Basic Information

Insect: Dasypogon diadema
Gene Symbol: -
Assembly: GCA_006980735.1
Location: jcf7180002948965:5378-8629[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.019 1.3 9.4 1.9 1 23 75 98 75 98 0.92

2 17 0.00086 0.058 13.7 2.2 1 23 104 126 104 126 0.99

3 17 7.1e-05 0.0048 17.1 0.1 2 23 132 153 132 153 0.98

4 17 0.0014 0.097 12.9 1.3 1 23 159 182 159 182 0.98

5 17 1.8e-05 0.0012 18.9 0.2 1 23 209 231 209 231 0.93

6 17 4e-06 0.00027 21.0 1.5 1 23 237 259 237 259 0.98

7 17 7.1e-07 4.8e-05 23.4 1.0 1 23 265 288 265 288 0.97

8 17 0.00041 0.027 14.7 2.1 1 23 298 321 298 321 0.95

9 17 0.0004 0.027 14.7 3.2 2 23 435 456 434 456 0.97

10 17 4.2e-07 2.9e-05 24.1 0.6 1 23 462 484 462 484 0.97

11 17 0.0094 0.63 10.4 5.0 1 23 495 517 495 517 0.95

12 17 0.00019 0.013 15.7 3.1 1 23 593 615 593 615 0.98

13 17 0.02 1.4 9.3 2.2 1 14 638 651 638 661 0.84

14 17 4.1e-06 0.00028 21.0 3.8 1 23 835 857 835 857 0.98

15 17 0.13 8.6 6.8 1.2 1 23 863 885 863 885 0.81

16 17 8.8e-05 0.0059 16.8 0.3 1 23 892 914 892 914 0.97

17 17 3.3e-06 0.00022 21.3 2.3 1 23 920 942 920 942 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.019	1.3	9.4	1.9	1	23	75	98	75	98	0.92
2	17	0.00086	0.058	13.7	2.2	1	23	104	126	104	126	0.99
3	17	7.1e-05	0.0048	17.1	0.1	2	23	132	153	132	153	0.98
4	17	0.0014	0.097	12.9	1.3	1	23	159	182	159	182	0.98
5	17	1.8e-05	0.0012	18.9	0.2	1	23	209	231	209	231	0.93
6	17	4e-06	0.00027	21.0	1.5	1	23	237	259	237	259	0.98
7	17	7.1e-07	4.8e-05	23.4	1.0	1	23	265	288	265	288	0.97
8	17	0.00041	0.027	14.7	2.1	1	23	298	321	298	321	0.95
9	17	0.0004	0.027	14.7	3.2	2	23	435	456	434	456	0.97
10	17	4.2e-07	2.9e-05	24.1	0.6	1	23	462	484	462	484	0.97
11	17	0.0094	0.63	10.4	5.0	1	23	495	517	495	517	0.95
12	17	0.00019	0.013	15.7	3.1	1	23	593	615	593	615	0.98
13	17	0.02	1.4	9.3	2.2	1	14	638	651	638	661	0.84
14	17	4.1e-06	0.00028	21.0	3.8	1	23	835	857	835	857	0.98
15	17	0.13	8.6	6.8	1.2	1	23	863	885	863	885	0.81
16	17	8.8e-05	0.0059	16.8	0.3	1	23	892	914	892	914	0.97
17	17	3.3e-06	0.00022	21.3	2.3	1	23	920	942	920	942	0.99

Sequence Information

Coding Sequence: GAAGTTGATAATGAGTTCCTCACTGCAAATAACTTCGCCGTCCTAAATTTAGACAATGAAGAAGTTGCTGACCCAGACAATATATTCAATTTCAACTCAGATCCCTGTGATCAGTTGGAAAATGAAGTTCCCAAAACTCAAGATAGTCCAAAAGAAATTATTAATCGGCCAAAAGCAGCAAAACGAAAGAGAAATAAACAAAAAAGTCATGTCTTGAAATCGTTTTGTTGCGATTTATGTGATAATGAATTTCCCAATTTGAGGCAATTAAAAGTTCATAAGAGCCTAAATCATATTCTGACCAAGTTTTATAAATGTCAGGAATGTTTTAAAGATTTCAATTTCGAAAAGAACTTTATGCTGCACTTGGCTACTCACACCGCTGCTCCGGCCAAATGTCCAGAGTGTGGAAAGATTTTTCAAAGAATTTCCAGTTTTATTGGTCATATTGAGACTCATATGGATGATGATAACTTCAAATGCAAAAACTGTGATCTGGAGTTCGAATTTGAAGAATACTACGACAGGCATATGCAAAAAGTGCATAAGGAAGCAAAGGTGCTGCCCGCAGATTTGATTAGAAAGAGAAACAGAAACACTTCCTCGAATAAGAATTCCGGGAAATATCTGTGCAAAATTTGTGGTAAAAGTTTTCCGAAGTTAAGTCTACTTGTTCGGCATGAATTGGGCCATACAAAAACCAAACCCTTTGAATGCTTAGAATGTTCCCAAAGGTTTAGCCAAAAATCCTCCCTACAGCGGCACTATTTAGTGCATGAAGGAATCAAGCCATTCAACTGTCCAGAGTGCAATTTGAGATTTTCACAGCGTACAAATCTCATCACTCATATGAAACGTGTTCACCCAGCCAAAGAAGACTTAGGTAATAAATTTCAGTGCAACAACTGTCCATGCGCCTTCAACAAACTCAACAGCCTCAACCGACACATCACACTGATGCACTCCAAGGTTGCTAAAGACGCAGATAAAAATCTCTCTATCAATGAACTACTGGAGCAAATCAAATGGCTTCAAGATGATCCATCGGAGCAGAGATTGGGAGACAATAGTGCCATCCAAGAACCAATTCATAATACTTTACAGACAACCACGCAACACTACCACACTGGTTGTAGTTTCAGCCCCAGCAAAATGGAAGGAGTCTCAAGCTCTTCAACTGTTTTTCCTGGAAATTTGCATGAGGACACGCAGTACCGAAATCTCGTTGACCACTTCTATCCAGACAAAGAGCACACCAATCGGTTGGTAAGAGAAGTGTACGTCGGCGGAGTGAAACGATTGGAATGCTTGCACTGCCACAAGAACTTCCAGAGACCGTTTGATATTGTGAGACACATGCGAGTTCACACAAAAGAAAGACCCTTTGCTTGTGAAATTTGTGGACGAAAATTTTCCCTGAAAAGTACACTAAAAATTCACATGAAGGTTCATAAGAAGAGTAGGTCAGCAGTAACTAAACCCTACGAGTGCCATGTGTGCAAGAAACACTTTCATTCTGCTAAAAAATTGGAACTTCATGCCGAATTGCACAGCAGCTATAAATTACAACAGTGTTTGAATTACTCAGGAGCTCCTACCTCCATGCCTACTTTGGGCAAGTGTGTAGATATCCAGGAATGCACCATTCAAAATCAAATAGTCGAGAACCATCCGCCAATTCCACGACAGAATGAGGAGCCGCCCAAGGATAGTATCAATATAGAAGGAACTTGTTACATGGCACTTAGTGGCGATAATCGTTTGGGCCTGAAGACATTCAAATGTCTTACGTGCCAGAGGCAATTTACATCTGAAAGTTCCTTGCAAAACCACAAAAAACTCCATCTAGCTCATAAAGCCAAAGAGCAGATGCTCTTAGTTCACAGTGACCAAAAGTGCATTATTGAATATTTTGCTTGTCCCCACTGCCAGAAAACGTTTGAAAGAAAGGATTCTGAATACCATCAACATGTATCGTCTCACATGGAGAATACAGATAGCGGAACACCTCCAGAACTCTCTCAAAACATCGAACAGAACCTGTCAGTACAAAATCTTGTGCACGATCCCTTACCTTGCAATTATGTTCTCCTTCTGGACGATCCCACTTCATCCAATATTGATCTCGAAGACTTAAATTTAGTTCCACACCAACCGGACGACTTATTATTTGTGGATTTTTCCAAAATACCTGGAAACGAAATCTCCGAAGAAGCTGACAACTTCTTGGATATGATTAGTCAGCCTGAAAGCCAGAGAAACGATTTAGTCACTCCGTCGGAATTTATAAATATTAGAGATTTATCAAGTACCAAAAACCATTTGTCCCAAAATATAGTCGTGGTATCGCATGAAAAGGATACCGAGAGCTGCGACAACCCTCACCATCCACCTTTGGCAGGAACTAGTACTCAACTGCAAGAGTTCCTCTTCCAGGATGTTCGTGAGAAAATTATTGAGACTGCAGAGGAAAAGCAAAAAGGCTCGAAGAACAAGCCACCTCATGTTTGTCATGTCTGCAAGAGAATATTCAAAAAACCAATCGATTTAAGACGACACATTCGGACCCACACGAAAGAAAAGCCATTCCAGTGTGATGTCTGTTCGAAGGCTTTCAGTCTTAAATGCATTTTAGATGATCACAAATTAATCCACCAGAAGGACAGGCCCGCCTTTGACTGTCAAGTGTGTGGTAAGAAATACGCCTCGAAAAATGTTCTCAACATTCATTTAAGACTCCACACCGGTGAGAAACCGTACAAATGTGAAATTTGTCAGAAAAATTTCCGGACATCCGGTCATAGAATTGTTCACATGCGAATTCATTCGAAAGAGAAAATGGAAGCAGCCAAAAAGAAGAAGAGGTGA
Protein Sequence: EVDNEFLTANNFAVLNLDNEEVADPDNIFNFNSDPCDQLENEVPKTQDSPKEIINRPKAAKRKRNKQKSHVLKSFCCDLCDNEFPNLRQLKVHKSLNHILTKFYKCQECFKDFNFEKNFMLHLATHTAAPAKCPECGKIFQRISSFIGHIETHMDDDNFKCKNCDLEFEFEEYYDRHMQKVHKEAKVLPADLIRKRNRNTSSNKNSGKYLCKICGKSFPKLSLLVRHELGHTKTKPFECLECSQRFSQKSSLQRHYLVHEGIKPFNCPECNLRFSQRTNLITHMKRVHPAKEDLGNKFQCNNCPCAFNKLNSLNRHITLMHSKVAKDADKNLSINELLEQIKWLQDDPSEQRLGDNSAIQEPIHNTLQTTTQHYHTGCSFSPSKMEGVSSSSTVFPGNLHEDTQYRNLVDHFYPDKEHTNRLVREVYVGGVKRLECLHCHKNFQRPFDIVRHMRVHTKERPFACEICGRKFSLKSTLKIHMKVHKKSRSAVTKPYECHVCKKHFHSAKKLELHAELHSSYKLQQCLNYSGAPTSMPTLGKCVDIQECTIQNQIVENHPPIPRQNEEPPKDSINIEGTCYMALSGDNRLGLKTFKCLTCQRQFTSESSLQNHKKLHLAHKAKEQMLLVHSDQKCIIEYFACPHCQKTFERKDSEYHQHVSSHMENTDSGTPPELSQNIEQNLSVQNLVHDPLPCNYVLLLDDPTSSNIDLEDLNLVPHQPDDLLFVDFSKIPGNEISEEADNFLDMISQPESQRNDLVTPSEFINIRDLSSTKNHLSQNIVVVSHEKDTESCDNPHHPPLAGTSTQLQEFLFQDVREKIIETAEEKQKGSKNKPPHVCHVCKRIFKKPIDLRRHIRTHTKEKPFQCDVCSKAFSLKCILDDHKLIHQKDRPAFDCQVCGKKYASKNVLNIHLRLHTGEKPYKCEICQKNFRTSGHRIVHMRIHSKEKMEAAKKKKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -