Basic Information

Insect: Dasypogon diadema
Gene Symbol: -
Assembly: GCA_006980735.1
Location: jcf7180002941989:12679-15770[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0001 0.0067 16.6 0.1 1 23 331 354 331 354 0.93

2 12 0.00015 0.01 16.1 2.3 1 23 362 384 362 384 0.98

3 12 5.1e-05 0.0035 17.5 1.0 1 23 391 413 391 413 0.95

4 12 2.7e-07 1.8e-05 24.7 1.0 1 23 419 441 419 441 0.99

5 12 2.8e-06 0.00019 21.5 1.0 1 23 448 470 448 470 0.99

6 12 2.4e-05 0.0016 18.6 0.4 1 23 476 498 476 498 0.95

7 12 3.3e-05 0.0022 18.1 0.3 1 23 504 526 504 526 0.98

8 12 2.7e-06 0.00018 21.5 0.6 1 23 532 555 532 555 0.95

9 12 2.4e-05 0.0016 18.6 2.0 1 23 561 584 561 584 0.97

10 12 1.4e-05 0.00096 19.3 2.1 1 23 590 612 590 612 0.99

11 12 1.7e-05 0.0011 19.0 0.5 1 23 618 640 618 640 0.96

12 12 0.00073 0.049 13.9 0.2 1 22 646 667 646 670 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0001	0.0067	16.6	0.1	1	23	331	354	331	354	0.93
2	12	0.00015	0.01	16.1	2.3	1	23	362	384	362	384	0.98
3	12	5.1e-05	0.0035	17.5	1.0	1	23	391	413	391	413	0.95
4	12	2.7e-07	1.8e-05	24.7	1.0	1	23	419	441	419	441	0.99
5	12	2.8e-06	0.00019	21.5	1.0	1	23	448	470	448	470	0.99
6	12	2.4e-05	0.0016	18.6	0.4	1	23	476	498	476	498	0.95
7	12	3.3e-05	0.0022	18.1	0.3	1	23	504	526	504	526	0.98
8	12	2.7e-06	0.00018	21.5	0.6	1	23	532	555	532	555	0.95
9	12	2.4e-05	0.0016	18.6	2.0	1	23	561	584	561	584	0.97
10	12	1.4e-05	0.00096	19.3	2.1	1	23	590	612	590	612	0.99
11	12	1.7e-05	0.0011	19.0	0.5	1	23	618	640	618	640	0.96
12	12	0.00073	0.049	13.9	0.2	1	22	646	667	646	670	0.92

