Basic Information

Gene Symbol
ZFHX4
Assembly
GCA_028583605.1
Location
CM053325.1:10402728-10411520[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.85 1.1e+02 4.5 0.2 2 23 155 177 154 177 0.90
2 18 0.00018 0.025 16.0 1.8 2 23 328 350 327 350 0.95
3 18 4.6e-05 0.0061 17.9 0.7 1 23 382 406 382 406 0.92
4 18 0.0066 0.89 11.1 0.4 1 22 448 469 448 472 0.91
5 18 9 1.2e+03 1.2 4.2 1 20 617 636 617 641 0.89
6 18 4 5.4e+02 2.4 0.2 2 20 674 692 673 697 0.91
7 18 1.6 2.2e+02 3.6 0.6 1 23 722 746 722 746 0.90
8 18 9.7 1.3e+03 1.1 1.2 1 22 826 847 826 849 0.78
9 18 0.00096 0.13 13.7 0.2 1 23 859 882 859 882 0.96
10 18 0.018 2.4 9.7 2.9 2 22 964 984 964 987 0.90
11 18 0.13 17 7.1 2.1 1 23 999 1024 999 1024 0.90
12 18 0.0031 0.42 12.1 1.6 1 23 1042 1064 1042 1064 0.97
13 18 0.00068 0.092 14.2 0.7 2 23 1071 1093 1070 1093 0.94
14 18 0.00018 0.024 16.0 3.1 1 23 1200 1224 1200 1224 0.92
15 18 0.0053 0.72 11.4 0.6 1 22 1244 1265 1244 1268 0.89
16 18 0.0011 0.14 13.6 0.2 1 23 1317 1341 1317 1341 0.93
17 18 0.0015 0.2 13.2 0.0 3 21 1406 1424 1404 1425 0.94
18 18 0.32 43 5.8 2.5 2 19 1551 1568 1550 1573 0.90

Sequence Information

Coding Sequence
ATGCCCACTCTGTCCGCGGCGCCTGAAGTGAGTCCCGGCGGCCGCAACGAGCGGCAGAAGACCCACAGCGTCGCAATGAGTCCCGAGCAAGAAGCCAGCCCCCCTCCGGCGGCTCCGGGCGCGTCGCCGCCGCCTCAGCCGCCCACGAGACTGCCCTCGCCCGTCACCTCCAACACGCCGCTGGGGGACAACTCGGACGTGGAGCAGTTCTCCGGCAAAATCGTCTACAACCCGGACGGTTCGGCCTACATCATCGAGGACTCAGAAACCAGCGACAACGAGAGCCACCAGATGCCGACGGCGCCCGAAGTGGTGCCGCCCCTGCAGGCCGTTTACGTGTCGCGGTTGCTGCGTCAAACCGCCCGCGCCGCCGACTTGCCGGCAGTGCATAGCTATCGCGTGGTATCGCTTAGGGACGCTCGACCTCCAAGACCCGCGTCGGTGCCCATAAAACCCATCCTCATGTGCTTCGTGTGTAAGCTGAGTTTCGGTTTCGCTAGATCTTTCGCGAATCACGCCCAAGCGGAACACGCGGTGTCGTTGAAGGAAACGGAAAAGGAAGTGTTGGCGGCCGATTGTTCGGCCATCTTGCAGTGCGTGGGTGCCGACAAGAGGCCGGTCGTTTCGCTTTTGGAACCGTTGGGGCCGACGGCGCCATCTCCAGACAATCACACAGGATCTCAGAACACGATGCCAGTTATTAGTAGTAGAAGCGACGAGCACCAGTCTCATCTCGCCAACACCGAAAACCAAACCCCCCCGGGATCGTCCATACGTACGGCGCCGGGGAAATCACCTTCGCCACCTTTCGCCCCACCACCGACGTTTATGACGGGCACGACGATCGGCGTTTGTCCGGAACATCTTCAGGGAAGACCGTCGGGAGTAGACTGTGCGCGCTGCGAAATGATACTCGCATCGGGTCGTCTCGGACCCGCAGGACTTGCGAACGTACACAGTCGAAATTCGTGTAAAACTTTAAAGTGTCCCAAGTGCAACTGGCATTACAAATATCAAGAAACTTTAGAAATACATATGAAAGAAAAACACCCGGAGGCTGAAACTAGTTGTATATATTGTATAGCAGGTCAACCGCATCCTCGGTTAGCCCGCGGGGAGACCTACACCTGCGGCTATAAACCTTACCGATGTGAAGTGTGCAATTACTCCACAACCACCAAAGGTAATCTCAGTATTCACATGCAGTCCGACAAACACCTCAACAACATGCAGGAAATACAAAACGGCGGCGGTCCTAACACCGAAGCCAGGCAAGCATCGCCAAAAGCCCCATCTTTGCATCATTCTCCGGTGAGCAGCGGCCATAAACCCAAACACAGCTTTAGATGCGAAGTTTGCAATTACGAAACGAACGTCGCCCGCAATCTCAGGATACACATGACATCGGAGAAACATACGCACAACATACTAGTTCTACAGCAGAACGTCAAACACATGCAAACGTTATCGGCGCTACACCATCAACCCCACGCCGCCCAACAACACATGGAAAGCCTCTACGGAATGTACCCCGGACTGGGAGACAAACCGGAGGCGGCCCTCGCCGACATGGCTTACAATCAAGCCTTGCTCATCCAAATGATGACAGGAGGCCAAATCCCCGGCCACACCGGCCCCGCCGATATGACCTCCCACGCCGACATGGGCCTCAACCCGGAAACCATGGAACCTCCTCCGGAACCAGCGGACCCGGACCCGGACCGAATATTCCAATGCTGCGTCTGCAACATCTTCTCGACGGATAGCCTAGAAGATCTCGGAAGACACCTGGCGCAAGACAGGACGAGACTGCGAGAACAAGAAATCCTCGCCGTAGTAGCGGGCCACTACGTCTGCAAACTCTGTACCTACAAGACTAACCTAAAGGCCAACTTCCAATTACACTGCAAGACTGACAAACACCTCCAACGGCTGCAACACGTCAACCACGTCAAAGAAGGAGGACCTCGCAACGAGTGGAAATTGAAGTACGCTTCGGCGCCTGGAGGAGTACAAATCCGATGTAACGCTTGTGATTATTATACGAATTCCGCGCACAAACTGCAGCTGCACGCGGCCGCCGGCCGTCACGACGCCGGCATCGCCCTCCTCAAACATCTGTGCGAACGGTGTTCGACGCTGAGGCCTGACCAACCGCGAGTTTTTCACTGTTCCTTGTGCGGCTTTTCCGCAGCCAACAGACTACCTCTACTGCAGCACGTCCGATCGCTGAAGCACCTCCATATGGAGCAGCTGCATCAGCTGCAGAGGCGAGCGGAGGGGAAGGACACGTCGCCGGAGATCGGGGAGGTTTTCCACGTGGTTCCGGCGCCGACGGAACAACAAACGCCCGAACGACGAGACAGCGTTAACTCAGAAATCAGCCAAGCTGACTCCAACAGAGACAACAGCGTCAAATGCGAACCGCACGAAGACAACGAAGACGCGAACAACTCCGATATGGGCTCCCCCCAGCACTGTTGCCCATACTGCGAATACACGAGCGACTCCGAGATGCGAATACAAGCTCACGTCTTGGCCCAACACAACACCCACTCGTCCAGCAACCACCTATTCCAATGTCCCTTGTGCCAAGACGCCTTCAAAGAGCGATCCAGCCTTGAGCGTCACGTCATGCAAATTCACTCGGTAAACAGCGAAGGCCTCCAACGGTTGCTGATGCTGGTGGATCAAAGTCACTGGTTGAACCAGGCGTCGCGCACCCCTACCCCCAATAATCCCAACAACCAATTGCCACAGACCGTTTCTCCCAATTCCGTATCATCTAAAGACTCTAATAAAATGGAGAAGAGCGATATGAGCAACTTGGATTTAGAGCGAGATCTGATGTCGCCGTCGAGCGACGATAATTTCGAACAAGAGGCGGAACGGTGCAGCACTTGCTTCAAGacgtttaaaaatatcgacgaGCTGTGTTATCATCAGAACGAGACCGGGCATTTGGAGATAAAACAAACGCCTAGCGGTCCTGGCTACATGTGCTGGAAAAAAGGTTGTAATCAATTTTTTCCGACCGCGCACACCTTGCAAATGCATTTTAAAGATTCACACGCCAAAAATTCGATTACGAATATGTCAGTGTCCGAGAAACACGTTTACAAGTATCGGTGTAATCAGTGCTCTTTGGCATTTAAGACTTTGGAGAAACTGCAGTTGCATTCGCAGTATCATATGATTAGAGACGCTACAAAGTGCGTTTTGTGCGGAAGGAGTTTTAGATCTTTGGTTGCGTTGCATAAACACGTAGAGAGCGTTCATTCGGAACTAACCGACGAAGAACTGAACGCTTACAAGCAAAGTCTGATGAATAATCCTCTGTTATTGGCGGGTCTACAAGGGCAAGTGTTAGATAGTTCGACtaacgaaattctaaaaaaagaatcaTTACGTAACGATGATACTGATATGACAGACTGCGATGAGAGTAAAGAACTGAATACTAGTCATGATGATAATAATCAAAATGATGGCGAAAATTCCGACGATAGTATTATTTATAAAGACCAACAATTCTTGGAAGATTACCTGAATAGTCAAGCGATCGCGGAGGACAGCTACAACGACCCCAATAGAAAATACAAATGCCACCGCTGTAAAGTGGCATTCACCAGGCAAAGCTATTTGACTGCCCATAATAAAACCCTTCTTCATAGAAAGGGAGAGAAACTCAGCTACCCGATGGAAAAGTACCTAGATCCGAATAGACCCTACAAATGCGACGTTTGCAAAGAAAGTTTCACGCAAAAGAATATCCTTCTCGTCCATTACAATTCGGTTAGTCATCTACACAAATTAAAGAGAGCGATGCAAGAACAACAAAATAACAACAATAACCCTCCGGTGTCGCCCGTCATCGGCAGCGGTCAACCCCAAAACATGACGCTAACGCCTAAAAGTTCATCTTCCGAGGAAGACGAAAAGAAACGGTACCGATGCAACATCTGCAAAGTGGCCTACACCCAGGGCAGCACCCTGGACATTCACATGAGAAGCGTCCTTCATCAAACGAGGGCCAGCAAATTACAAGACTTAGCGATGGCCGGTCAAATCGACCTGTCCAAGCCGCTAATCGAGCAACCCGAGGCCATGCAGTCTCCGAAGCAAAGCAGCCCCGCACCCGGTAGTGGGGACAAAGCGTCTCCCACCCCGGTTTCATCACCACCGAATGCAGGTAACAATCAAGGGATGATGGCCTGCCCCAAGTGTGGCGCCCTATTCACGTCACAAGACCAGTTGAGTGCACACCAGCAGCTGTATTGCATGTTCGCCTCGCCTATGGGCATTTTTCAAACGGCCCAGGAACCCGGCCAGGCCAAGAGTCCACCGCCTTCGGGCGGCAGCGAGCAGGACTCGTCCGCCGCCGTCAGACTGAACATACCGAAGAAAAACACCTCGCAAATGTACAAGCACTTACTAGAAAGTTTCGGATTTGACCTCGTGATGCAATACAATGAAAGCCACCAAAGAAGACATCTGCAGAAGTTGCGCGAAGCGGCAGAAGAGAAGGCGGGCGATCCAGGAAGTCCTCCCAGGGCGCCACAAGCGGCGACTGAGCCCACCAAGGCCCCGGAGGAGCCCAAAGCCCAAGAGGAGGAACCGGACACCAGCCTTCCCGAAGTAAGTAAATCCACCTGCCAACATTGCAATAAAGAATTCTCTAGCGTGTGGGTGTTAAAATCACACTGTGAAGAAGTACATAAAGATTTAGTGCCGCTCGAATTCTTAGAAAAGTATGCTCAACAGTTCAAAAACGATTACGAAAAGAAAACCGTGGTGGTGACCTCCGCAACCTCATCGACCCTTAACAGTCAACCGTGCGTCACCACGCCCCAATCCACCGCCAGCCCAAACGAACAAGACAAAGAAGATCAACTAGACACTAAACCTCAACAAGAAACCGCCGCCTCTACGGCCCCATCGACTCCCACCTCGTCCACGACGCCCGTCAGCACGACAGAAACCCCAGCCCTTCCCGCCAACATCCAGGCGATGATCGCCCAAACCATGGCCCAAAATCCGATGGCTCTCGCACAACAAATGTCCGAAATGCAAGCCGCCTTCAACGTTATGCAACTGCAACAGCTCAACTTCAATCCGATGATGCAGATGATGGGCATGGGACTACCGCTGGGACTCAACGCTTTGGCGGCCATGAACCTGCAGCCGCCGCTCGTGCCTTTGATGATGCCGCCGCCACCCTACGATCCCATGACGCAGTTCGGCCCCCAAGATCAACAGATAATCAACAAGCAACAGGCTCTGATGCAGCAACAAGCGGTGAGTGTtctttatttattcatttag
Protein Sequence
MPTLSAAPEVSPGGRNERQKTHSVAMSPEQEASPPPAAPGASPPPQPPTRLPSPVTSNTPLGDNSDVEQFSGKIVYNPDGSAYIIEDSETSDNESHQMPTAPEVVPPLQAVYVSRLLRQTARAADLPAVHSYRVVSLRDARPPRPASVPIKPILMCFVCKLSFGFARSFANHAQAEHAVSLKETEKEVLAADCSAILQCVGADKRPVVSLLEPLGPTAPSPDNHTGSQNTMPVISSRSDEHQSHLANTENQTPPGSSIRTAPGKSPSPPFAPPPTFMTGTTIGVCPEHLQGRPSGVDCARCEMILASGRLGPAGLANVHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPEAETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQEIQNGGGPNTEARQASPKAPSLHHSPVSSGHKPKHSFRCEVCNYETNVARNLRIHMTSEKHTHNILVLQQNVKHMQTLSALHHQPHAAQQHMESLYGMYPGLGDKPEAALADMAYNQALLIQMMTGGQIPGHTGPADMTSHADMGLNPETMEPPPEPADPDPDRIFQCCVCNIFSTDSLEDLGRHLAQDRTRLREQEILAVVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKYASAPGGVQIRCNACDYYTNSAHKLQLHAAAGRHDAGIALLKHLCERCSTLRPDQPRVFHCSLCGFSAANRLPLLQHVRSLKHLHMEQLHQLQRRAEGKDTSPEIGEVFHVVPAPTEQQTPERRDSVNSEISQADSNRDNSVKCEPHEDNEDANNSDMGSPQHCCPYCEYTSDSEMRIQAHVLAQHNTHSSSNHLFQCPLCQDAFKERSSLERHVMQIHSVNSEGLQRLLMLVDQSHWLNQASRTPTPNNPNNQLPQTVSPNSVSSKDSNKMEKSDMSNLDLERDLMSPSSDDNFEQEAERCSTCFKTFKNIDELCYHQNETGHLEIKQTPSGPGYMCWKKGCNQFFPTAHTLQMHFKDSHAKNSITNMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHMIRDATKCVLCGRSFRSLVALHKHVESVHSELTDEELNAYKQSLMNNPLLLAGLQGQVLDSSTNEILKKESLRNDDTDMTDCDESKELNTSHDDNNQNDGENSDDSIIYKDQQFLEDYLNSQAIAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNNPPVSPVIGSGQPQNMTLTPKSSSSEEDEKKRYRCNICKVAYTQGSTLDIHMRSVLHQTRASKLQDLAMAGQIDLSKPLIEQPEAMQSPKQSSPAPGSGDKASPTPVSSPPNAGNNQGMMACPKCGALFTSQDQLSAHQQLYCMFASPMGIFQTAQEPGQAKSPPPSGGSEQDSSAAVRLNIPKKNTSQMYKHLLESFGFDLVMQYNESHQRRHLQKLREAAEEKAGDPGSPPRAPQAATEPTKAPEEPKAQEEEPDTSLPEVSKSTCQHCNKEFSSVWVLKSHCEEVHKDLVPLEFLEKYAQQFKNDYEKKTVVVTSATSSTLNSQPCVTTPQSTASPNEQDKEDQLDTKPQQETAASTAPSTPTSSTTPVSTTETPALPANIQAMIAQTMAQNPMALAQQMSEMQAAFNVMQLQQLNFNPMMQMMGMGLPLGLNALAAMNLQPPLVPLMMPPPPYDPMTQFGPQDQQIINKQQALMQQQAVSVLYLFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00369792;
90% Identity
-
80% Identity
-