Basic Information

Gene Symbol
NCOR1_1
Assembly
GCA_006980735.1
Location
jcf7180002945164:13079-23432[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.5e-08 4.4e-05 23.3 0.0 3 43 511 551 510 553 0.97

Sequence Information

Coding Sequence
ATGCTAAAGAAAAGTTCTGCGACAGCCGAATTTCTTATCTCATTGCGTTTTATAAAAAGTATTATACAACACAAAGTCACTGTTGTTATCCTTGAAAGGCTTTATCGACCAAAGGGATTTAAGCCTGTTGATACGCCACAATCATATTCAAAAGGAGGGGTTGGACAGCCACCACCACAACCCCAGCCAACATCTCGTTCCGCAGCTAGCCCATTATCACCACCGCGGCCCGGACCTGGAGCGGCAAATACGTATCCAAGATTTGCAGATGTTACAGCGGTACGTGAAGCGCCACACCGTTATGTTCAACAGAGTGCGTATGGGGCTGGTCAAGTGCAGCAATTTCGAGAAAATCCCTACGCTCGAATACCTCAGGTACCTGCCCAGGTGCAGGACTATCACAGGGCTGCAGCGCCCACAGTTTTGTCGAGTGGCAGTAGTTTGCCTGTTGTATCAGTTGGACCCACCAATACGATGGACAGTATACCACCTCAGGGACCGCCAACTGGACGTCAGAGGATCTCTCTTATTCCACCTCCGCAACATCCCAGTGAGTATATGTCGGCGGCTAGACCACCGACGCAGGCTCCACCGGATCCGGGAGGACAACCCTTTAAGAAATTACGTTTAGGAGATACAAACCACCTGCCCCCTCAACAACAGCCGCTGAAGGTCGATATTAGAGAACATCGTCCCGCTACCACAGAGGCGTATCATCCGCAAGTCGAGGCCATCTCACCTACACTGCCGAATGATACTGTCGAAGAGAGACGAATAACAAAGGATGATCTTCTTACACAGATTCACAAGGTCGACCTTGAGATTGGGAATGCCGAGAACACAATGGTAATGCTAAAAAAGAAGGAGGAACAGTTAGAAGAAGCATCCTCGCGACCTTCCAAAGTCGAGGAGTTGGCAGAAGTGCAACCTAAGCATCGGAGTCTGGCCCAGAAAATTTACGCCGAAAATCGAAAGCGGGCAATCGAACAACATTCCGTTCTTGAGAAATTGGGGCCACCGGTAGATCTGCCATTGTACAATCAACCATCAGACGTTGAGATTTGTCAGGAGATTATCCAGCGTCATCAGTCATTTAAATCGCGGCTGCTATTACACTTACGAAAGATAAAGCAGGAGCGAGCGGCGCGAAATGCGGCTCTCGTTGAAAAGTATGCTCAGTTGTCGCAGGAGTGGCTAAAGCGTGTTGAAAAGGCTGAATCAAGCGCCAAACGGAAAGCGAAAGAAGCGAAGAATCGTGAGTTCTTTGAAAAAGTTTTTACGGAACTGAGGAAGCAACGGGAGGACAAGGAACGCTTCAATCGTGTGGGGTCCCGGATAAAATCGGAAGCCGATTTGGAGGAGATTATGGACGGTTTGCAGGAGCAGGCCATGGAAGATAAGAAAATGCGTTCATATGCTGTGATACCGCCCCTGATGCTGGACACTAGACAGCGTCGTTATGTTTACCACAATGAAAACGGGGCATTACCTGATATGGTCCAGGACTTCAAGGAAAGGCAGAACATAAATGTTTGGACGGCTGGTGAGAAAGAACTCTTCAAAGAGAAATTCCTCCAGCATCCGAAGAATTTTGGCGCAATTGCGGCCAGTTTAGATCGCAAGTCGGCGCAGGACTGTGTTCGCTACTACTACCTCAGTAAAAAGACGGAAAACTATAAGCAGCTGTTGCGAAAGTCGCGGCAAAGAACGCGAAGTTCACGAAATCCGCAGAAATCGCAGCAGGCGCAAACGCAATGCATTGTTGATTCACTGACTACAGGGGTCACAACACGGCTGCAGCGGGAGCAGCAACAAAAGACTGGCGGTCGGGATCGTGCCGCACAATCAACGTCGACAACGTCGACCACCCTTACAACCTCAACGGCCTCAACGGCTACGGCAGCATCAACGGCGACCTCAATGGTCACGACGACTGCAATTACTTCAACAACAGTCGCATCTGGAAGTTTATCTTCAGGTGCAGCGAATTCGTCTAGTGCGAGCGTGATTTCAGTGTCATCAACGACTGCAAGTTCAACAGCGGCTGTGTCAACAACGTGTAATACCGTCACCACGCAAACAACAACAACAACATCCTCATCGACAACAGTTGTGAACACAACTGCTAGAAGCGAACAAAGCTCGTCGCAAGTAATAAATGGTGTCGGAAATGGAGTTGCGTCCATGGAGACGGCTTCGAGCGCGAGTAGTCAAATAAGTCAAGGTAGTGCGATATCAGGATCGCAGTCGTCTTCCGCCAATGAGAGTAGTTCGAATGTGTCAGGGGTGAACGCCCTCTCCGCGGCTGTCCACAGTTCCGAACCACTTCTCAGCGAAGACGTGACAATGGTTAGTAGTAAGGATCACTCGAGCTCTTCGACAGCTCCCACTACTATCAATAACAGCAGCAACAGTAGCAGTAGTATGGGAGGTGTGAATATGAGTTGTAACAGTGGTGGTAGTGGCGGCCCAATTTTGAACGCCACTTCTGGGGATAATACTTGTTCACCCCTCACTGCTGGGACTACAACAGCCACGACGACTGTAGCAACAACTTTCACTTCCACTCCCAATGGTATCAAAACTGAACTTGTTATAGCGTCGGCTGTTGCTAATGACAATAAATCATTAAATAATGGAGGTGATAAAGATGCGAAGGATCCTCTTGCGAGTACTCCTGTAGATGAAAAGAACAATCTTAATAGTATCGGTGGATTTAAAGCAAAAACACCGACGATTTCAACAGCCCAAGAGATTGTGGACGGAAGTGATAGTTCAGGTGTTAGTGATATTAAAAAGAAACGACTTGATTCGGATGCAGCTTCAAATCCTGCCATTATGGCCAATGATGTGGCCGATACTAGTGTTGTGGAAAGTAAGGGTAATGATATTAAAAAGAAACGACTTGATTCGGATGCAGCTTCAAATCCTGCCATTATGGCCAATGATGTGGCCGATACTAGTGTTGTGGAAAGTAAGGCTCTCTGCTCTGCTCCAAGCTCATGCTTGAACCACGGAGAAGAGAATGCTTGA
Protein Sequence
MLKKSSATAEFLISLRFIKSIIQHKVTVVILERLYRPKGFKPVDTPQSYSKGGVGQPPPQPQPTSRSAASPLSPPRPGPGAANTYPRFADVTAVREAPHRYVQQSAYGAGQVQQFRENPYARIPQVPAQVQDYHRAAAPTVLSSGSSLPVVSVGPTNTMDSIPPQGPPTGRQRISLIPPPQHPSEYMSAARPPTQAPPDPGGQPFKKLRLGDTNHLPPQQQPLKVDIREHRPATTEAYHPQVEAISPTLPNDTVEERRITKDDLLTQIHKVDLEIGNAENTMVMLKKKEEQLEEASSRPSKVEELAEVQPKHRSLAQKIYAENRKRAIEQHSVLEKLGPPVDLPLYNQPSDVEICQEIIQRHQSFKSRLLLHLRKIKQERAARNAALVEKYAQLSQEWLKRVEKAESSAKRKAKEAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQAMEDKKMRSYAVIPPLMLDTRQRRYVYHNENGALPDMVQDFKERQNINVWTAGEKELFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPQKSQQAQTQCIVDSLTTGVTTRLQREQQQKTGGRDRAAQSTSTTSTTLTTSTASTATAASTATSMVTTTAITSTTVASGSLSSGAANSSSASVISVSSTTASSTAAVSTTCNTVTTQTTTTTSSSTTVVNTTARSEQSSSQVINGVGNGVASMETASSASSQISQGSAISGSQSSSANESSSNVSGVNALSAAVHSSEPLLSEDVTMVSSKDHSSSSTAPTTINNSSNSSSSMGGVNMSCNSGGSGGPILNATSGDNTCSPLTAGTTTATTTVATTFTSTPNGIKTELVIASAVANDNKSLNNGGDKDAKDPLASTPVDEKNNLNSIGGFKAKTPTISTAQEIVDGSDSSGVSDIKKKRLDSDAASNPAIMANDVADTSVVESKGNDIKKKRLDSDAASNPAIMANDVADTSVVESKALCSAPSSCLNHGEENA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-