Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_006980735.1
Location
jcf7180002939550:19257-24869[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.42 6.5e+03 -3.4 1.5 65 100 100 134 72 153 0.43
2 4 0.22 3.3e+03 -2.5 1.2 80 112 212 243 191 253 0.55
3 4 1.1e-97 1.7e-93 312.3 10.5 2 218 318 518 317 518 0.92
4 4 0.49 7.5e+03 -3.7 1.3 80 93 965 978 936 1025 0.52

Sequence Information

Coding Sequence
ATGGGGCAATTGCATCAGTTATCGGACAGGTATCAGTTAACATCTTTAATTCATTTTGATAAATTCTTAAGTCTGAAAAGTGCAAATAATACTACTATATTTGGTGTAACTTCAAATATGAGTGAGAGTGCTAGTCAAATCGACTGTGCAACCAATCCGCCAGTTGAGAATGGTAGCGCTACTGATGGTAGTGAATTAGATAAATGCGATATAGCATCAAATTCGATTCCTTCATCACCAATAAAATCACATGATCAAAATGAAAACGAGGTGGTAGTTGCCACGAATGAGTCTATATCACAAAGCGATTCAAGTGTAAACGAAATTCCTGAGAAATATAATGATAGTGGGAATGAAAACACTGAAAAAGTCAATGCAGGAGCAGATTGCTCGTCAGAAAGTGAAGAGGATGCCAATAATGATTATGCCGTTAATGAAATAATTCTTGATGAGGATGACGTCCACAATACATCATTAACCGATCCTGGGACAGATCCACTGGCCATTGAAGATTATCAAGCTGACATTAGTAACAACAACTCTCTACTGGGAAGTTCAGGGCCATCAACTGAATTTGATACATCAACTCAAGATAATGAAACAATTTTAATCATCGACGTTGACGAAATAAAAGAAAGCGATAGTTTAACAGATGAAACTAACAGTAAGAATGAAGAGAATTCCATTAACAGTGATATCGACAAAGATGAGCACCGTGAGGAACTCTTCGAAGCGCCAAGACTGCCACTAGAAGACATTAGTGAAGAACAAGAAATACGTAGTGATGGTTCAGATTCAGGTCTTGGATCAGAGACATCTGCTTTACAAACTACAACAAACAGTGTCGATACGAGTGTGTCTATTGATTCTCCTATCAGTAAACTGATACCAACGCGTGGTAATTTAAAGCGCCGTTCTGATGAAGAAGTTTCCAACGTGATTGAAAAGAAAGTGAAACGTTCCATACAATTTGATGGAGTGAAAGTTTTTTATTTCCCTCGAATGCAAGGATTTGCGTGTGTTCCTTCTCAAGGTGGATGCACTTTAGGAATGGGAGCCCGTCATACTCATTCTAGAAATTTTACGCTTGCTGAACATGCAGCAGAACAGCGCCGCATGCATAAACAGCAGATGCAAGAAATTAATCCTCGAGGTTCTTCTAGTGAGGAGACGGATAGTGATGAGGAAATAAGTGAGGCAAGTGGATCAGACCTGGATGCGGATGCAAATGGTTTCCTTCAACCGGTTCCAGCCAGGCAGAGGAGAGCTATTTTAAAGGCAGCTGGGATTAGAAAAATAGATTCCACGGAGAAAGATGAATGTCGTGCCATTCGTAGTTCCAGGGAGTTTTGTGGGTGCAGTTGTAGAGGATATTGTGATCCTGATACATGTTCCTGCAGTCAAGCTGGAATTAAATGTCAGGTTGATCGTCCTAGTTTTCCTTGTGGTTGTACACGTGATGGTTGTGCTAATGTCGTTGGACGAATTGAATTCAATCCCAATAGAGTACGAACGCATTTTATTCATACAATTATGCGACTTGAATTAGAGAACAAAGAAAAGACTCCATCAGAGCTGCACGCAACATCAAATCCACTTTTGGCTTACGGAAATACTTGTGCGGCCAATAATTCTAACATCTCAGCTACTGCCAACAACAACTGTTCGAACAGTACTAATAATTTAAGCAACATGTGTAACTATAACTTAAGCAATATGAACCATATTCGACCTCAGCATTACGGGCACCTTCAAATGCAACAGCATAATCAAACCTACATGGGAGCAACTCATAGTCACGGCAACATGTACCCAAATATACTTCCAAGCAGTGTTCTTTCTGATAACTGTACTCTGCCTCATATGGCACAGCATCATCAACAAATGGTCAACACCGGGTGTGTTAACATGATGAACACACCTGCAATTGGCTCACCTAATATTGGACAACCTCATCAGCAGATGGATATGGGTTATAATGCATTCCGAGATATAAACACCGACACTTCTCTCTGCCCTCCAAGAAATGATAACTCCACCGGTAATCTGATGTTAGACTACCAATCAGAGAGTAGTCAAGTGTATCATGGCGCATATAATAATCAGTCCTATTTGAATCATTCATACCATAATCCCATGATGAATGCAAGCAATGGCTATCACACACCTGTGCCCACATATTCAAATTATCAGCAGCACTATGTCGCATACGCTTCGTCCGCCTGTTCTAATGAAAACCTGGAAATTCACGATCTAACGTCAACGGACGATGAGTCAAGTAGTTACATAAACTTACATCCTCCATCCGCAAATTCATCTCGACTAGATGCTATTAATGATCTTCTACAAAATAATCGCAACACTCTTCCAGCTTCCCCGTCAATAACTACCAGCTCATCTTTAACCGATCCTTTACCTATGAAACCCATAAATGTTGCTCCGACAGTTTCTTGCACATTGGCCCCTTCTGCGCAAACTTCAACGTCTGTTACGGATGGCACATCAACAACACTTTCACCTGTAAAAAACAAAACAGTTGGTCAATTAAATGTATCATCGGGTGTCCGGGAGTTTGTGGACTTAACCCATGATCGTGGTCTTATGAGATTAGACAGTACATACACTTCTGCGACAGCAGCGACAAGTTCGCAAAGGTTAGAGGAGGAACCTCAGACCTTATTCTTGGAACCAGAACTGAAACGGAGGGATAGTGATGTCGAAATTATAGAACCTATACAAAATCCATTGAATATCAAACTAGAGGGCAACCAAGAAGCGAAAGCCAGTGTTTCGCCAGAATTTACCACTTATAGTAACCTTGAGGTGAAAGACCCAGAGTTAAAAAAATGCGAAGATGTGGCAAAAACGGAGCATAATTTTTTCGAAAATGATAAAGAAGAACAATTAGAATCATCTGAGGACACAAATTCTACCTCCACGCCTAATAATTCATCGGAGTCAAAGCTGTCTTTAGAAAAAGAGGGTGAACCACCGAATAATTTTGAGCTATTTGAAAGCTTAGAGACATCGCAAGAAAATAATTTGAAATCGAATATTGAAACATCTGCAGACAATGCACCCTTATGTAAAGAAAAATTCCACGAATCAATGGAAGACATCAGTAACGACGTTGAATTCATGGGATTTTCACTTAACACTGCCTTAGCCAATAAGGATGACGAATCTTCAGTACAAACAGTTGAATTGTTGGATCGAACTGATTCAATGATTGAAACTTCAACATCAATAACAACTGCTTCAACGATTGAAACTTCAACATCAATAACAACTACTTCAACGTCAATTTCTACGAAAACAACTTTTGAATATTTTCAACACCGAAAAATGGCAGCCACACACCAACAGAAGTGGTATTCATATAGACGATATTTGCATAGATAA
Protein Sequence
MGQLHQLSDRYQLTSLIHFDKFLSLKSANNTTIFGVTSNMSESASQIDCATNPPVENGSATDGSELDKCDIASNSIPSSPIKSHDQNENEVVVATNESISQSDSSVNEIPEKYNDSGNENTEKVNAGADCSSESEEDANNDYAVNEIILDEDDVHNTSLTDPGTDPLAIEDYQADISNNNSLLGSSGPSTEFDTSTQDNETILIIDVDEIKESDSLTDETNSKNEENSINSDIDKDEHREELFEAPRLPLEDISEEQEIRSDGSDSGLGSETSALQTTTNSVDTSVSIDSPISKLIPTRGNLKRRSDEEVSNVIEKKVKRSIQFDGVKVFYFPRMQGFACVPSQGGCTLGMGARHTHSRNFTLAEHAAEQRRMHKQQMQEINPRGSSSEETDSDEEISEASGSDLDADANGFLQPVPARQRRAILKAAGIRKIDSTEKDECRAIRSSREFCGCSCRGYCDPDTCSCSQAGIKCQVDRPSFPCGCTRDGCANVVGRIEFNPNRVRTHFIHTIMRLELENKEKTPSELHATSNPLLAYGNTCAANNSNISATANNNCSNSTNNLSNMCNYNLSNMNHIRPQHYGHLQMQQHNQTYMGATHSHGNMYPNILPSSVLSDNCTLPHMAQHHQQMVNTGCVNMMNTPAIGSPNIGQPHQQMDMGYNAFRDINTDTSLCPPRNDNSTGNLMLDYQSESSQVYHGAYNNQSYLNHSYHNPMMNASNGYHTPVPTYSNYQQHYVAYASSACSNENLEIHDLTSTDDESSSYINLHPPSANSSRLDAINDLLQNNRNTLPASPSITTSSSLTDPLPMKPINVAPTVSCTLAPSAQTSTSVTDGTSTTLSPVKNKTVGQLNVSSGVREFVDLTHDRGLMRLDSTYTSATAATSSQRLEEEPQTLFLEPELKRRDSDVEIIEPIQNPLNIKLEGNQEAKASVSPEFTTYSNLEVKDPELKKCEDVAKTEHNFFENDKEEQLESSEDTNSTSTPNNSSESKLSLEKEGEPPNNFELFESLETSQENNLKSNIETSADNAPLCKEKFHESMEDISNDVEFMGFSLNTALANKDDESSVQTVELLDRTDSMIETSTSITTASTIETSTSITTTSTSISTKTTFEYFQHRKMAATHQQKWYSYRRYLHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-