Sequence Information

Coding Sequence: ATGAGTGAACTTCTCAGGGAGGTTCAGATATGTGCGGAAAGCACCAAGTGTTATCTATGCGATGGGTCTTTTAACGAGGGCGATCAGCCGCTTTTGCTGTTTGAAAAACGACTGCAAGAAAATGGGGAGATTGACTGCCCCATGTCAGTCATTCTCTCGTCTATTTTGGGCAGAACGCTGGACGAGAACACCGCGCATTCAAAGGTAATTTGCGAAGGCTGCCACCTACTCATCCAAGAATTCGAGGTGACCGAACAGAGGTACCTCGATCTCAAGTACAAAATAATCCACGATTTCAACAGAACAGCCAGGCGTCACGGCGAGGAGGTGGTTCCTTTAGAGGCGGAAGACGATGAGGAGGAGTACACTATAACTCTAGATGACCAGACATTCGCTAACGAACATTCCGAAAGTGGTTTCCAAGATGTGGAGAAGGTGCCGGAGCAGGACTCGGTGGAGCTTATAAACATTCTTAATAGTGCTGAGATGGACCAGAATTTCGTCGAGGACTCGAAGGCGGACTCGAACGTTGTTCAGTTTGACGGTAAAATTGAGTCCGAGGAGTATTATGAGGATAACACGGACAACATGGTGGAGGTGATTTCGGAGGATGTTCATTATGAGCAAATAATAGAACATCGCCCCCATCCCAGTAACGAAGACAGTACCAGCGCTACAGAGCAACTCTCCAGCAACATAACCACAGCGCAGTCCGGAGGGGAAAGTAACGATGCATCCACGTGTTCCAATGTCGTAGTGAAGTCTGAAGATTTTTCGGGGGAAGATCAGAACTCCGTGGAGTCTTCGACTGTGGACAGTGGGAAGCGGCGCAAGAAGACGGAAAAGCTAATTGACCAAAAGCCTGTTTTCGAGTGCAGGGACGACAAGTACTACTGCATCGTGTGCCCAAAGTTGGGAGCTGACGAGAACTCTGAGTTTGATATACGCACGATTGCCGTACACCTCAAGAGCCAGCACAACATTCGCGTGTACATTTGTGACATTTGCGGGGAAGACTTCCGCAAGAGGATCGAACTAACCGAGCACATGGATGACGATCACGGAGGCACGGAAGACGGCGAGTTCCAGTGCGAGACTTGCAACAGAATATTTACGAATTTACGCCTGTTCCGCATCCACAAGCGCCTTCACTACACATCTTCGAAGCAATTCCTCTGTGTGCAATGCAACAAGAAGTACAGCTCCAAGAACTTGCTCGAGGAGCACATGAACATGCACACGGGGCGGCGGCCCTACAAGTGTAACTACTGCCCAAAGGATTTTGCCTCCAAGTACACATTGACGGCGCATTTGAAGATTCACACGGATCGACCCCGTCCATTTACGTGCAGTCAGTGTCCGAAGGCATTTTTCAGCGCCCAAAACCTGCAGCAACACGTCAAAACCCACTCGGGCGTTAAGAATTTCATCTGCGACGTGTGCAATAAGGCCTTCGGCACCCAGCACAACCTGGAGGTCCACAAAGTGGTGCACACAGGCTACAAGCCGTTCATCTGCCGCACCTGCGGGAAGGCCTTCGCTCGCCGAGCTGAGATCAAGGACCACGAGAGGACGCACACGGGCGAGAAACCGTTCGCCTGCGACATCTGCAACATGTCGTTTGCTCAGCGATCGAATCTGACCACTCACAAGAGAGCAACGCACTTCAATGACAAGAGGTACAAGTGCGATCGGTGCGACCGGTCCTTCAAAAGGCGGAGGCTGTTGGACTACCACATCCGGGCCACGCACACGGGCGAAAGACCGTACAAGTGCGAAATGTGCAGCGCTACTTTTGTCTACCCCGAGCACTACAAGAAACACCTCAGGATTCACACTGGGGTCAAGCCGTACGCGTGCGAGGTGTGCGGCAAAACGTTCAACAGTCGGGACAACCGCAACGCGCATCGCTTCATTCACAGCGACAAAAAACCGTACGAGTGCCTTGTCTGCGGCCAGGGTTTCATGAGGAAGCCTCTGCTCTACACACACATGCAGCAATCTGGGCATCTTAATGACACCATCGTGGTGAACCAGCCCAGAGTGTCCGATACCGAGATCAGTAAAGAGGACGCAAGCGACAACTACATCGACGGGAACATTACAGAGGACAGCGAGATGGTCGAGGAGCACCTCATCATAGACGGGCCCGTGCAGTTGTCCGCAAGCTCTGAGAACCAAATAATCGACGAAACCAGCGAAGTGCCAAGCGAGATTCTGGCTACAGACCTCGCCGAGGTTATAACTCCCGATCAGATTTTGGTAGCGGACGAAGGGCAGTACATCAAGAACGAGGACGGCACGTTTCAGATGGTGCAGATTAGGACTAAGGACGAGAATGGCAAGGAGCGGTTCGCCTGGGTAAATTTAGTCTCTGAAAAGGAAAACTAG
Protein Sequence: MSELLREVQICAESTKCYLCDGSFNEGDQPLLLFEKRLQENGEIDCPMSVILSSILGRTLDENTAHSKVICEGCHLLIQEFEVTEQRYLDLKYKIIHDFNRTARRHGEEVVPLEAEDDEEEYTITLDDQTFANEHSESGFQDVEKVPEQDSVELINILNSAEMDQNFVEDSKADSNVVQFDGKIESEEYYEDNTDNMVEVISEDVHYEQIIEHRPHPSNEDSTSATEQLSSNITTAQSGGESNDASTCSNVVVKSEDFSGEDQNSVESSTVDSGKRRKKTEKLIDQKPVFECRDDKYYCIVCPKLGADENSEFDIRTIAVHLKSQHNIRVYICDICGEDFRKRIELTEHMDDDHGGTEDGEFQCETCNRIFTNLRLFRIHKRLHYTSSKQFLCVQCNKKYSSKNLLEEHMNMHTGRRPYKCNYCPKDFASKYTLTAHLKIHTDRPRPFTCSQCPKAFFSAQNLQQHVKTHSGVKNFICDVCNKAFGTQHNLEVHKVVHTGYKPFICRTCGKAFARRAEIKDHERTHTGEKPFACDICNMSFAQRSNLTTHKRATHFNDKRYKCDRCDRSFKRRRLLDYHIRATHTGERPYKCEMCSATFVYPEHYKKHLRIHTGVKPYACEVCGKTFNSRDNRNAHRFIHSDKKPYECLVCGQGFMRKPLLYTHMQQSGHLNDTIVVNQPRVSDTEISKEDASDNYIDGNITEDSEMVEEHLIIDGPVQLSASSENQIIDETSEVPSEILATDLAEVITPDQILVADEGQYIKNEDGTFQMVQIRTKDENGKERFAWVNLVSEKEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00455363;
90% Identity: -
80% Identity: -