Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_006980735.1
Location
jcf7180002954907:92039-116257[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-24 6.2e-21 74.4 0.0 2 89 46 131 45 131 0.95
2 2 0.67 1.5e+03 -0.5 0.0 30 69 668 707 653 725 0.69

Sequence Information

Coding Sequence
ATGACTACTACTGAGATTAAAGAGGAACCCTGTATTACTGGACCTCCACAGAATGACGATAGCACTAGTAATATTAGCAAAACTGCAAGCGCAAAAAAGTCTGGACGCAATGAGTCCGTATACGACCATCGTGACAAGGAGTCATTTTACAAAGATTTGACAATTTTTCATGAAAATCGGAATACTCCCATTACCAGACTACCTAAAATTAATGGTTTGGAGGTGGATCTCCACAAGCTTTACGGTGAGGTCATTGCTCGAGGTGGATGGCTGAAAGTCAACATTCGAAATGAATGGGATGAGCTGATCTCAGTTTTGGGGCTAAAGCAGAAGTGTGTTAATGCTTCAGTAGCTTTAAAACATATCTACACAAGGTATTTAGACAAGTTCGAAAGGGCGAACTTCTTGGGTGAGGATCCGGACAAGCATGATGAACCTGAGGAAGAGGGTCGCCATAAAAAATGGTCTTCAAAGAGTTTTCATTCAGTGCCTATGACGTATAACTACAGTCAGCACACCATATCCGAGCAACTCAGGGTCATTCATAAATTGTCAACGGATCTCTACAAGGGATCAGAATATGAGAAGCTTATGTTGTCGCTGATGTCTCCTTTACCGAATGAACAGGACTTTGCCATCAATGTATGTACCCTCATGGCCAATGAAAGTAAACACACGTTGAAAATTGATCATTGTCCCAAGCTACTGGATGCCTTGATAGCACACGCAGGAGTTTACTGTCATTTTACTATGAGGGATTTATTTTACGAGCTTTACACAAAAATACGGCGTCATTCCTTGCAGTCATTTTGGAACGATTTACTTCATGATAAACCACAAATATTAGAATTGTCGTATGATGATTATTTTCAATCTCCTGATGAGAAATTTGTTGATGCTGGCGCTGGACGACCGCCATTACGATTGCCGCCAAGAGATTTCTTTCAAGATGGATTGAATGCTACAAGTGACGATATTCGCGCAGAATTTAATAAATTAGATTTTCTGGCATTAGGCCGTGGACTTGGAACACATGATTATATTGGACAAAGGGTTAATCAAGTTGCCTCTATCATAAGAAATTTGAGTTTCTTTGAAGAAAATGCGCAAACATTAGCAAAAAATAGAACGTTTATACGATTTTTAGTTATGTGCTCGAATATTCGTTGGGGAAATATTCACCATATGGCCCTAGACGTGTGTGGTAATATAGCTACAGAAATGGAATTGGCAGATCCAACATCCGATGATCTCACTCGCTGCCTGATGTCAACAATTTGTGAAGGACTAGAAGGTCAGGATAGAGGAGTTATTATAAGCTCTTTGGAAATTCTGTACAAACTTTGTCAGAAGGACAGTAATGAAGAACACATACACAAATGTTTGGATCAGAAAGTTTACAATCAGATTTGTTTGTTTTTGTCATTAAATGATATCATGCTACTGTTATACACATTGGAGTGTATTTACGCGTTGAGTTCGTTGGGGCATAGATCTTGCAATCAGTTAGTTCAAGTGAGAGGTATTGTGGATACATTAGTTTCACTTATAACTGTAGAGGCTCAAAGTTATGGTCCAGATGGCTGCATACTAATGAGAGTGGTTGAAACAGTACCAGGTAATATGTTACCAATGGTGGCGCAAAATATTGCAAAGCTACAAACTGCGGCGATGGCGGGTCAGGTTGGTGACCATCATATACAACAAACAGGAAACACAAATCATCCCGATAATGTGGCCAGTGGTGATTCACAAAAAGAAAATGCTTCGGCATCTGAAAACACTCAGACTAATGCTGCCCCACCACCTGCAAATATTCGTGTAGTACAAACTTCGCAATCAGTTCCAACAAGCTCTGCAACGCAATCACCACAAACGCAGGTGAACGTAACGCCTGCTAAACCGACACAACAGCAATTGACTCAGGAGGCTGAGCAATTCACAGTTTCTTGGCTTGGAGCAAATTTTGAAGTGGTGCCTTCTGTTGCAAGCCGTATTGAACAACAGGATTTATATAAAATGTATTTGGCGGCAGCTCAGAAACATGGACGACGATGTGTAGCTCAAGCTAGTTTTCCTCGTTTAGTGCGAAATACTTTTGGCTTACAGACTGGTCCAACTTTAGTGAAGAGCACAGAACCTAATGGAAATGTAACAAATACCTATTACTATATTCGTATGCGTGCTAGAGCAAACCCATTACCAATGCAAATTAAAACAATAACTGGACACCATTCGCCAAACAATCAAACAATAAATGTTAAAACACCTAAAAGTGGGTCAAAACAAGGTACAAAGCAAAATGAAATAATAATAAAAACCAAACCTGAACTGGGTCAGAAACTCAAACAAACCAAAAAGAGTCAACTGCAGCAACAAAAACAAGCGCAATTAGCGAAAGCACAAGCGCAGTCAGCACAACAAACGGTCCCAACTCAACAATCGCAACAACAGCAACAGCAACAACAACCTATTCAAACACAACAACACTCTATACAAGGCCACACAGCCGTGATACAGCAACAGCAGGCTCAACCCCAGCAAAACGTGATTCCGCAAACTTCTGATAAACTTCCAACAACGCCAAAATTACCTGGAAAAAATATTTTAATCAACAAAACTATAATTACTGCTCCACATCAACCCACTCCTCAAATTGTTGCAGCAAGCCCTGGAGCCGCCGTTATTACCCACACTCCTAATCAAATTGCCGCTGTATCTCAACAGCAACAACAACAGTTGTTTCTACAACAACCTGCAAAAACTGTTGCCGCTATTCAAACTGCAATTGTGACCCCCACGACTGCGAATGGAAATGGTGCTGCCAGTTCTTTAATCAAAAGCCTCCTGGCTAATAAGGTAACACCAACAGCTACTGAAGTATCCGAATCGAATGCGAGTGCAGCTCCAAATAATCCAAGTTGTTTGATTACCCAAAATGTTAATATGCATCAGGTTGCTCAACGACAACATTTACAAAAACAAAAAGAGTTAGCTCAACAACAACAGCAGCCGGTCGTTGTTTCAAATATCAAAGGTCCAAGTGCGATAACTCTGCCGACAACTACAATTAGCGCTCTCGTTAGCAATCCCGTTATCCAATCTACAGCAGTTAAAGTTGGGCAAACCACAATTAAAGCAATTAATGCAAATTCTGTTTTGCCAGCTGCGGTAATTGAAAAGAAAACTTCACAAATTTCTACTGAAAATATAGAGAATGCCTCTTGGGATCCTATGCCACCCTTAATGCCCGTAAGTGGAAACGCTCGCTCTCAAAACACAAATGTTATTATAGGAGTGAGTAGCGAAGACTCGAATTCAACCGGAAACAATTCAGTCGCTTCTAGTATTATAAGCTCAGTACAGGTGAACACTACAGACGACGGAGAAGGATCAGAAATAAGTTTTGAGGGCTTACTTATACCAAAATCGAAGTCAGGAAGTTCATCAGTAATAGAAGATGAAAGTTCAAAGGAATCGATGAACAAATCATCTCATGTGGTTCATGCCAATCAAATGCTGGTAGATTTGTTAGATAAAAAATCACCTGATCCTCCAGTAAATACAGGTATCAAGAGAAAGCTTGAGGACGATAGTATTGATAGCGCCAGTAAAAGACCAGCGTTAGAACTTGAGGCGGGAGACAATGAAGATGAAGAAATGAAAGTAACCCCATCGAAAAATGCAGCAAATCTGTACGCTGAAATGGCAGCATCTATTTTAGAAGATGAGGACTTAGACGAAGAGCCTCAAATTCAACCGCAAATTCCATCACAGCAGCTTCAAACGCAAATCACGCCTCAAACGCTTCCACAAGTTCAAAGTCAGATCCAATCTCAAATTCAAACACAGTTGCAATCTCAAGTACAAACTCAAATACAGACACCTGTTATTCAGAAAACGTCAGACGCTCAGAAACAACTAATAACAATGCCCATGCCCTTACAGCGTCAGATCATCGTAGCACCAAATAGCCCTCATCAAGTAATCCTTTCGCAGGCAGCTGCTGGAAACCAACCGGTGCAAACACAAGCGACCGCTACAATTAAAACTGAGTCCGGGTTGCAAACCGTGCCGTTAATTCTCCAAAAACAAGTTGGTCCTGGCGGGCAACAGATCATACAACCTGTAATTCAATCCTCCCAACCGCAGACTCAATACGTGCTTGCGACAAACCCTCAAGGACAAACATATCTTGTGGCGCAACAACCACAACCAACTCAAACAGTATTAGTTACTCAGACTCCACAGCAGCAAGGTACTCAAAGTAAAACCATCATAATTCTGCAACAGCAAGGCGGCCCTCCACAGGCGGTTGCGGCACAACAGCAAATAATTGGAACAACTGGAACCCCACAGAAAGTTATTATGACTACTCCACAAGGCCAACAAATGATTGTAACGCAAGTGCCTCGGCCCCTACAGCATCAAATTGTAATGAATCATCCGACGACAAGTTCTCTTCAAACAACAGGGTCACAAAATGTAGTTATTTCGCAATCCCAATCCCCTCTCCATCAGCAACATCAAATGCAGCAACACATTCAAGCACAATCTCACCAGCAGATTCAAAAGCATCCTATTCAAATTCAAGCAACGCCTCAAGTTCAAATTCAAAATAATCCACAGCAGCAGCAAAATGAGAAGATTGTTTTGTCACAACTGCCACATATTCCTGCCACTATAAAATTACATCCCCACCAAACACAAAACACTCAAACACAAACAGCTGCAAAAACTTTGCCCACAAAGTCTCCTGTACCACCGCAACAGCCGCCAGTATCAATTGTTGCTCAACAAATTCCACAACAAGCCGCAGTACAACACCAAGCTATGCAGAATCACCCAAAAATTCCAGAACGAAAGCTTCTCATTGCTGGGAATGGGAGCATCGAATTTGCTGAGAGCTCACAACAAGTACCTATTATAGGTTCGGTGACGTCGAGCACTCAGACCGCTATCACGCAACCACAACAGCAACAATCTGCACAATCGCATATGAGTCAACAGATTCCTCAACAAGTTATAACAACCACTACTCCAATGATTGTTAGCCAGCAAACATCAAACATAATTGCTCCACCGCCTCCACCACCGGCGCCTACGAAATCAGCTAAAACGATTGCAGATATAAAATCCGACGAAGAATTAATTGATCCAAATTGGATGTGGGTTTGCGATTGGAGGAATTGCCCAAGGAAAAAGTTTAAATCATTAAATGATGTCTATCGTCACGCGTGCCTGGTGCATTGCCCAGAGTCTTTGGATCCGAGTGCCGAGATATACTGTCAGTGGGGTCCAGGACCAGGTTTGTGCGATAATATTCCTCGAAAGAGGTTTTCTTTGATGACGCATTTACTAGATCGTCATTGCACTCCTGAGGCATTTAAAGCTGCAGTTCAGAGGCGCCTTGTTACAGGCATACAACCTAGTGTTCATACACAGCCTGTAACTATCATAAAAAATGCACAAACACCATCTACAGCCTCAGAAGGGAAAGGTACATCCTCGCCTGCACTTTCTACATCTTCTACTAGTTCTTTACCACCGGCAGCTAGTGCTGCAATGCATGCAATCAAAAGGCACACAGCTGATTTTTCCAATCCAAAAGAATTAATGGATGAAAATGAAGGCCCGGTTACGAAAAGTATTCGACTTACTGCAGCGCTGATATTAAGAAACTTGGTGACATATACTTCGACCGCTAAAAGGAATGTTCGCTGCTATGAACCCCACTTAGCTGGTGTAGCCTTAAGTAATGTCGAGTCCAGCCAAGCTATTTCTCAAATTTTGTACGAAATGAACAACTAG
