Basic Information

Gene Symbol
-
Assembly
GCA_028583605.1
Location
CM053334.1:27727985-27739977[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7 8.4e+03 -2.0 0.1 37 43 15 21 14 21 0.89
2 2 4.7e-09 8.5e-06 26.8 0.2 3 44 155 195 154 197 0.94

Sequence Information

Coding Sequence
ATGTTGAATACACGTATGAAGTACGCGAACATTTTCGAGGGTAATTGCCGAGAAAGGTGGAATATCAAGAGGGAAGGGGGGGATGAGAAGGACAAATCAATTCAAGGTAGCTGCATAGTGTGCAATGCCCAGTTGGGGGCGCATCTCCAGTCCAGACCGTTGGCGCCCAAGAACGCCTCCCAGTACGGTCTCCGCGAAGATCAAGTGCCTCCTAATGGCAGAGTGTGCAATACATGTCGGTGCAAAAGTGTCAGGTCCAGATACACGCATTGTCCTTTACCCAACTGCCCGAATCCGAGAGGAGGTCGAGTTAAAAGATTGCGGTCTTTTCCTCAACGGCTGCAAGAGTTGCCTCCTGACGTTAAAGAACCGATTTTGGCCGAGTTTAACATCCCGAGCGGAGTGACGAAATGCTGCTCGGCATGTTTTAACCGGATACAACGCAGCCTCGGACCGGTTGAAGAATGGTCTGAGGAAGAAAtcggaaaatttaaaacgttactGACTGAATTGGGAGCGAACTGGCAGCAAGTGGGAGAAAGACTGGGCAAAACATCTCATCAAGTGCGCGCCTTTTATGCCTCCAACCGGAAAAGGCTCAACTTAGAATCCTGTTTGGGGGACAGAAAACCTACTTTAACCGATGAGGAGGAAAGCGGCTCCAGCACATCAAGCTGTGAAGAACCCACCACCATACGGGACAGCAGAGGAGGCGGCGATAATTCGAGCGATACAGCGAGCGCTGCTGAGAACTCCCCACTTCTGATACAACCTACTATGCAGCACGCCGGCATTAAAAAGGAAGATTACGACAGTAGTGCCACCGAAACGGCCGATGAAGCTCAAACACCTGATAACTATCAAGTATCGGCAACAATTACACCGGTGACCGTAAATAGTGGCATGGTTGACAATCAGAATAGACAGAACGCATCGCCTCTTAGCGTTAAAGATCTAGTTTTGAATGTGATCGAGTTTTCGTTAATGAAAACGAAAAATCAACAGGCGCAGAATCCACCTACCAGCGGTATAACACCAActatatcgaatattttaaatcatgATTCAAACGAGGTTACTATTGTGAGCGAATACAACTTGGGTCAACCGCCAACTAGATTAACACAGACCCAACAGAGAAATGATTTAAATATAGCAAAACTTGTAACACCTTTGATTGGGGCCACTATAACACCAGTAACAGTCCCTATTCAACATTCGCAGCAACCTCCTCAAGAACAACTGTCATCTAGAGACGATTTGGTGGTTTTACAAGTACCAGATGGCCGCGAACCGGAAACTTTGGACCTTAGTATTAAAAAACCTCGAGAATTCACCACGCCCCATTCCAAACCTCAACCGCACCGTCAGGATGCTTACATGTACCACCAGGAACGCAAAAGTCCATATATGCGATCGCAGCCTAAAATGCCAAGCCCCAAGTTGGGGAATCCGAACCCTAAAGCCGGCTCGATCACCCTCGGTACTCCTATTATCAATCAGCCTCGCTACGAAGGGTTGTTGAGGCAAATAACAACACCGGATGCGGTCAAAATGGGATCTATCACTCAAGGTACTCCGATACAAATACCTCATGTTCCGGATAAGCGTGGGTACGATTTTTATAAGAAGTATGGAGAAGCTGCGCCTGCGCCTGTTGCCTATTCGAATCCCCACTACCGACAACAGCCATACAATGTTGAGCAACAGATGAGTTCTAGGCAGATTATTATGAATGACTACATTACGTCGCAGCAAATGCTTGGAAGAAGAAACGAAAAACCCCCGTCTCAGTATTATCCCCACCCGAGCAGCCCTCACCGTACTCCACCTCCATCCCAACAAGCTCAGCAGCAGGTTaggcagcagcagcagcagcaacaACAACAGCAACGTCAAGGAGTGATACAACGGCATACTCGTCCTCAGTACTTACCGCCTGGTCACGAAGCTCTTTCTTCATTGGTGGACGTGGCCGTTCAGCAACCGAGTTTGCCTGTACCCAGCTGCCCACCTCCGCAGCATGAAGGATTGGGTAAAACGATGGTGGACAACATCATGGAGCAACCGCACCGCTTTCAAATAATTCAGCAACACCAACAGCAGCAATTACGGCAGCAACAGCAACAACAACAGCAAAGGTTGGAGGAGCAACAGAGGCGAGCGTACCACCACCAACATCAAATGCAACAGCAGCAACAACAGCAAGCCAGACAGCCTCCGCCGCAGAACGTACCTCGAAGTAATGAATCTTCAACGCTGACAGCTGCTAGTTTGATAGATGCTATCATCACACACCAAATTAATCAAACTGCTGAAGGTGGAAGAGGTGGAGAAGTAGTTGCGAACACCAGAGAACCCCCAAGGGCCGGCGATCTTCTCTTCCAAGGTTTTCACAGAGATCCGCCTACGGGACATGAGAATAACGGAGAGAGACCGCCATCTGTAATTAGTGTCGAAATTGATTCCAATCAGGGGGACTCTGTAAGCAAAAATTTAACCGTCAAAGAGCTAACGGACTCCGTTATTAGCCACGACTTCAGTGCGTCTCGCCAACCAGCAAATTACTATCACATGCAGCAGCAACAAGACGAACAGTGGAAGCGCCGTTTGCAGCAACAGCAGCAGCAACAAgttaaagaagaaaaacaacGTTCAGGATCGCGCAACCTGGCGGCGGAAGCGGAAAATACCACGTTGAACCGGTATCGCCCCCTGAGAATAACCACTTGGAGCGAACAGAATTACCGTCGCTATCAAGCGCAACCGCAACCACACATTTCCGCTTTAGATTATATGAAGAATCGTATTGTCGAAGTTATGAGGACCGAAGACGATAAGAAAGAAACTTCGGGGCAGTCTCAAAGTCACCAAGAAAAGGAAAGGACAAGCGTCAGTCCTGGAGACATGGTTATCGACGAGGAAAAGCAGGAAAACGCGGATTATCGTCAAAGTTCCCAACAGCAACAATTTCAGTATCCCTTCGTCCACAAAGATTCGTCAGTGAATGACGTGAACAATGCGGCGGTTCAGAGAAATGAACCGAAACCTCTTCTATCTGCGCAATACGAACCGCTTTCGGACGAGGATTAG
Protein Sequence
MLNTRMKYANIFEGNCRERWNIKREGGDEKDKSIQGSCIVCNAQLGAHLQSRPLAPKNASQYGLREDQVPPNGRVCNTCRCKSVRSRYTHCPLPNCPNPRGGRVKRLRSFPQRLQELPPDVKEPILAEFNIPSGVTKCCSACFNRIQRSLGPVEEWSEEEIGKFKTLLTELGANWQQVGERLGKTSHQVRAFYASNRKRLNLESCLGDRKPTLTDEEESGSSTSSCEEPTTIRDSRGGGDNSSDTASAAENSPLLIQPTMQHAGIKKEDYDSSATETADEAQTPDNYQVSATITPVTVNSGMVDNQNRQNASPLSVKDLVLNVIEFSLMKTKNQQAQNPPTSGITPTISNILNHDSNEVTIVSEYNLGQPPTRLTQTQQRNDLNIAKLVTPLIGATITPVTVPIQHSQQPPQEQLSSRDDLVVLQVPDGREPETLDLSIKKPREFTTPHSKPQPHRQDAYMYHQERKSPYMRSQPKMPSPKLGNPNPKAGSITLGTPIINQPRYEGLLRQITTPDAVKMGSITQGTPIQIPHVPDKRGYDFYKKYGEAAPAPVAYSNPHYRQQPYNVEQQMSSRQIIMNDYITSQQMLGRRNEKPPSQYYPHPSSPHRTPPPSQQAQQQVRQQQQQQQQQQRQGVIQRHTRPQYLPPGHEALSSLVDVAVQQPSLPVPSCPPPQHEGLGKTMVDNIMEQPHRFQIIQQHQQQQLRQQQQQQQQRLEEQQRRAYHHQHQMQQQQQQQARQPPPQNVPRSNESSTLTAASLIDAIITHQINQTAEGGRGGEVVANTREPPRAGDLLFQGFHRDPPTGHENNGERPPSVISVEIDSNQGDSVSKNLTVKELTDSVISHDFSASRQPANYYHMQQQQDEQWKRRLQQQQQQQVKEEKQRSGSRNLAAEAENTTLNRYRPLRITTWSEQNYRRYQAQPQPHISALDYMKNRIVEVMRTEDDKKETSGQSQSHQEKERTSVSPGDMVIDEEKQENADYRQSSQQQQFQYPFVHKDSSVNDVNNAAVQRNEPKPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-