Dhel021513.1
Basic Information
- Insect
- Dastarcus helophoroides
- Gene Symbol
- -
- Assembly
- GCA_028583605.1
- Location
- CM053332.1:29029549-29030091[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-10 2.1e-07 31.5 0.0 4 35 14 46 11 52 0.92
Sequence Information
- Coding Sequence
- atggagaagacgaaaaagaaagaaaaatgggaccaaagtaatttacaaactgcgataaacaatgttttgacaaaaaaaatgagtttgagagaagcttcattgccttataatattccaaaaagcacCTTACATGATAAAATATCGTCATTAAACCGTGGACAAGAAGTGTCGTTGCAACCAAAGTTAGGTAGATTCACTAATACCTTCACATCAAAATACGAAGAACTCTTAGTGCAGCATGTAAAAGATTTATCTAATAGGTGTCTGCCGTtaacaaaacaggaatttttgaagttggcttACGATTTGGCTGAGGCTTTGAAGATCCCTCATCGCTTTAATAAAGAGAAAGGAGCTGCTGGTAAACACTTTTACTACGATTTCATGCGGAGACATCAGGACGTATCGCTGAGATCACCAGAGTCAACAAGCATAATGAGGGCTGTGGGGTTTAACAAACCCCAAGttgatctcttttttaataatcttaacagaatgatgacacaattcaaatttccaatttccacCTTCGAAGATTTATAA
- Protein Sequence
- MEKTKKKEKWDQSNLQTAINNVLTKKMSLREASLPYNIPKSTLHDKISSLNRGQEVSLQPKLGRFTNTFTSKYEELLVQHVKDLSNRCLPLTKQEFLKLAYDLAEALKIPHRFNKEKGAAGKHFYYDFMRRHQDVSLRSPESTSIMRAVGFNKPQVDLFFNNLNRMMTQFKFPISTFEDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00423697;
- 90% Identity
- iTF_00423701; iTF_00423697; iTF_00423692; iTF_00423693; iTF_00423695; iTF_00423703; iTF_00423699; iTF_00423704;
- 80% Identity
- -