Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_006980735.1
Location
jcf7180002944416:17960-42079[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.71 7.7e+02 -0.3 0.1 7 18 207 217 204 217 0.91
2 3 6.8e-16 7.4e-13 47.8 0.1 1 45 303 348 303 348 0.95
3 3 1.2e-18 1.4e-15 56.5 0.0 1 43 739 782 739 784 0.95

Sequence Information

Coding Sequence
ATGGGACGCAGGAAATGGAAGCTCTACCAAGAAGTTCTTGCACGATCCCAATTGAATACAAACAGTTCAAATACAGCTCAAAACGAAAATTCAAATCAGAGCAGCAAAGTTGTTACACTACAGCAGCCAGAAAAGGAAAATTCGGCTTTACAACCGCAAGCCTCAATAGAAGTTTCCTCAAGAGGGAGAGTAACCCCAGCAATAAAAAGCGAGATAAACGAAAATCTGGAAGACAAAGGCTGTGTAACTTTACTGAAAGAAGAAAAATTGGAAACAGATTCAAGAGGTAATTCTACAAGCATCACGCCGGAAAGTAGCGAGCGGCCAGTAACTCCCATTGACTGGAAACCAGACGAAAAGTGTTATTTCTGTGTTGACGGGAAGCTTCTCACAGTGAACGAAAAAGGCGATTTAGTGGCAGAGTCTGGCCCGGCATCGTCCGAGGCAGAACTCGCCAACAGGACGTCTATAGATTCTGAAAGTGATTCCAGAGACAGCTCTCCCGATATAGAGCTCCATAGTCAAAGACCCACAAATGCAAACAAAACTGTGACATCACGTTTAAGAGATTCACAACCACCGAACATGACTTCGTTGGAGTCAATGACCGCACACCTGGCGGCAATTGCCTCAATTCAGTCTGGTCTGAGTCCTTTTTGTCCAAGTTTGTGGTATCATCAGTTAACTCAACAAGTAACATCAGCTTCAGCACCTACCTCAGTAACATCAGCTGCCCCAATTAGTCCTTCAATCAAAGATTCGCCTAGTCCCAGTGATACAACAGGTGAACAACCGCTAGATTTAAGTGCAAAACCGTCTCCAAATTCCTCATCAGCTAGTGGCGATCCAAAACAGGTATTCAGAGCCAAACCCCGTATGTCCGCCGTTACAGGACGGCGAACATATACTGAAGAAGAGCTGCACAGTGCTTTACAAGATATAATAAGTGGAAAACTTGGAACACGACGAGCAGCTGTCTTATATGGAATCCCAAGGTCGACGTTGCGAAATAAAGTTTATAAAATTGCAATGGAACAGAAACGTGAAGCACACTCACTCCATCCACCAACTTTGGATGAATTGGTCGACGCCGATGACGAAGATAAAGAACTTTCTGGAGATGAAGAAAAAGATGAAAAATTATTGGCAGCAGAGGATCTTGCCAGATTTACTACATCACAATTAGCCGCCCTTCAGAAAATCACCACAGGTTGTGATAGTAATCAAACGGACATCAAACCTTCCACATCACTTGATACCCAAGCGAAAATTCCACCTACAACACCAACACCACAAACACCCCCCATAACACCCAATCCTTGGCTTGATCCCAACGTCCTGTTGCAAAGTCTCTTGCTAACTGGCAGTTTGGGTGCTTTACCTGGACTAATGCAGCCTAAAGTAGATGATCCAGTTGCTTTCAGAGAACTGTTTAGCAATTTAATGATACAACAGGAAGAAATGCTTAAAGAACAAATGAAAACGCCTACAGCAAGTAGTGATATATTGAATAATGGCAAGGCGAGCTTGCTAGATCCTAGAATACTTATGCAAAATCTACCCTTACTACAACAGCAGCACCAACAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACACCAACATCAACACCCTTCTTATCTGTATCAAAGTCGCTTACCAAAGTCTGAAACGCCTGAGACCAGCTCATCTGTTGACATTGTGGAGAGCATCGATGATCCTTCAGTTATTTTAAAAATTCCGTCCTACAAGCCGGTAGCCTCATCCTCATCTTCAGGTAAAAATGGTGAGCATTTAAGCTCCCCGATACCACCTACCACCGCTCCAATACTATCAAGAAGTCCTCAGCAACCAAATAACTTGCCCGGGATATCTCCTCCGTTGATACGACAAAGTAGCGAATCCCAATCACCGCCAATTTTCTCCTTAAGGGACGTTATTGCGAATAGTATAAGCCGAACATTTAATCAGCAGGCATCTAAAGAAGCGGCTGTTCAGAAGCCCGTTCAATCCAGCGATAATGCTGAGCAGCAAAAACGGGCTAGTATTTCCGTAATAAAAAATCTTGGAGGCACGGACATCTCCAGGTTTGCAACAACACCCAATTTACTAAGCAGTAACACTAGTAACACTTCTCAAAGTACTGCTAGCACCTCGGGCGGGGTTGGGGGGAAAGGCACCAGACCAAAGCGAGGCAAGTATAGGAACTATGATCGAGATAGTTTAGTGGAGGCTGTTAAGGCTGTTCAGCGCGGTGAAATGTCAGTTCATAGAGCTGGGAGTTACTACGGAGTACCTCATTCGACTTTAGAGTATAAGGTGAAAGAGAGACATTTAATGAGGCCAAGGAAACGAGAACCAAAACCACAACCTTTAGATGATCGAACAGGGAGCAGTAGTTCTAGTTCAACAACTTCAAAAAACACAAACATTCCAGGTATTGCGGCTGTTAGTAGTATAGATAAAATGAAACCATCTATAGCTGCACAAAAGCCAGCTTTGAAAAGTAACCCACCATTCCCAAGCACATCACCAAACGGTATGAAAGTGCCGATTTTCGATCCGGCAATGGCTGCCCAACTACAATACACACAACACTTATTTTGGCCACATTCTGCAGGTTTTAGTGCGCTGCCTATGGATTTTCCTAGAACATCGGGAGGTACGACGGGCCCTCCTACATTTCCTCCTAACACCGAAGGCTTTCTAGCCTCGCAAATGATTCAGAGATTTCACGAGGAGACGAATAGACTGAGTGGGAGCAATATAAGCACGACCAATACGACCACTTCATCATCTGTCGCTGGCAGTAAGTTTAGTTCAAATAGTTCGAATCCTCCGATTAAAAGTGCTCGAGAAATAGCCGAAAGTTTGTATGATAATGGCGGAGCAAACGGGTCATTCTTGGATGGTATAATACGAAGGAGTCTAGACCGCAAGCCAGTAGATTTTCCACGCGGTGCACTAATTGACCAACTTGTGAAGAACACAAGGACTATAACTAGTAATAGTGACCAATTAACAAATACAAAAACCAAAAGGCCTGCCAGCCCAGTTAATTTCCCTGTGATTGACATTAAGCGCGAACGTGCGAGTCCCACCACATCAGTCTTAGCCGACACCGAGCGCAGTTCTACAGATCCCGACATATCAAAAGAAACAGCTGAAAGCTTAGTGAAGTTGCGTGAAGCGCGCAGCATAAAAATAGAAGATCCTCAACAAAGCCTTCATCAAGTGCACCATTCCTCAATACATCGCCAACAATCCCAGCTTCATCACCCTGTACCGGGCAATATTCGACAATTGCCCATAGAAGATCTAAACGGTGGTGGCAGCAGTATGCATGAGAAACTAGGTCAAATAAAGTCTGAGAAGGAAGACATTTTATAG
Protein Sequence
MGRRKWKLYQEVLARSQLNTNSSNTAQNENSNQSSKVVTLQQPEKENSALQPQASIEVSSRGRVTPAIKSEINENLEDKGCVTLLKEEKLETDSRGNSTSITPESSERPVTPIDWKPDEKCYFCVDGKLLTVNEKGDLVAESGPASSEAELANRTSIDSESDSRDSSPDIELHSQRPTNANKTVTSRLRDSQPPNMTSLESMTAHLAAIASIQSGLSPFCPSLWYHQLTQQVTSASAPTSVTSAAPISPSIKDSPSPSDTTGEQPLDLSAKPSPNSSSASGDPKQVFRAKPRMSAVTGRRTYTEEELHSALQDIISGKLGTRRAAVLYGIPRSTLRNKVYKIAMEQKREAHSLHPPTLDELVDADDEDKELSGDEEKDEKLLAAEDLARFTTSQLAALQKITTGCDSNQTDIKPSTSLDTQAKIPPTTPTPQTPPITPNPWLDPNVLLQSLLLTGSLGALPGLMQPKVDDPVAFRELFSNLMIQQEEMLKEQMKTPTASSDILNNGKASLLDPRILMQNLPLLQQQHQQQQQQQQQQQQQHQHQHPSYLYQSRLPKSETPETSSSVDIVESIDDPSVILKIPSYKPVASSSSSGKNGEHLSSPIPPTTAPILSRSPQQPNNLPGISPPLIRQSSESQSPPIFSLRDVIANSISRTFNQQASKEAAVQKPVQSSDNAEQQKRASISVIKNLGGTDISRFATTPNLLSSNTSNTSQSTASTSGGVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDDRTGSSSSSSTTSKNTNIPGIAAVSSIDKMKPSIAAQKPALKSNPPFPSTSPNGMKVPIFDPAMAAQLQYTQHLFWPHSAGFSALPMDFPRTSGGTTGPPTFPPNTEGFLASQMIQRFHEETNRLSGSNISTTNTTTSSSVAGSKFSSNSSNPPIKSAREIAESLYDNGGANGSFLDGIIRRSLDRKPVDFPRGALIDQLVKNTRTITSNSDQLTNTKTKRPASPVNFPVIDIKRERASPTTSVLADTERSSTDPDISKETAESLVKLREARSIKIEDPQQSLHQVHHSSIHRQQSQLHHPVPGNIRQLPIEDLNGGGSSMHEKLGQIKSEKEDIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01256331;
90% Identity
-
80% Identity
-