Ddia005799.1
Basic Information
- Insect
- Dasypogon diadema
- Gene Symbol
- -
- Assembly
- GCA_006980735.1
- Location
- jcf7180002951210:10745-22026[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.099 6.7 7.2 7.6 1 23 234 256 234 256 0.98 2 19 0.0069 0.46 10.8 0.8 1 23 297 319 297 319 0.97 3 19 1.6e-06 0.00011 22.2 1.0 1 23 325 347 325 347 0.97 4 19 0.00023 0.016 15.4 0.1 1 23 353 375 353 375 0.99 5 19 1e-05 0.00068 19.7 1.6 1 23 381 403 381 403 0.98 6 19 0.054 3.6 8.0 5.6 1 23 409 432 409 432 0.96 7 19 0.21 14 6.1 2.5 2 23 439 461 438 461 0.95 8 19 0.00099 0.067 13.5 5.5 1 23 518 540 518 540 0.97 9 19 0.00035 0.024 14.9 0.4 2 23 547 568 546 568 0.96 10 19 5.2e-05 0.0035 17.5 0.1 1 23 574 596 574 596 0.99 11 19 0.0047 0.32 11.3 4.6 1 20 602 621 602 624 0.94 12 19 0.0069 0.47 10.8 0.5 1 23 630 653 630 653 0.96 13 19 2.4 1.6e+02 2.8 5.4 2 23 662 684 661 684 0.96 14 19 1.5e-05 0.001 19.2 0.6 1 23 781 803 781 803 0.98 15 19 1.8e-05 0.0012 18.9 1.6 1 23 809 831 809 831 0.98 16 19 0.0048 0.33 11.3 0.1 2 23 838 859 837 859 0.97 17 19 3.1e-05 0.0021 18.2 1.8 1 23 865 887 865 887 0.98 18 19 0.01 0.67 10.3 0.9 1 23 893 916 893 916 0.96 19 19 9.3e-05 0.0063 16.7 0.9 2 23 923 945 923 945 0.95
Sequence Information
- Coding Sequence
- ATGGGAGATATGTGTAGAATTTGCATGACTGCAAAAAAGGAACTAGTAAGATTAATAAATGAAAGCACAAATAAACTGGAACGCAGTGGCGAGAAGTTCGAGGATTGCTTTGGTATTAAGATCAATGAAATACCATATTGCCAGAAAATATGTAGAAATTGTGAGCTGCAGCTTATAGATTTTTTCTACTTCAAACAGCAAGCCGTAAGATCACACAATTACCTCTTGGATAAGGGTCCTGATATACAAGTTGAAGTGCTTAAAATAAAAGAGGAGGAACCAGATCCTGAGATCTCAGGCGATGATGATGATAATTCGTCCAATGTTGAGTTTTTCAATCTGGAGTACCTTGATGAGGAGGCGGTACACGTAGAAATGTTAAATTTTCCACTGCCCAAAATCGAGGGTCAGTCAAGTGTTGGCAGTGCAGAAATAAAAGAAGAGCTCATTGAAGATGAGAATTCCATGGAGAATCCAGTCAGTGAAAATTTCGATGATGATACTGGTTTAGAAAATGAAAGTCATTTGGATTTGTTAGCCGATTTGGGTTTAGAGAGTCAGGATGAGAGTGTAGCAATTAGTGGAAATAATGAAGATGAGAAAGAAGAGTCTTATGATAGCGACAAGGATCAGATTGGAGAGAAACCGGCCAAACGAAAGATTAAATTCTTCAAAAGATCTATAGGAAGTGTATACAGGCACAGATGCAATCAGTGTAATCATAACTTCAAAAGTGATAAAAAATACAAAGATCATCTTAAGATCCATATGGAAGAGGATGGGTTAAACACTGCAGAAAGATCGCATGATAAATCCAGAAGATCCAGACCTAATGTACTCCGTGTGGACGGGAAAATAAAATATTTCAAAAATTCACAACATTTTAAGTATAATTGCGAAGAATGTGGTAAAAATTTCCTTTACGAATTTTCATATCAGGCTCATAAAAACGTTCACAAGGGACTACCTCCGTTTAATTGTGAGATATGTGGTAAAGGATTTAAACAGAAAGTTAATTATATTTATCACATGAAAAATCATTATGGGGAGAGAAATTTCAAATGTGACCTTTGCGGAAAAGCATTCTTAGTCCAGTGGGATTTAGATTTACATATGCGATCCCATACAGACGCTAGGCCTTTCATGTGTGATATCTGTGGCAAAGGATTTCGTATTAGTAATCATCTAACAAATCACCGTGAAACACATAATGAAACAAATATCTATGAATGCCATTTGTGCCCAACCAAACTGCACACCAGGGTCACATTAAAAAGGCATTTAGCAAGTTGTCATAAAATCGGTAATTTGAAGCAATGTCCGTTTTGTCAAAGGCAATTTGCTCGATTAGATCGATTTAAGTTCCACATACAAAAATTTCATGGAGTGCTTCTCACATTAGCATCGGATACTTTACCTAAAGATGACAATTTTATCGATGTTGTGAATACATGTCCTCAACCCATGGAAAACACGTCAGCGATTAGTGTTGCGAAGGATTGGAAGGACACAAAAAAAGCGAAAAGATGGAAGACTCCAGAAAAATATAAATTTCGCTGTGAACAGTGTCACAAACCCTTCCATAGAGAAGACTCTTTTAAGGCTCACCTGAATTTTCACAATGGAATTATACCTTGGGAATGCGAAATTTGTGGCAAAAGGTTTAAGGGCAGAGGCAGATATATGTATCACATAAAAAATCACTACGGTCAGCGAGATTACAAATGCGACATTTGCGATAAAGCATTTCTAATCGAATGGGACCTTCGTATTCATATGCGTACACACTCTAGTGATCGCCCTTATATTTGCGAAACTTGTGGGAAGACCTTCCGAATGTATTGTAATTTAGCCAATCATCGTGAGTGTCACAATGAAAAAAATAAATACGAATGCGAGATATGCCAAGCGAAATTGCATACTACCGTTACTCTCCGGCGACATATGGATATCGTGCATAAAGTGGATTTGACCATTTCCAAAACGTGTCGTTTCTGTAATCAAAATTTTACCCTACTGCGACGTTATGAGGAACATATGAAAAGATGTCATCCAGATATTGAAACTCTTGAGGATTCTCTTTATAACACCTTAAAATCAATAATAAATCAGTACAAAACAAAAGTTCGAAACACAAGTGTGGGGAATGTGGTGAAATTTTTGGACTTTATAAACACTACAGCCAACACATTAGGATACATCGGAAGGCTTTACAAACGTGAATACGATGGTAATTCAATTGGAAAGGAAAGGAAAAGAAAATGCATTGACGACGACGACAAATTGTTTAATCCACAAATAAAACGTAAAAAGAAGAAAAAGCCTCCACAGAAATATGATTATCGTTGTGAATATTGTAAAAAACCTTTTATGTCGGAGGATTCTTATCAAGCCCATTTGAGAGCACACATGGGTCTTCCACGTTATAGCTGTGATATTTGCGGTAAAGGTTTTAAGGAAAAAAATAAATTTGAATATCACATGAAAAATCACAAGGGTGAACGTGATTGGAAATGTTCTGTTTGTGAGAAAGCTTTCCTTATTGAATGGGATCTAGAGTTACATATGCGAACTCATACCGATTACAGACCGTATGTTTGCGAAATTTGTGGTAAAGCATTTCGTGTTATCTGCCATTTAACAGAACATCGTGAAACACATAATGATACCAATACTTTTGAATGTACAATATGTGGTTCCAAATTACATACTAGAAAAACTCTTAGGGGACACATGGCGAGTGCGCATAGAATGGGAAAAATCAGATATTGCCCTGTGTGCGATCAATCGTTTGTAAGAAATCATCGACTGAAGGATCACATAGCTCGATATCACTCCGAAATATCATTAGGCACATAG
- Protein Sequence
- MGDMCRICMTAKKELVRLINESTNKLERSGEKFEDCFGIKINEIPYCQKICRNCELQLIDFFYFKQQAVRSHNYLLDKGPDIQVEVLKIKEEEPDPEISGDDDDNSSNVEFFNLEYLDEEAVHVEMLNFPLPKIEGQSSVGSAEIKEELIEDENSMENPVSENFDDDTGLENESHLDLLADLGLESQDESVAISGNNEDEKEESYDSDKDQIGEKPAKRKIKFFKRSIGSVYRHRCNQCNHNFKSDKKYKDHLKIHMEEDGLNTAERSHDKSRRSRPNVLRVDGKIKYFKNSQHFKYNCEECGKNFLYEFSYQAHKNVHKGLPPFNCEICGKGFKQKVNYIYHMKNHYGERNFKCDLCGKAFLVQWDLDLHMRSHTDARPFMCDICGKGFRISNHLTNHRETHNETNIYECHLCPTKLHTRVTLKRHLASCHKIGNLKQCPFCQRQFARLDRFKFHIQKFHGVLLTLASDTLPKDDNFIDVVNTCPQPMENTSAISVAKDWKDTKKAKRWKTPEKYKFRCEQCHKPFHREDSFKAHLNFHNGIIPWECEICGKRFKGRGRYMYHIKNHYGQRDYKCDICDKAFLIEWDLRIHMRTHSSDRPYICETCGKTFRMYCNLANHRECHNEKNKYECEICQAKLHTTVTLRRHMDIVHKVDLTISKTCRFCNQNFTLLRRYEEHMKRCHPDIETLEDSLYNTLKSIINQYKTKVRNTSVGNVVKFLDFINTTANTLGYIGRLYKREYDGNSIGKERKRKCIDDDDKLFNPQIKRKKKKKPPQKYDYRCEYCKKPFMSEDSYQAHLRAHMGLPRYSCDICGKGFKEKNKFEYHMKNHKGERDWKCSVCEKAFLIEWDLELHMRTHTDYRPYVCEICGKAFRVICHLTEHRETHNDTNTFECTICGSKLHTRKTLRGHMASAHRMGKIRYCPVCDQSFVRNHRLKDHIARYHSEISLGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -