Dhel001579.1
Basic Information
- Insect
- Dastarcus helophoroides
- Gene Symbol
- nfxl1
- Assembly
- GCA_028583605.1
- Location
- CM053325.1:24816416-24823560[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.5 2.6e+04 -3.7 1.5 15 19 158 162 157 162 0.81 2 22 0.13 2.3e+03 -0.3 0.4 4 10 193 199 192 199 0.95 3 22 1.4e-07 0.0025 18.8 17.3 1 19 207 224 207 224 0.99 4 22 1.1 2.1e+04 -3.3 0.9 6 10 250 254 249 254 0.83 5 22 2.1e-09 3.8e-05 24.6 13.0 1 19 260 278 260 278 0.98 6 22 0.61 1.1e+04 -2.5 0.2 5 10 302 307 302 309 0.89 7 22 5.9e-08 0.0011 19.9 12.8 1 19 314 332 307 332 0.89 8 22 2 3.6e+04 -5.4 2.2 14 18 340 344 340 344 0.70 9 22 0.42 7.6e+03 -2.0 1.5 5 10 356 361 356 361 0.94 10 22 0.0023 42 5.3 11.4 1 18 367 384 367 385 0.93 11 22 0.3 5.3e+03 -1.5 0.5 1 4 394 397 394 398 0.89 12 22 1.4e-06 0.024 15.6 18.8 1 18 419 436 419 437 0.97 13 22 5.4e-10 9.8e-06 26.5 11.0 1 18 446 463 446 464 0.97 14 22 0.42 7.6e+03 -1.9 1.0 5 10 492 497 492 497 0.94 15 22 0.0002 3.5 8.7 6.7 8 19 511 522 510 522 0.88 16 22 0.00028 5 8.2 6.5 1 12 531 541 531 541 0.96 17 22 2 3.6e+04 -4.7 3.5 14 19 569 574 569 574 0.86 18 22 0.34 6.2e+03 -1.7 1.2 6 10 600 604 599 604 0.85 19 22 1e-05 0.18 12.8 5.9 1 11 610 620 610 621 0.96 20 22 2 3.6e+04 -4.1 3.2 5 10 637 642 635 642 0.87 21 22 5.4e-06 0.098 13.7 15.7 4 18 652 666 650 667 0.93 22 22 3.6e-06 0.065 14.2 10.2 1 16 710 724 710 730 0.93
Sequence Information
- Coding Sequence
- atggATAAGCCACCTTTAAATGCTTGGACTTCTAAACGTGGTTCCTCCCAATCACATTCGAACCAAAAGTCAAATAAAGGGCATGGTCAAGAAAAGAAATTTCATGAAACTCGTTTGAAGTTGCAACAAGCTGTTCAGAAGTGCACCAACTATGATTCTTCGTCAGACGAAGATGAAATTGAATACACATCAGTAATCGAAACTGTTGTAAAGTCTTATAATAAAACATTAGGATCTGATTCAAAGTTTGAACGAActgaaaaatttctacaagatgCTTTTATAACTGGAGCCATAACTTGCCTTATATGCATTTCAAGGGTACGACGAGATGATCAGatttgGAGTTGCACTGAATGTTATTGTTTCTTCCATTTGAACTGCATTCAAAAGTGGTCAAAAGATTCGTtggtttatcaaaaaaattcattggAAAATGGCAATTCGAATTTACGAGAACTTTTATGGAGTTGTCCCAAATGTCGTCATGGCTACTCAGCAGAAGAGTTGCCTAGCACATACCTGtgtttttgcagaaaaaatataaatcctAAATATCATAGCTTACTGGTACCACATTCATGTGGAGAAATCTGCAAGAAGGAATTAACACCAAAATGTGGCCATCAGTGCCTTTTACTATGTCATCCAGgccCATGCCCTCCTTGTCCTGTAACTGTATCTGTGTCATGTTACTGTGCTGGTCAACCTCCTGTAATGCGAAGATGTAGCGATAAATTCTGGTCATGTTCAAAACCTtgcaaaaaactattaaaatgtGGGAAACATTACTGTCCCGAAGTGTGTCATCCAGGAGATTGCAAAAGTTGTTCAAAGAAGAGCGTACAAAAGTGTATTTGCGGTTCTCAGCAGAAATTAAGGGAATGTGCTGATATTGTATGGAAATGTGATAAGATTTGTGGCAAGAAGTTAGTGGACTGTGACATTCATACGTGCGAAAAAGTTTGTCATATTGGAGAATGTGGTCCTTGTAAGCTATCAGAGCCAAGAGTATGCCCTTGTGGAAAGTGTATATTTCATTTAGCTTGCACAGAAGAAACACCAACTTGTCAAGATACATGTGAGAAATTATTAGATTGTTGCTTACATTATTGTGCATCAAAATGCCACAGAGACGAATGTGGAGCGTGTTTAGAAATAATAACAAAGAACTGTCGATGTGGACAACATTCAAAGGAGATTCAGTGCTCTAAACAGTATTTGTGTGAAAGcaaatgcaaaaaaattcgTGATTGTGGAAAACATCCTTGTAATAAAAAGtgCTGTGACGGCAATTGCCCACCATGTGAGAAAGTTTGCGGAAAACCTTTACAGTGTGGAAATCATAAGTGCCTATCTGTTTGCCACCGTGGACCGTGCTTCCCTTGCAATTTAAAAGAAGTTGTAAATTGTTTTTGTGGTAGCACTAAAATCACTGTACCATGTggaagaaaacaaaaaacaaaaccacCAAAATGCAATGAACTTTGcagGACACCACCAGATTGTCACCACGATAGGAGATCAGAACATAAATGCCACTTTGGTGAATGCCCtccttgtaaaaaaaaatgtgataaaaaattaaactgcgGCCATAGCTGCAGTTCTGTGTGTCATTCGGCAGTGTTAGTTAAGATAGAAACGAAAAAAGCCACTATGCCTTGGGAGCAAACCAGTCCACAAGTAGAAAAAAAGGCATTACCTTGTCCTGAttgtaaaatttctgttttggtTACTTGTTTAGgaGAACATGAAACGGTTGAATGGCCTTGTTATTTGTCGGAACCTTCTAGTTGTCAGAGACCTTGTGGTAGAATGTTACTTTGTGGAAATCACAAATGTACATTACCATGCCATGTTGTTGAGAACTCTAAAAATGAATTCGAGGCTGGAAGTAATTGTAGCAAATGTGAAAATATCTGTGAAAAGAATAGACCTGAAGGATGCTTACATTCCTGCCCCTTACCTTGTCATAATGGACCATGCCCTCCTTGCAATCATATGGTTCGAATCAAGTGTTTCTGTGGTTTAACCCAACCTTATATTCCATGTCATCAATGGACCTCTAAGGAAGACAAAGAAAAGTTACAAAGCTGTGGTAATCAATGTCcaaaaaatTACCCTTGTGGTCATAGATGTCGAAGTAACTGCCATTCTGGAGAGTGTCCAAATGCGAATCTATGTAAAAAGAAGGTTAAGGTATACTGTATAtgtaaaagaataaaaaaagagtttcctTGTGATGCAGTTAGAAGCAACAACATTCAAGTTCAGTGCGACGATTTGTGTTTGaaacaaaaagaagaagaaaagaaaaagtatGAATTGCTATTGGAACAGCAAAAACTTATTAACGAATCGAAAAATAAAGAGGAGTTACGAAAGTATGAGAAGCTctttgaaggaaaaaagaaatataaggAGAGACGAAATGTTGTTAATCTGGAACATAAGTCTTATATGCAAGAATATAAAATACTTCTGATTTCTGCTACAGCAAGTTTTGCTgcatttatattatttattatgttAAGTAGTTAA
- Protein Sequence
- MDKPPLNAWTSKRGSSQSHSNQKSNKGHGQEKKFHETRLKLQQAVQKCTNYDSSSDEDEIEYTSVIETVVKSYNKTLGSDSKFERTEKFLQDAFITGAITCLICISRVRRDDQIWSCTECYCFFHLNCIQKWSKDSLVYQKNSLENGNSNLRELLWSCPKCRHGYSAEELPSTYLCFCRKNINPKYHSLLVPHSCGEICKKELTPKCGHQCLLLCHPGPCPPCPVTVSVSCYCAGQPPVMRRCSDKFWSCSKPCKKLLKCGKHYCPEVCHPGDCKSCSKKSVQKCICGSQQKLRECADIVWKCDKICGKKLVDCDIHTCEKVCHIGECGPCKLSEPRVCPCGKCIFHLACTEETPTCQDTCEKLLDCCLHYCASKCHRDECGACLEIITKNCRCGQHSKEIQCSKQYLCESKCKKIRDCGKHPCNKKCCDGNCPPCEKVCGKPLQCGNHKCLSVCHRGPCFPCNLKEVVNCFCGSTKITVPCGRKQKTKPPKCNELCRTPPDCHHDRRSEHKCHFGECPPCKKKCDKKLNCGHSCSSVCHSAVLVKIETKKATMPWEQTSPQVEKKALPCPDCKISVLVTCLGEHETVEWPCYLSEPSSCQRPCGRMLLCGNHKCTLPCHVVENSKNEFEAGSNCSKCENICEKNRPEGCLHSCPLPCHNGPCPPCNHMVRIKCFCGLTQPYIPCHQWTSKEDKEKLQSCGNQCPKNYPCGHRCRSNCHSGECPNANLCKKKVKVYCICKRIKKEFPCDAVRSNNIQVQCDDLCLKQKEEEKKKYELLLEQQKLINESKNKEELRKYEKLFEGKKKYKERRNVVNLEHKSYMQEYKILLISATASFAAFILFIMLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -