Basic Information

Gene Symbol
ct
Assembly
GCA_006980735.1
Location
jcf7180002946300:1734-38810[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 6.7e-27 5.1e-23 80.7 0.0 3 71 342 411 340 417 0.94
2 4 1.2 8.8e+03 -3.4 0.1 15 30 528 543 525 556 0.66
3 4 4.5e-32 3.4e-28 97.2 0.0 3 77 768 843 766 845 0.96
4 4 6.5e-31 4.9e-27 93.5 0.0 3 76 967 1041 965 1044 0.96

Sequence Information

Coding Sequence
ATGGCGACGAAACATAGGCTTATGCGTCCGATGTTGAAGCAAAAAGGATCTGCATCATGTGCGACAACAGCCGCAACAGAACCAACAGGCGCCACTACAAGCAAATCTCACGCCACAAATGAACCATCATCAATGGTGGCAACAGATTTCTCCGCCACAGTGAAAAGTGCAAGTGCATCACCGTCATCAGTGAGCAGTGATAATGTAAATCAAAGAAATATACAAAAATTGCCACAATCAAATATGAGGGCTAGATCAGCCACCAGCACCCCATTGAGAGAAAGTCCCAAAGATCGTGATAACTCCCCACAAATATTATCTGGAAATTTTCAAAATGTCGAACAGTTTGGTTCATTTCTTGGTGAAGAGATTGTGAGTAATTGGCGTCGCGGTTATGAATTACCGCCACCACCGCCTACATCCCAACTGTTGCCATCGATGGCTGTGACATCTGCTGCAGCGATGGCAGCAGCAATGGCAACATCGACAACAACAACAACGCCAATACCTTTCCAAAGTTTGCAGCAATCAGCAAAATCACCACCGACAGGACCCTCAACCACAACACTTTTAAGCCAATTAGTTAACTCGACATTTTCTAATTCTCTCAAAACAGATACGACGCCAGTCCCCTCCCTGAGCAGTTCACAACAGGACGGCGACAAGGCTAACAGCCACCACGAAACATCTTCTACGGCGAGTACACCAAATTTTCAAGATGGCAGATCGACCGACGAGCACATGAACGGGACGGGCGGGGGCATGACACCAATGTCCCTATCGATGGTCAAGACAGAGGACAACAACAACACCTTGGGTCCCTTGCCACATGTACCAACCGGCTTCCTGCCTGGACTACCCTTTCAGTTTCAGGACCGTGGCCACTTCCGTTTCGCCGAAGACCTACAAATGCCTCCGGGAACAATGGCTGGCCGCCTTGGGGAGTCCCTGATACCCAAAGGCGATCCGATGGAGGCGAAACTGCAAGAAATGTTGCGCTACAACATGGACAAATATGCAAATCAAAATTTAGACACACTTCACATATCACGACGCGTCCGGGAGCTGCTGTCCGTTCATAACATCGGCCAGCGTCTATTTGCCAAATACATCCTCGGACTGTCGCAGGGAACCGTATCGGAACTGCTATCAAAGCCAAAACCCTGGGATAAATTAACGGAGAAGGGACGTGACAGCTATCGGAAGATGCATGCCTGGGGATGTGATGATAACGCCGTTCTATTGCTGAAGTCATTGATACCGAAAAAAGACTCTGGTATGCCTCAGTATGGTCGATCTGAAGACCCAATGAGTGAGGATCGTATTGCGCATATTTTATCGGAAGCATCAAATCTAATGAAAGCGCCACAAAGCCAAGCTTTGCATCACCATCAACAGCAGCAACAGCAACAGCAGCAACAGCATCAACAGCAACAACAACAACAAATGCAGCAGTCCGTTCAGCAGCAACAACAAAGTCATCAGATGCAATCTTCAGTGGGACAGGAAGACACCCATAGCAACGAAGATTCCAAGTCCCCACACAATCAGTGCCCTTCACCTTTCTACAAAGAAGCATTGCAGAGGCGCTTGAAAAATGAAGAAATGTCCCAAGAGAAAGTAGCAAGGATTTACCAAGAAGAGCTGGCGAAACTGATGTCACGAACACCGAGAGACACGTTCCCAAGTTTTCTCTTTCCACACTTTTTCAGTGGTGGCATGCCACCAGCAGTAGCAAGTCAAATGCCAGATGAGAATATCCGAATGGCCTTGGAGGCCTATCACCGGGAATTAGCAAAACTGCAGCAAACTGGCGGAGCTCTCCCAAATTTCCCTAATCTTCCAGGTCTTCTGGCTTTGCAGCAGCAAGCGCTGAATGGGGCGCAAGATTTGTCCGTGCCAAAGGAAAAGTCAATGAAAATCAATGGACAGCAGCAGAATTTATCGTCTGGTAGCGATCACAACGAACAAAATGCCAAAGAAAATTCCAACGCTAATGAAGACGCCCTTCGTCATTCGAGTGCATTCAGCTTGGTCCGCCCGAAGCAGGAGCCCGGGACACCAGTATCTAACGCAAACACAAATGCAACAGCAAATCCAAGCCCCCTTGGTAACTCCATTCTTCCACCTGCAATGACGCCAAATGAAGACTTCTCGGCAGCAGCAAGTCCTCTCCAGAGAATGGCGTCGATCACAAATTCACTTATTACTCAGCCGCCAGTAACGCCTCACCACAGTACTCCTCAACGACCAATGAAAGCAGTGCTTCCACCAATCACTCAGCAACAGTTCGACATGTTTAACAATTTGAACACCGAAGAAATAGTCCGACGAGTGAAAGAAGCGCTGTCGCAGTATTCCATTAGTCAAAGACTCTTTGGTGAGTCTGTTCTAGGCCTGTCACAGGGGTCAGTATCAGATTTGTTGGCTAGGCCAAAGCCATGGCATATGTTGACCCAGAAAGGCCGAGAGCCCTTCATCAGGATGAAGATGTTCTTGGAAGATGAGAACGCTGTCCATAAGCTTGTCGCCAGTCAATATAAAATTGCGCCCGAAAAACTAATGCGGACGGGAAATTATAGCGGAAGCCCTCAAATCCCCTCCGGACTGAACAATAAGATGGTTCCCATGCAGAAGATGATTAACGATATCAAAATGGAACCGCAGCATCTGATGCAGATGCAGGCCGCCGCAGCCATGAATCACATCCCAACTTCACAGCACCAACAAGGTTTACTATTGACACCACCAGGTCTCCCACCACACCATGCCATTAACTTGCCTTCCAATGATAAGAAACCAATGCTAATGCCAATGCACTCTCCGCAGCAGAACAATGCGATGCGCAACATGCATCAACACATGTCGCCAACCGTCTACGAGATGGCAGCACTAACGCACGACCTCGACACCCAAGTCATAACAACGAAGATCAAGGAAGCTCTGCTCGCCAATAACATCGGACAGAAAATATTCGGAGAGGCTGTGCTGGGTTTGTCCCAGGGATCCGTGTCTGAGTTGTTGTCAAAACCAAAACCGTGGCATATGTTAAGCATCAAGGGGCGAGAACCGTTCATTAGGATGCAGTTGTGGCTATCCGATGCGAACAATGTGGAGAGACTGCAGGCTCTAAAAAATGAAAGGCGCGAAGCTAGCAAAAGAAGGCGATCGACAGGACCGGGTACGCAAGATAACAGCTCCGACACCAGCAGTAATGATACTGCGGATTTTTACACCAGCAGTCCTGGACCGGGATCAGTGGGTTCTGCTGGTGCCCCACCAAATAAAAAGCAACGCGTTTTATTCTCAGAAGAGCAAAAAGAGGCTCTTCGATTGGCGTTTGCTTTAGATCCCTATCCAAATGTAGCAACCATTGAATTCCTTGCCAATGAATTGGGTCTTGCCACGCGCACGATAACGAACTGGTTCCACAATCATCGAATGCGACTCAAGCAACAAGTGCCGCACGGAGCACCAAATGAACCGGTACCAAGCAGAGAGAATCAGTCGGGAACGCCTTTTGATCCGGTCCAATTCAGAATTTTGCTGAATCAAAGACTAATGGAGCTGCAAAAGGAACGAATGGGATTAAGCGGTGTTCCACTTCCCTACCCACCGTATTTCGCCGCAAATCCCAATCTTGCAGCTTTGATTGGTCGAGGATTGCTTCCAGCTGGTGAGCCTGACTTGACCGCATTGAACAATGCATTTAAGGAACAAATGAATGGACTGGACTTATCAATGAACTCACTGAAAAGAGAACGTGAAGAGGAGTTCGAAGACGCCGATGGTGAAGGTGATAGTCATGTCTCTGATACGGAGTCTATTGATGGTTCCGACGTTAAACCAGAACTGAAAGAAACACCAACGTCAATTCCATCGGCCTCTTTGCAATCGAGAATATCTCGAAGAAAACCTGCCGCTCCACAGTGGGTGAATCCTGACTGGCAGGACAATATGAAAGCTGGTGCTGGAGCACCTGGTGGCCCCATCACTGGAGGGACTGGTGGCAGTGATCAAGAAGTGATAATCAATGGTGTTTGTGTTATGCAACAGCAAGCGGCTGATTATAGTCGAAAATCTGGAACAGAAGAAACCGTCCGAATTGAACCAACAGCGGTCCAAGACCGTTTTAATGATGATGCCGACGATGATGTAACATCGGACAATGAGGATGAAGATGTCCGAGGTGAGACAGAATCACAGATATCGAACAAACAATCAGAATCCGGTGAAACGAACGAGAATGATGAGAATGAAAGTGTGCCGGTGAAACAGGAGGACTGTGAAAGTACTGGCAGAAGGAGTTCTCATGATATATCAGAGAGTAAAGGGGATGACGATGAAACTCCGGGGGTGTGGAATTACTAA
Protein Sequence
MATKHRLMRPMLKQKGSASCATTAATEPTGATTSKSHATNEPSSMVATDFSATVKSASASPSSVSSDNVNQRNIQKLPQSNMRARSATSTPLRESPKDRDNSPQILSGNFQNVEQFGSFLGEEIVSNWRRGYELPPPPPTSQLLPSMAVTSAAAMAAAMATSTTTTTPIPFQSLQQSAKSPPTGPSTTTLLSQLVNSTFSNSLKTDTTPVPSLSSSQQDGDKANSHHETSSTASTPNFQDGRSTDEHMNGTGGGMTPMSLSMVKTEDNNNTLGPLPHVPTGFLPGLPFQFQDRGHFRFAEDLQMPPGTMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVLLLKSLIPKKDSGMPQYGRSEDPMSEDRIAHILSEASNLMKAPQSQALHHHQQQQQQQQQQHQQQQQQQMQQSVQQQQQSHQMQSSVGQEDTHSNEDSKSPHNQCPSPFYKEALQRRLKNEEMSQEKVARIYQEELAKLMSRTPRDTFPSFLFPHFFSGGMPPAVASQMPDENIRMALEAYHRELAKLQQTGGALPNFPNLPGLLALQQQALNGAQDLSVPKEKSMKINGQQQNLSSGSDHNEQNAKENSNANEDALRHSSAFSLVRPKQEPGTPVSNANTNATANPSPLGNSILPPAMTPNEDFSAAASPLQRMASITNSLITQPPVTPHHSTPQRPMKAVLPPITQQQFDMFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPSGLNNKMVPMQKMINDIKMEPQHLMQMQAAAAMNHIPTSQHQQGLLLTPPGLPPHHAINLPSNDKKPMLMPMHSPQQNNAMRNMHQHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKNERREASKRRRSTGPGTQDNSSDTSSNDTADFYTSSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLATRTITNWFHNHRMRLKQQVPHGAPNEPVPSRENQSGTPFDPVQFRILLNQRLMELQKERMGLSGVPLPYPPYFAANPNLAALIGRGLLPAGEPDLTALNNAFKEQMNGLDLSMNSLKREREEEFEDADGEGDSHVSDTESIDGSDVKPELKETPTSIPSASLQSRISRRKPAAPQWVNPDWQDNMKAGAGAPGGPITGGTGGSDQEVIINGVCVMQQQAADYSRKSGTEETVRIEPTAVQDRFNDDADDDVTSDNEDEDVRGETESQISNKQSESGETNENDENESVPVKQEDCESTGRRSSHDISESKGDDDETPGVWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00424534;
90% Identity
iTF_00424534;
80% Identity
iTF_00424534;