Basic Information

Insect: Dasypogon diadema
Gene Symbol: -
Assembly: GCA_006980735.1
Location: jcf7180002955123:43555-45336[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0046 0.31 11.4 0.0 2 23 16 37 15 37 0.96

2 17 0.17 12 6.4 1.4 1 23 43 66 43 66 0.96

3 17 2.1e-05 0.0014 18.7 0.5 1 22 101 122 101 122 0.95

4 17 0.0005 0.034 14.4 0.4 1 23 129 151 129 151 0.98

5 17 0.0019 0.13 12.6 3.1 1 23 157 180 157 180 0.91

6 17 0.17 11 6.4 0.5 1 23 236 259 236 259 0.88

7 17 0.00056 0.038 14.2 0.7 2 23 284 306 283 306 0.96

8 17 0.00015 0.01 16.0 3.2 1 23 312 334 312 334 0.99

9 17 0.00012 0.0083 16.3 2.0 2 23 340 361 339 361 0.97

10 17 4.1e-05 0.0027 17.8 0.2 2 23 368 389 367 389 0.97

11 17 0.00089 0.06 13.6 4.6 1 23 395 417 395 417 0.98

12 17 3.2e-05 0.0021 18.2 1.3 1 23 423 445 423 445 0.98

13 17 6.8e-07 4.6e-05 23.4 4.7 1 23 451 473 451 473 0.98

14 17 7.3e-07 4.9e-05 23.3 0.6 1 23 479 501 479 501 0.98

15 17 4.4e-06 0.00029 20.9 4.9 1 23 507 529 507 529 0.99

16 17 5.7e-07 3.9e-05 23.7 2.9 1 23 535 557 535 557 0.99

17 17 4.6e-06 0.00031 20.8 2.6 1 23 563 585 563 585 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0046	0.31	11.4	0.0	2	23	16	37	15	37	0.96
2	17	0.17	12	6.4	1.4	1	23	43	66	43	66	0.96
3	17	2.1e-05	0.0014	18.7	0.5	1	22	101	122	101	122	0.95
4	17	0.0005	0.034	14.4	0.4	1	23	129	151	129	151	0.98
5	17	0.0019	0.13	12.6	3.1	1	23	157	180	157	180	0.91
6	17	0.17	11	6.4	0.5	1	23	236	259	236	259	0.88
7	17	0.00056	0.038	14.2	0.7	2	23	284	306	283	306	0.96
8	17	0.00015	0.01	16.0	3.2	1	23	312	334	312	334	0.99
9	17	0.00012	0.0083	16.3	2.0	2	23	340	361	339	361	0.97
10	17	4.1e-05	0.0027	17.8	0.2	2	23	368	389	367	389	0.97
11	17	0.00089	0.06	13.6	4.6	1	23	395	417	395	417	0.98
12	17	3.2e-05	0.0021	18.2	1.3	1	23	423	445	423	445	0.98
13	17	6.8e-07	4.6e-05	23.4	4.7	1	23	451	473	451	473	0.98
14	17	7.3e-07	4.9e-05	23.3	0.6	1	23	479	501	479	501	0.98
15	17	4.4e-06	0.00029	20.9	4.9	1	23	507	529	507	529	0.99
16	17	5.7e-07	3.9e-05	23.7	2.9	1	23	535	557	535	557	0.99
17	17	4.6e-06	0.00031	20.8	2.6	1	23	563	585	563	585	0.98

Sequence Information

Coding Sequence: ATGTGTAACGGGCCAACAGATCAGGGTGTACGTGGGCCTGGAATAAGTTGCTCAATATGTGAAGAAGGATTTGTTGAAATTAGTAAATTGGAAGTCCACGTTAGAGAACATTTTAAAGAGGATAGCTTCTCTTGCTCTTATTGCAAAAATGGGTTCCAATTGTTTGCGGATTACACGATTCATATTAAACAATTTCATAAAACAGCCTGTAATTTTGTTTGCCGGTATTGCTTTTGGGAGGAGGACGGATTACTAGATTTCATCGGCCATGAAAGCAGCCATTTACCAGAAGTTAAACCTTTCGATTGCTACATATGTGGGAGAGCTTTCAGAAGCAAGGAGCTACTTTACAGCCATCAGCGAAAGTGTTTCAAAGCTGGTTCTTATTCATGTACGTCTTGTAATGGGAGGTTCTCTAGACTTGGTGATTTGTACATTCATCTGCGAGGACATCAAGACGTGCCGGTTTATAATTGTAAATACTGCAATAAAATTTTTACTGATTCCGGGACTTATGGAGTACATCTATTTCATTTCCATAGACGAAAATTAGGAACTCAAAATGAAATAGTGATTGAGAATGGTCTAAAAGAAGAGCAGGATCAGTCGAAATTGCTGGAAATACTCCCGATATTTAACACCGATGGGGAATCAACGCTTGCCCAGGACACTGCTATTTTAAATAAGTACGGCTTAGAAAGGAAGTTTGCTTGTCCGCTGTGCAAAATTGCATTTGTTGAAATGAATACATTAGAAATTCATTGCAGGCTGAAGCATCCTGGCGAGTATAGAGTAAAACAATTAGAAAACTTTAAGCAACAGCGTGAAAACATAGCTGTAACAGATATATCTTGCAAATTATGCAATGGAAATTTCAGAACTAAAATCGAATTAAGAACCCATTTACAAAAGGCTCATTTTGGTAAGAAGCCATACAAATGCAATGCTTGCAATCTCCGTTTTGTTCGGCCTTGCACGCTTCGGAATCACCTTAAATCGCACACAAATGACCATTTGACGTGTAAATATTGTTTAAAGTCCTTTCACCAGCAAATTGATTTGGAGTCTCACCTGGAAACCCACGAAGGGGAGAGTACGATCAAGTGCACCATTTGTGACATCCCCTTTTCTAATGACGAGAGTCTAAAAAAGCATGGAAAGGTCCATTCACAAGGTAAGCCACATAAGTGTTACTATTGCGATAAAGAATTTATACATGCTATTGATAAACAAAGGCACACACGAATTCACACGGGCGAAAAGCCATACGAGTGCTATGTATGCAAGAAAGCCTTCTCTCATTTGGCGAGCTACAACAAACATCTCGCTATTCATTCAGATTTTAGAGAGCACCAATGCTCAATTTGCGGTAAAGGCTTTAAACACAAGAACAATTTGATGGTGCATTATCGTAGCCATAGCGGCATAAGACCGCACAAGTGTAGCGTATGTGAAAAGGCCTTCATTACTGTGGGTAATTTAAAAGAACACATGAGAATTCATTCTGACCAAAAAAAATATCAATGTAACAAATGTGAGATTAGATTTACACACAAAACCAGTCTTAAAAGGCATCAACTTATGCACACAGGTGAAAGGCCTTTTAAGTGCAACGTCTGTGAGCAGAAGTTCTACCAGAAAACTAACTTGACTATACATATGAGGAGGCACACAGGAGAGAAGCCGCACGTTTGTGAAATTTGCAATAGAGCTTTTTATCGATCCGATACTTTAAATAATCACAAAAAGACACACGACAAAAACGGGAGATTACTTCCGTAG
Protein Sequence: MCNGPTDQGVRGPGISCSICEEGFVEISKLEVHVREHFKEDSFSCSYCKNGFQLFADYTIHIKQFHKTACNFVCRYCFWEEDGLLDFIGHESSHLPEVKPFDCYICGRAFRSKELLYSHQRKCFKAGSYSCTSCNGRFSRLGDLYIHLRGHQDVPVYNCKYCNKIFTDSGTYGVHLFHFHRRKLGTQNEIVIENGLKEEQDQSKLLEILPIFNTDGESTLAQDTAILNKYGLERKFACPLCKIAFVEMNTLEIHCRLKHPGEYRVKQLENFKQQRENIAVTDISCKLCNGNFRTKIELRTHLQKAHFGKKPYKCNACNLRFVRPCTLRNHLKSHTNDHLTCKYCLKSFHQQIDLESHLETHEGESTIKCTICDIPFSNDESLKKHGKVHSQGKPHKCYYCDKEFIHAIDKQRHTRIHTGEKPYECYVCKKAFSHLASYNKHLAIHSDFREHQCSICGKGFKHKNNLMVHYRSHSGIRPHKCSVCEKAFITVGNLKEHMRIHSDQKKYQCNKCEIRFTHKTSLKRHQLMHTGERPFKCNVCEQKFYQKTNLTIHMRRHTGEKPHVCEICNRAFYRSDTLNNHKKTHDKNGRLLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -