Dhel020679.1
Basic Information
- Insect
- Dastarcus helophoroides
- Gene Symbol
- -
- Assembly
- GCA_028583605.1
- Location
- CM053332.1:14364853-14365206[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-11 1.7e-08 35.0 0.0 4 35 14 46 11 53 0.92
Sequence Information
- Coding Sequence
- atggagaagacgaaaaagaaaggaaaatgggaccaaagtaatttacaaactgcgataaacaatgttttgacaaaaaaaatgagtttgagagaagcttcattgcgttataatattccaaaaagcacCTTACATGATAACATATCGTCATTAAACCGTGGACAAGAAGTGTCGTTGCAACCAAAATTAGGTAGATTTACTAATACCTTCACACCAAAATACGAAGAACTCTTAGTGCAGCATGTAAAAGATTTATCTAATAGGTGTCTGCCGTtaacaaaacaggaatttttgaagttggcttacgatttggctgaggctttgaagatccctcatcgctttaataaagagaaatga
- Protein Sequence
- MEKTKKKGKWDQSNLQTAINNVLTKKMSLREASLRYNIPKSTLHDNISSLNRGQEVSLQPKLGRFTNTFTPKYEELLVQHVKDLSNRCLPLTKQEFLKLAYDLAEALKIPHRFNKEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00423688; iTF_00423689; iTF_00709138; iTF_00394361; iTF_01027231; iTF_01027250;
- 90% Identity
- iTF_00423688; iTF_00423689;
- 80% Identity
- -