCRYCDAKYCTSQELEKHKEESHQVYKCQICKRIHETLQSYLDHIKLEHNGLDRVWVHCDDCGLNFKSQSILSYHKRTKCGTLKPFKCDECGSHYQTQATLNIHKLIHKGEKSFCCSYCGKSFLSKGQLTVHERKHTGEKPYKCELCPKAFSYRESLVTHSSLHTGIKPYICGACDARFSCVGNLQKHRRTRPNSCGLPQFCINKKAAPRASSRKESSKLDFEETVNCFVVTADNEFQVIPMRQEKDEEINQEDPFKKDAWITEEAELKTKDKGSATDAQESYQDNDMDSTSYDQYNTETETYNEEEMMLVIMKDDSADDDEDDLPLSVIKSSTENIQSDDKVTEEKVDSDPLNTTTNNVRDEPTCTGDTEPDASDDDLENFKSNNLSTGDPYECHICPKVYQHRKPLLKHLKNVHRIDRQETAVCPPNPKSNGSHICIYCKRSYKKLKFLENHIKCHGPEGKLIHKSVCCSRYFATEEDAAKHDRNCHSEKITCPLCGKIYANPEKLAAHKRYAHTSQANKVKKKSNVCQKCGKRFVSKTALTDHERSDCGKSPLYKCENCGKHFHSSGSLKTHKTVHTGELPYLCTYCGKAFRTSGQVKVHQRKHSGEKPFKCDICPKAFAYRESLITHISIHTGERRFKCEGCDRRFSCISNLLMHRKHNLATCGLIPSSTKPDSEPVGVARGVLYFGEKPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -