Ddia004874.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Dasypogon diadema
Gene Symbol
-
Assembly
GCA_006980735.1
Location
jcf7180002941375:8964-20429[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.02 1.4 9.3 0.2 1 23 289 311 289 311 0.97
2 25 0.042 2.9 8.3 0.6 3 22 320 339 318 339 0.95
3 25 0.008 0.54 10.6 0.2 1 23 352 374 352 374 0.95
4 25 0.0031 0.21 11.9 0.8 1 20 380 399 380 402 0.93
5 25 4.2e-05 0.0028 17.8 0.2 1 23 408 430 408 430 0.98
6 25 1.5e-05 0.001 19.2 4.5 1 23 439 461 439 461 0.99
7 25 1.9e-05 0.0013 18.9 1.0 3 23 469 489 469 489 0.99
8 25 9.2e-06 0.00062 19.9 4.7 1 23 495 517 495 517 0.97
9 25 1.9e-08 1.3e-06 28.3 2.1 1 23 523 545 523 545 0.99
10 25 0.00011 0.0074 16.5 2.2 1 23 551 573 551 573 0.99
11 25 6.8e-05 0.0046 17.1 1.7 2 23 592 613 592 613 0.98
12 25 2.2e-06 0.00015 21.8 0.6 3 23 621 641 619 641 0.97
13 25 0.0099 0.67 10.3 0.5 1 23 897 919 897 919 0.98
14 25 0.31 21 5.6 4.9 3 21 928 946 926 948 0.95
15 25 0.033 2.2 8.7 0.2 1 23 960 982 960 982 0.95
16 25 0.0011 0.077 13.3 1.0 1 20 988 1007 988 1010 0.93
17 25 8.1e-05 0.0054 16.9 0.2 1 23 1016 1038 1016 1038 0.98
18 25 4.8e-05 0.0032 17.6 4.8 1 23 1047 1069 1047 1069 0.98
19 25 5.4e-06 0.00037 20.6 0.4 3 23 1077 1097 1075 1097 0.97
20 25 1.7e-05 0.0011 19.0 4.9 1 23 1103 1125 1103 1125 0.97
21 25 1.2e-07 7.9e-06 25.8 1.9 1 23 1131 1153 1131 1153 0.99
22 25 1.1e-07 7.4e-06 25.9 0.7 1 23 1159 1181 1159 1181 0.99
23 25 1.1e-05 0.00074 19.6 1.0 1 23 1187 1208 1187 1208 0.98
24 25 1e-06 7e-05 22.8 1.3 1 23 1214 1236 1214 1236 0.98
25 25 1.7e-06 0.00012 22.1 3.0 1 23 1242 1264 1242 1264 0.99

Sequence Information

Coding Sequence
ATGGTTTTTAAGTTTTTAGACAAGTACCGTCGTTCACATAGAAAAGATTTAGTCACTCAAGTTGTTGACTACAGACCTTCAGTGAATGAAGGTCAAAGTTTAAAAGAGTTAAAAGCACTTTGTGGAATATTAGTACGAGCTATGAGCAAATTGATGATAATTGATGTGAACAGTGTGAACAATGAATTAAATAGCGCTTACGAGCAAGGATTGCCCGGTGAAAGTGGAATTTCTACAGTTCCATTGAAACAAAGTATAGACGACAATGGTGACTCCTATGGAACCAGAACCCTCCGACAGCAACTAGAGAAGATTTGCAGGTGTTGTGCCTCGGAAGCGGACATCTTAAATTCTATTTTTGATCCCGGCGATTATATAGCATCGATGTTAACTGCTTTAACAACGATTCCGCCCCGCAGAGATGACGGATTACCATCCAAAATATGCCTGCCTTGCTTGGATTCCCTAGCGAAAAGCACGAACTTCAAGCAGAGAGTCGAAACCGCTGACAAGATGTTCAGGAACTTGCTTGCGAAGGATTTGTGCCAGCCGAAAGGGTTGGATAAGAAAGCCGTAAGGCTGCTAGCGAAGAGTTTATCGAATATGAATGAATTGGACATGTTCATCTTGGGTCCCGACACAAAATACCAAGAAATAGACGATATAGAAGAAGGCTCCTTTAAAATATCCAGGGAAGAGGAAGAGCTGTTACCGTACTCATCTCCAGAGCCAATTCAAGAGGAATTTTCATATGATGAAGGTGAGAATGAAGCAATAGAACACTCAACCGAGGATGTCAAGAACATCAAGCCAGTGATAGAACAGCTTCAAACTGGACATCCAGAGTGCACAGACCACAGTTGTTACCAGTGTTCCGTGTGTGAGAGTAAATTTTCAGATATTGACCTGTATGTTGCACACAGCCAGTCGCACCCAGAAATGAAGGAACTCTTCTGGTGTTCCGTTTGCAAGAGAAACTTTAAAGCACGCACAACCCTGGAGCTTCACTACCGCTCCAGCCTGATCAATGAACGTAAAGTCTCCAAATCCGAATACATATGTAAATCTTGCAACATGAAGTTTAGCGTGGAGAGTGACCTCTATATCCACGGCTCAATCCACGCAACTGGTAGTAAATATATTTGTCGCAAATGCAACAAGAAATTCCCCGATATATTTAAACTAAAGAGGCACGTACCCATCCACTACGAGGACAAGCCGTACAAGTGTGATGTGTGCGACAAAGCTTTTCCGGAGATGGCAGCTTTAACAAGGCACTTCCGCCTTCACGAAGGAGAGAAGAAGGAGAAAAAATATGTCTGCAACACCTGCGACAAAAGGTATTACGACCGTCACTCCCTTAAGGTTCATAGACGGACACACACGGGAGAAAAGCCTTGGGGCTGTAGAGAATGTGGTAAAAAATTCATCGACTCCAGGTTACTGAAATCCCACCTCAGAGTTCACAAAAGTGAAAAGATGTTTGCCTGTAACTTCTGTGGCAGGAGGTTCACCCACCAAAGCACACTTAAAACTCACACCCGCCTCCATACCGGAGAAAAGCCTTATGTTTGCCACATCTGCAGCAAATCATTCGTTCAATCGTCCAATTTAAATCTGCATATGCGAATGCACTCGGGCGAGCGGCCGTATAAGTGTAAATCATGCCCTAGAGCCTTTGCCTGTTCTTCCTCATTGAACGTGCATATGCGAAGTCACGCAGATGAAGACCTAAGTGCCCTCCTGAGTACTCATACCGGTGATGAATCCAATACGTGCGACATTTGTCCCAGAAAATTCACCACACTAGGACGATTGAGGCAACACAAACGTACCCACATCGAAAAGAAGCCAATCATTTGTAAAATATGCCAAAAGGCCTATTCAAGCACTGCTTCTCTTAACAGGCATATGAAAACCCACAATAAATCTAAGAGCAGAAGACGAATTCAGAATAGTTCTGAAGACACCGACCGGGGTGATGGATTCCGTGAGCTAAATAGCATTTACGAGCAAGAGCAAGAATTGCCCGGTGAAAGTGGCATTTCTGCAGTTCCATTGGATCAAAGTATAGACGACAATGGTGATTCCTATGAAACCGGAACCCTCCAGCAGCAGCTAGAGAAGATTTGCAGGTGTTGTGCCTCAGAAGCGCACAACTTAAATTCTATTTTTGATCCCGGTGACTATATAGGATCGATGTTGACTGTTTTCACACCGATTCCGCCACACAGAGATGACGGATTACCATCCAAGATATGCCTGCCTTGCTTGGATTCACTGGCTAAAAGCACGAGCTTCAAGCAGAGAGTTGAAACCGCTGACAAAATGTTCAGGGACTTACTTGCAAAGGATTTGTGCCAGCCAAAAGGGGTGGATAAGAACGCCATAGGGCTGCTAGCGAAGAGTTTATCCGAAATCAATGAATTGGACATCATCTTGGAATCAGACATGAAGCACCAAGAAGTAGATTGTATAGAAGAAAGTTCCATCGAAATATCCAGGGAAGAGGAAGAGGTGTTACCATCCCCATCTCCATCCCCAGAACCAATTCAAGAAAATTTCTCATATGCCGGCAGTGAGAATGAAGAAATAGAACACACAACCGGAGATGACGATGATATCAAGCCAATCATAGAACAACCTCAAACTCGAAGCGGAAGACTAAAACGCAGAGATCACAGTTGTTACCAGTGTTCCATGTGTGAGAGTAAATTTTCAGATATAGACCTGTACATTGAACACAGTCGGTCGCACTCAGAAATGAAGGAACTCTTCTGGTGTTCCGTCTGTAACAGGAATTTCAAAGCCCGTACAACTTTGGAGCACCACTATCGCTGTCACCGAGCCAATGAGTGTAAAGTTTCCAAATCCGAATTCATATGTAAATCTTGCGACATGAAGTTTAGCGTAGAGAATGACCTCTATATCCACGGCTCAATCCACGCAACTGGTAGTAAATATATTTGTCGCAAATGCAATAAGAAATTCCCCGATTTATTTAAACTGAAGAGGCACGTACCCATCCACTTCGAGGACAAGCCGTACAAGTGTGATGTGTGCGACAAAGGCTTTCCGGAGATGGCAGCTTTAACAAGGCACTTCCGCCTTCACGAAGGAGAGAAGAAGGAGAAAAAATACATATGCAACTTCTGCGACAAAAGGTATTACGACCGTCACTCCCTTAAGGTTCATAGACGGACACACACGGGAGAAAAGCCCTGGGATTGCAAAGAATGTGGTAAAAAATTCATTGACTCCAGGTTACTGAATTCCCACCTTAAAGTTCATAAAAGTGAAAAGATGTACGCTTGTAACTTCTGTGACAGGAGGTTCACCCACCAAAGCACACTTAAAACTCACACCCGCCTCCATACCGGAGAAAAGCCTTATGTTTGCCACGTCTGCAGCAAATCATTCGTTCAATCGTCCAATTTAAATCTGCATTTGCGAATGCATTCGGGCGAGCGGCCGTATAAGTGTAAATCATGCCCTAGAGCCTTTGCCAGTTCTTCCACATTGAACGCTCATATGCGCACTCACACGGGTGAAAAGCCCTATATGTGCCCCAAGTGTGGTAAGAGCTTTGCCCGTCACGATCTAAGTGCCCACATAAGAACCCATACCGGTGAGAAACCGTACATGTGTGAGATTTGCCCCCGGAAATTCACCACTTCAGGACAGTTGAGACAACACAAACGTTCCCACAGCGAACAAAAGCCATTCACTTGTAAAATATGCAAAAAAGCCTGTTCAACCGCTGCTTCTCTAAGCAGGCATATGAAAACCCACAATAAATCTAAGGATGGAAGAATTCAGAATAGTTCTGAAGATGACCCAGATGACCAGGATGATGAATTGCAGTCTGATTCAGAATTAAATGAGAGCGCAGTGCTGGTGAACGACCTGTTAGCTTCCGTGGCTGAAAATACGTGGTAA
Protein Sequence
MVFKFLDKYRRSHRKDLVTQVVDYRPSVNEGQSLKELKALCGILVRAMSKLMIIDVNSVNNELNSAYEQGLPGESGISTVPLKQSIDDNGDSYGTRTLRQQLEKICRCCASEADILNSIFDPGDYIASMLTALTTIPPRRDDGLPSKICLPCLDSLAKSTNFKQRVETADKMFRNLLAKDLCQPKGLDKKAVRLLAKSLSNMNELDMFILGPDTKYQEIDDIEEGSFKISREEEELLPYSSPEPIQEEFSYDEGENEAIEHSTEDVKNIKPVIEQLQTGHPECTDHSCYQCSVCESKFSDIDLYVAHSQSHPEMKELFWCSVCKRNFKARTTLELHYRSSLINERKVSKSEYICKSCNMKFSVESDLYIHGSIHATGSKYICRKCNKKFPDIFKLKRHVPIHYEDKPYKCDVCDKAFPEMAALTRHFRLHEGEKKEKKYVCNTCDKRYYDRHSLKVHRRTHTGEKPWGCRECGKKFIDSRLLKSHLRVHKSEKMFACNFCGRRFTHQSTLKTHTRLHTGEKPYVCHICSKSFVQSSNLNLHMRMHSGERPYKCKSCPRAFACSSSLNVHMRSHADEDLSALLSTHTGDESNTCDICPRKFTTLGRLRQHKRTHIEKKPIICKICQKAYSSTASLNRHMKTHNKSKSRRRIQNSSEDTDRGDGFRELNSIYEQEQELPGESGISAVPLDQSIDDNGDSYETGTLQQQLEKICRCCASEAHNLNSIFDPGDYIGSMLTVFTPIPPHRDDGLPSKICLPCLDSLAKSTSFKQRVETADKMFRDLLAKDLCQPKGVDKNAIGLLAKSLSEINELDIILESDMKHQEVDCIEESSIEISREEEEVLPSPSPSPEPIQENFSYAGSENEEIEHTTGDDDDIKPIIEQPQTRSGRLKRRDHSCYQCSMCESKFSDIDLYIEHSRSHSEMKELFWCSVCNRNFKARTTLEHHYRCHRANECKVSKSEFICKSCDMKFSVENDLYIHGSIHATGSKYICRKCNKKFPDLFKLKRHVPIHFEDKPYKCDVCDKGFPEMAALTRHFRLHEGEKKEKKYICNFCDKRYYDRHSLKVHRRTHTGEKPWDCKECGKKFIDSRLLNSHLKVHKSEKMYACNFCDRRFTHQSTLKTHTRLHTGEKPYVCHVCSKSFVQSSNLNLHLRMHSGERPYKCKSCPRAFASSSTLNAHMRTHTGEKPYMCPKCGKSFARHDLSAHIRTHTGEKPYMCEICPRKFTTSGQLRQHKRSHSEQKPFTCKICKKACSTAASLSRHMKTHNKSKDGRIQNSSEDDPDDQDDELQSDSELNESAVLVNDLLASVAENTW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-