Protein Sequence
MTTTEIKEEPCITGPPQNDDSTSNISKTASAKKSGRNESVYDHRDKESFYKDLTIFHENRNTPITRLPKINGLEVDLHKLYGEVIARGGWLKVNIRNEWDELISVLGLKQKCVNASVALKHIYTRYLDKFERANFLGEDPDKHDEPEEEGRHKKWSSKSFHSVPMTYNYSQHTISEQLRVIHKLSTDLYKGSEYEKLMLSLMSPLPNEQDFAINVCTLMANESKHTLKIDHCPKLLDALIAHAGVYCHFTMRDLFYELYTKIRRHSLQSFWNDLLHDKPQILELSYDDYFQSPDEKFVDAGAGRPPLRLPPRDFFQDGLNATSDDIRAEFNKLDFLALGRGLGTHDYIGQRVNQVASIIRNLSFFEENAQTLAKNRTFIRFLVMCSNIRWGNIHHMALDVCGNIATEMELADPTSDDLTRCLMSTICEGLEGQDRGVIISSLEILYKLCQKDSNEEHIHKCLDQKVYNQICLFLSLNDIMLLLYTLECIYALSSLGHRSCNQLVQVRGIVDTLVSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIAKLQTAAMAGQVGDHHIQQTGNTNHPDNVASGDSQKENASASENTQTNAAPPPANIRVVQTSQSVPTSSATQSPQTQVNVTPAKPTQQQLTQEAEQFTVSWLGANFEVVPSVASRIEQQDLYKMYLAAAQKHGRRCVAQASFPRLVRNTFGLQTGPTLVKSTEPNGNVTNTYYYIRMRARANPLPMQIKTITGHHSPNNQTINVKTPKSGSKQGTKQNEIIIKTKPELGQKLKQTKKSQLQQQKQAQLAKAQAQSAQQTVPTQQSQQQQQQQQPIQTQQHSIQGHTAVIQQQQAQPQQNVIPQTSDKLPTTPKLPGKNILINKTIITAPHQPTPQIVAASPGAAVITHTPNQIAAVSQQQQQQLFLQQPAKTVAAIQTAIVTPTTANGNGAASSLIKSLLANKVTPTATEVSESNASAAPNNPSCLITQNVNMHQVAQRQHLQKQKELAQQQQQPVVVSNIKGPSAITLPTTTISALVSNPVIQSTAVKVGQTTIKAINANSVLPAAVIEKKTSQISTENIENASWDPMPPLMPVSGNARSQNTNVIIGVSSEDSNSTGNNSVASSIISSVQVNTTDDGEGSEISFEGLLIPKSKSGSSSVIEDESSKESMNKSSHVVHANQMLVDLLDKKSPDPPVNTGIKRKLEDDSIDSASKRPALELEAGDNEDEEMKVTPSKNAANLYAEMAASILEDEDLDEEPQIQPQIPSQQLQTQITPQTLPQVQSQIQSQIQTQLQSQVQTQIQTPVIQKTSDAQKQLITMPMPLQRQIIVAPNSPHQVILSQAAAGNQPVQTQATATIKTESGLQTVPLILQKQVGPGGQQIIQPVIQSSQPQTQYVLATNPQGQTYLVAQQPQPTQTVLVTQTPQQQGTQSKTIIILQQQGGPPQAVAAQQQIIGTTGTPQKVIMTTPQGQQMIVTQVPRPLQHQIVMNHPTTSSLQTTGSQNVVISQSQSPLHQQHQMQQHIQAQSHQQIQKHPIQIQATPQVQIQNNPQQQQNEKIVLSQLPHIPATIKLHPHQTQNTQTQTAAKTLPTKSPVPPQQPPVSIVAQQIPQQAAVQHQAMQNHPKIPERKLLIAGNGSIEFAESSQQVPIIGSVTSSTQTAITQPQQQQSAQSHMSQQIPQQVITTTTPMIVSQQTSNIIAPPPPPPAPTKSAKTIADIKSDEELIDPNWMWVCDWRNCPRKKFKSLNDVYRHACLVHCPESLDPSAEIYCQWGPGPGLCDNIPRKRFSLMTHLLDRHCTPEAFKAAVQRRLVTGIQPSVHTQPVTIIKNAQTPSTASEGKGTSSPALSTSSTSSLPPAASAAMHAIKRHTADFSNPKELMDENEGPVTKSIRLTAALILRNLVTYTSTAKRNVRCYEPHLAGVALSNVESSQAISQILYEMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-